RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 ZKSCAN4Q969J2 545 aaPredicted RBP4.46□□□□□ -1.7
CCDC7-216ENST00000640058 SENP5Q96HI0 755 aaPredicted RBP4.46□□□□□ -1.7
CCDC7-216ENST00000640058 ABHD8Q96I13 439 aa4.46□□□□□ -1.7
CCDC7-216ENST00000640058 EGLN2Q96KS0 407 aa4.46□□□□□ -1.7
CCDC7-216ENST00000640058 B3GALT5Q9Y2C3 310 aa4.46□□□□□ -1.7
CCDC7-216ENST00000640058 C2CD2Q9Y426 696 aa4.46□□□□□ -1.7
CCDC7-216ENST00000640058 A0A0G2JLW4 131 aa4.45□□□□□ -1.7
CCDC7-216ENST00000640058 A0A0G2JNG1 304 aa4.45□□□□□ -1.7
CCDC7-216ENST00000640058 FAM237BA0A1B0GVD1 139 aa4.45□□□□□ -1.7
CCDC7-216ENST00000640058 A0A1W2PPI3 338 aa4.45□□□□□ -1.7
CCDC7-216ENST00000640058 KANSL1LA0AUZ9 987 aa4.45□□□□□ -1.7
CCDC7-216ENST00000640058 ERI2A8K979 691 aaKnown RBP4.45□□□□□ -1.7
CCDC7-216ENST00000640058 TPD52L2O43399 206 aaKnown RBP4.45□□□□□ -1.7
CCDC7-216ENST00000640058 PLPP2O43688 288 aa4.45□□□□□ -1.7
CCDC7-216ENST00000640058 CD48P09326 243 aa4.45□□□□□ -1.7
CCDC7-216ENST00000640058 PRSS56P0CW18 603 aa4.45□□□□□ -1.7
CCDC7-216ENST00000640058 ERVK-10P10266 1014 aa4.45□□□□□ -1.7
CCDC7-216ENST00000640058 MSH3P20585 1137 aa4.45□□□□□ -1.7
CCDC7-216ENST00000640058 MAP2K2P36507 400 aa4.45□□□□□ -1.7
CCDC7-216ENST00000640058 GNB1P62873 340 aa4.45□□□□□ -1.7
CCDC7-216ENST00000640058 GOLGA8DPQ0D2H9 430 aa4.45□□□□□ -1.7
CCDC7-216ENST00000640058 KIR2DS3Q14952 304 aa4.45□□□□□ -1.7
CCDC7-216ENST00000640058 KIR2DS5Q14953 304 aa4.45□□□□□ -1.7
CCDC7-216ENST00000640058 SLC5A8Q8N695 610 aa4.45□□□□□ -1.7
CCDC7-216ENST00000640058 PAF1Q8N7H5 531 aa4.45□□□□□ -1.7
CCDC7-216ENST00000640058 OR8K5Q8NH50 307 aa4.45□□□□□ -1.7
CCDC7-216ENST00000640058 LRR1Q96L50 414 aa4.45□□□□□ -1.7
CCDC7-216ENST00000640058 MAP7D2Q96T17 732 aa4.45□□□□□ -1.7
CCDC7-216ENST00000640058 PDCL3Q9H2J4 239 aa4.45□□□□□ -1.7
CCDC7-216ENST00000640058 SLC38A7Q9NVC3 462 aa4.45□□□□□ -1.7
CCDC7-216ENST00000640058 LIMA1Q9UHB6 759 aaKnown RBP4.45□□□□□ -1.7
CCDC7-216ENST00000640058 PRAG1Q86YV5 1406 aa4.45□□□□□ -1.7
CCDC7-216ENST00000640058 ANKRD66B4E2M5 251 aa4.44□□□□□ -1.7
CCDC7-216ENST00000640058 CLIC2O15247 247 aa4.44□□□□□ -1.7
CCDC7-216ENST00000640058 BUD23O43709 281 aaKnown RBP4.44□□□□□ -1.7
CCDC7-216ENST00000640058 TSHBP01222 138 aa4.44□□□□□ -1.7
CCDC7-216ENST00000640058 TFAP2AP05549 437 aa4.44□□□□□ -1.7
CCDC7-216ENST00000640058 LIPFP07098 398 aa4.44□□□□□ -1.7
CCDC7-216ENST00000640058 ELF1P32519 619 aa4.44□□□□□ -1.7
CCDC7-216ENST00000640058 CCR9P51686 369 aa4.44□□□□□ -1.7
CCDC7-216ENST00000640058 TAS2R40P59535 323 aa4.44□□□□□ -1.7
CCDC7-216ENST00000640058 MRPS34P82930 218 aaKnown RBP4.44□□□□□ -1.7
CCDC7-216ENST00000640058 PACS1Q6VY07 963 aa4.44□□□□□ -1.7
CCDC7-216ENST00000640058 NOTCH2NLQ7Z3S9 236 aa4.44□□□□□ -1.7
CCDC7-216ENST00000640058 DIS3L2Q8IYB7 885 aaKnown RBP4.44□□□□□ -1.7
CCDC7-216ENST00000640058 FRMD1Q8N878 549 aa4.44□□□□□ -1.7
CCDC7-216ENST00000640058 RDM1Q8NG50 284 aa4.44□□□□□ -1.7
CCDC7-216ENST00000640058 ETNPPLQ8TBG4 499 aa4.44□□□□□ -1.7
CCDC7-216ENST00000640058 ZNF473Q8WTR7 871 aaKnown RBP4.44□□□□□ -1.7
CCDC7-216ENST00000640058 PRMT6Q96LA8 375 aaPredicted RBP4.44□□□□□ -1.7
CCDC7-216ENST00000640058 SLX1AQ9BQ83 275 aa4.44□□□□□ -1.7
CCDC7-216ENST00000640058 MAGIXQ9H6Y5 334 aa4.44□□□□□ -1.7
CCDC7-216ENST00000640058 INTS10Q9NVR2 710 aaKnown RBP4.44□□□□□ -1.7
CCDC7-216ENST00000640058 C9orf78Q9NZ63 289 aaPredicted RBP4.44□□□□□ -1.7
CCDC7-216ENST00000640058 FBXW11Q9UKB1 542 aa4.44□□□□□ -1.7
CCDC7-216ENST00000640058 KCNE2Q9Y6J6 123 aa4.44□□□□□ -1.7
CCDC7-216ENST00000640058 BMP10O95393 424 aa4.43□□□□□ -1.7
CCDC7-216ENST00000640058 RNF224P0DH78 156 aa4.43□□□□□ -1.7
CCDC7-216ENST00000640058 GNAZP19086 355 aa4.43□□□□□ -1.7
CCDC7-216ENST00000640058 PIK3CAP42336 1068 aa4.43□□□□□ -1.7
CCDC7-216ENST00000640058 RGS19P49795 217 aa4.43□□□□□ -1.7
CCDC7-216ENST00000640058 ZBED6P86452 979 aa4.43□□□□□ -1.7
CCDC7-216ENST00000640058 SPOCK1Q08629 439 aa4.43□□□□□ -1.7
CCDC7-216ENST00000640058 MED22Q15528 200 aa4.43□□□□□ -1.7
CCDC7-216ENST00000640058 NAB2Q15742 525 aa4.43□□□□□ -1.7
CCDC7-216ENST00000640058 TSTQ16762 297 aaKnown RBP4.43□□□□□ -1.7
CCDC7-216ENST00000640058 ASPRV1Q53RT3 343 aa4.43□□□□□ -1.7
CCDC7-216ENST00000640058 ZNF790Q6PG37 636 aa4.43□□□□□ -1.7
CCDC7-216ENST00000640058 TRIM58Q8NG06 486 aa4.43□□□□□ -1.7
CCDC7-216ENST00000640058 PSMD1Q99460 953 aa4.43□□□□□ -1.7
CCDC7-216ENST00000640058 RAD21L1Q9H4I0 556 aa4.43□□□□□ -1.7
CCDC7-216ENST00000640058 JMJD4Q9H9V9 463 aa4.43□□□□□ -1.7
CCDC7-216ENST00000640058 RRP7BPQ9NSQ0 103 aa4.43□□□□□ -1.7
CCDC7-216ENST00000640058 MTMR10Q9NXD2 777 aa4.43□□□□□ -1.7
CCDC7-216ENST00000640058 ZBTB43O43298 467 aa4.42□□□□□ -1.7
CCDC7-216ENST00000640058 NDUFS3O75489 264 aa4.42□□□□□ -1.7
CCDC7-216ENST00000640058 GNB3P16520 340 aa4.42□□□□□ -1.7
CCDC7-216ENST00000640058 HOXC8P31273 242 aa4.42□□□□□ -1.7
CCDC7-216ENST00000640058 BSGP35613 385 aa4.42□□□□□ -1.7
CCDC7-216ENST00000640058 GALCP54803 685 aa4.42□□□□□ -1.7
CCDC7-216ENST00000640058 RPS3AP61247 264 aaKnown RBP4.42□□□□□ -1.7
CCDC7-216ENST00000640058 KRT71Q3SY84 523 aa4.42□□□□□ -1.7
CCDC7-216ENST00000640058 NDUFAF5Q5TEU4 345 aa4.42□□□□□ -1.7
CCDC7-216ENST00000640058 ZC2HC1BQ5TFG8 222 aa4.42□□□□□ -1.7
CCDC7-216ENST00000640058 CPLX4Q7Z7G2 160 aa4.42□□□□□ -1.7
CCDC7-216ENST00000640058 MYPOPQ86VE0 399 aaPredicted RBP4.42□□□□□ -1.7
CCDC7-216ENST00000640058 C1orf52Q8N6N3 182 aaKnown RBP4.42□□□□□ -1.7
CCDC7-216ENST00000640058 SLC38A9Q8NBW4 561 aa4.42□□□□□ -1.7
CCDC7-216ENST00000640058 GSDMBQ8TAX9 411 aa4.42□□□□□ -1.7
CCDC7-216ENST00000640058 SEC62Q99442 399 aaKnown RBP4.42□□□□□ -1.7
CCDC7-216ENST00000640058 SEMA6AQ9H2E6 1030 aa4.42□□□□□ -1.7
CCDC7-216ENST00000640058 PDZD7Q9H5P4 517 aa4.42□□□□□ -1.7
CCDC7-216ENST00000640058 APOBEC3GQ9HC16 384 aaKnown RBP4.42□□□□□ -1.7
CCDC7-216ENST00000640058 ZBTB20Q9HC78 741 aaPredicted RBP4.42□□□□□ -1.7
CCDC7-216ENST00000640058 EPB41L5Q9HCM4 733 aa4.42□□□□□ -1.7
CCDC7-216ENST00000640058 ADPRHL2Q9NX46 363 aa4.42□□□□□ -1.7
CCDC7-216ENST00000640058 UBA2Q9UBT2 640 aaPredicted RBP4.42□□□□□ -1.7
CCDC7-216ENST00000640058 ACAD8Q9UKU7 415 aa4.42□□□□□ -1.7
CCDC7-216ENST00000640058 H0YIN7 160 aa4.41□□□□□ -1.7
CCDC7-216ENST00000640058 PLOD2O00469 737 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms