RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 PTERQ96BW5 349 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 FAM210AQ96ND0 272 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 FERD3LQ96RJ6 166 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 TMED9Q9BVK6 235 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 FTHL17Q9BXU8 183 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 EHD4Q9H223 541 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 RXFP1Q9HBX9 757 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 ATP13A1Q9HD20 1204 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 C19orf25Q9UFG5 118 aaPredicted RBP5.98□□□□□ -1.45
SCN1A-212ENST00000636194 TVP23AA6NH52 213 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 FAM196BA6NMK8 535 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 ISM1B1AKI9 464 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 CHL1O00533 1208 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 LILRB5O75023 590 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 VNN2O95498 520 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 TFPTP0C1Z6 253 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 FGFR3P22607 806 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 PRKCHP24723 683 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 LUMP51884 338 aaPredicted RBP5.98□□□□□ -1.45
SCN1A-212ENST00000636194 SLC26A5P58743 744 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 IRF8Q02556 426 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 LIPEQ05469 1076 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 ARL16Q0P5N6 197 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 SMARCB1Q12824 385 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 ZNF155Q12901 538 aaPredicted RBP5.98□□□□□ -1.45
SCN1A-212ENST00000636194 CXorf57Q6NSI4 855 aaKnown RBP5.98□□□□□ -1.45
SCN1A-212ENST00000636194 KCNT2Q6UVM3 1135 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 DNAJC14Q6Y2X3 702 aaPredicted RBP5.98□□□□□ -1.45
SCN1A-212ENST00000636194 C7orf57Q8NEG2 295 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 EZH1Q92800 747 aaPredicted RBP5.98□□□□□ -1.45
SCN1A-212ENST00000636194 FAM136AQ96C01 138 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 WDR24Q96S15 920 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 MUC13Q9H3R2 512 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 ANKEF1Q9NU02 776 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 TMEM184CQ9NVA4 438 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.98□□□□□ -1.45
SCN1A-212ENST00000636194 LCHNA4D1U4 455 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 E9PI62 339 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 H0Y858 1186 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 CABYRO75952 493 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 SLC35G6P0C7Q6 338 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 SLC12A3P55017 1021 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 BNIP3Q12983 259 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 MELKQ14680 651 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 OVOS1Q6IE37 1185 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 CLVS1Q8IUQ0 354 aaPredicted RBP5.97□□□□□ -1.45
SCN1A-212ENST00000636194 CEP97Q8IW35 865 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 CCDC74AQ96AQ1 378 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 TIFAQ96CG3 184 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 TBL1YQ9BQ87 522 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 MTG1Q9BT17 334 aaPredicted RBP5.97□□□□□ -1.45
SCN1A-212ENST00000636194 TREM1Q9NP99 234 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 CCDC167Q9P0B6 97 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 SSU72P8A0A1W2PR75 194 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 NT5C1B-RDH14C9J2C7 533 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 H0Y8G0 127 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 RIPK2O43353 540 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 SLC19A2O60779 497 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 VIPP01282 170 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 LTFP02788 710 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 ITGA5P08648 1049 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 CYP2B6P20813 491 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 GLP1RP43220 463 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 MAGEA11P43364 429 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 RAB5CP51148 216 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 MAPK12P53778 367 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 LAPTM5Q13571 262 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 ZNF268Q14587 947 aaPredicted RBP5.97□□□□□ -1.45
SCN1A-212ENST00000636194 DPYSL2Q16555 572 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 PLEKHG6Q3KR16 790 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 TIGD2Q4W5G0 525 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 ZNF311Q5JNZ3 666 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 COL23A1Q86Y22 540 aaPredicted RBP5.97□□□□□ -1.45
SCN1A-212ENST00000636194 DENND1CQ8IV53 801 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 LIX1LQ8IVB5 337 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 GALNT6Q8NCL4 622 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 ADAMTS15Q8TE58 950 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 SHDQ96IW2 340 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 RBM22Q9NW64 420 aaKnown RBP eCLIP5.97□□□□□ -1.451e-6■■■■■ 27.8
SCN1A-212ENST00000636194 MAP3K19Q56UN5 1328 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 ATP6AP2A0A1C7CYW4 349 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 ATP6AP2O75787 350 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 CELF2O95319 508 aaKnown RBP5.97□□□□□ -1.45
SCN1A-212ENST00000636194 C22orf31O95567 290 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 FCER2P06734 321 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 SLC6A6P31641 620 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 KCNMA1Q12791 1236 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 TRIM28Q13263 835 aaKnown RBP5.97□□□□□ -1.45
SCN1A-212ENST00000636194 MOGSQ13724 837 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 GFOD2Q3B7J2 385 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 MINDY4Q4G0A6 757 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 TMPRSS7Q7RTY8 843 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 SLC26A11Q86WA9 606 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 PGAM4Q8N0Y7 254 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 ZNF366Q8N895 744 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 ASPNQ9BXN1 380 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 DNTTIP1Q9H147 329 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 PHPT1Q9NRX4 125 aaPredicted RBP5.97□□□□□ -1.45
SCN1A-212ENST00000636194 B4GALT7Q9UBV7 327 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 SNX12Q9UMY4 172 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms