RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 MYLKQ15746 1914 aa7.1□□□□□ -1.27
BRCA1-230ENST00000634433 CUL9Q8IWT3 2517 aa7.1□□□□□ -1.27
BRCA1-230ENST00000634433 A0A1W2PQ67 120 aa7.1□□□□□ -1.27
BRCA1-230ENST00000634433 FAM221AA4D161 298 aa7.1□□□□□ -1.27
BRCA1-230ENST00000634433 LCHNA4D1U4 455 aa7.1□□□□□ -1.27
BRCA1-230ENST00000634433 A8MT66 165 aa7.1□□□□□ -1.27
BRCA1-230ENST00000634433 CCL16O15467 120 aa7.1□□□□□ -1.27
BRCA1-230ENST00000634433 TLL1O43897 1013 aa7.1□□□□□ -1.27
BRCA1-230ENST00000634433 XYLBO75191 536 aa7.1□□□□□ -1.27
BRCA1-230ENST00000634433 CHRNGP07510 517 aa7.1□□□□□ -1.27
BRCA1-230ENST00000634433 HNRNPA1P09651 372 aaKnown RBP eCLIP7.1□□□□□ -1.27
BRCA1-230ENST00000634433 PKMP14618 531 aaKnown RBP7.1□□□□□ -1.27
BRCA1-230ENST00000634433 CD1DP15813 335 aa7.1□□□□□ -1.27
BRCA1-230ENST00000634433 SERPINA4P29622 427 aa7.1□□□□□ -1.27
BRCA1-230ENST00000634433 HOXA9P31269 272 aa7.1□□□□□ -1.27
BRCA1-230ENST00000634433 FMO4P31512 558 aa7.1□□□□□ -1.27
BRCA1-230ENST00000634433 CTNNB1P35222 781 aa7.1□□□□□ -1.27
BRCA1-230ENST00000634433 EPHA5P54756 1037 aa7.1□□□□□ -1.27
BRCA1-230ENST00000634433 PTPN5P54829 565 aa7.1□□□□□ -1.27
BRCA1-230ENST00000634433 SNRPD1P62314 119 aaKnown RBP7.1□□□□□ -1.27
BRCA1-230ENST00000634433 ZXDBP98169 803 aa7.1□□□□□ -1.27
BRCA1-230ENST00000634433 CACNG1Q06432 222 aa7.1□□□□□ -1.27
BRCA1-230ENST00000634433 SULT2A1Q06520 285 aa7.1□□□□□ -1.27
BRCA1-230ENST00000634433 LMAN2Q12907 356 aa7.1□□□□□ -1.27
BRCA1-230ENST00000634433 PTPRCAPQ14761 206 aa7.1□□□□□ -1.27
BRCA1-230ENST00000634433 SLC9B1Q4ZJI4 515 aa7.1□□□□□ -1.27
BRCA1-230ENST00000634433 OXLD1Q5BKU9 147 aa7.1□□□□□ -1.27
BRCA1-230ENST00000634433 ZRANB3Q5FWF4 1079 aa7.1□□□□□ -1.27
BRCA1-230ENST00000634433 ATG14Q6ZNE5 492 aa7.1□□□□□ -1.27
BRCA1-230ENST00000634433 ISCA2Q86U28 154 aa7.1□□□□□ -1.27
BRCA1-230ENST00000634433 LSMEM2Q8N112 164 aa7.1□□□□□ -1.27
BRCA1-230ENST00000634433 CPSF7Q8N684 471 aaKnown RBP7.1□□□□□ -1.27
BRCA1-230ENST00000634433 TTC16Q8NEE8 873 aa7.1□□□□□ -1.27
BRCA1-230ENST00000634433 NSMCE3Q96MG7 304 aa7.1□□□□□ -1.27
BRCA1-230ENST00000634433 TUBGCP5Q96RT8 1024 aa7.1□□□□□ -1.27
BRCA1-230ENST00000634433 MIPEPQ99797 713 aa7.1□□□□□ -1.27
BRCA1-230ENST00000634433 SLC39A3Q9BRY0 314 aa7.1□□□□□ -1.27
BRCA1-230ENST00000634433 SLC46A2Q9BY10 475 aa7.1□□□□□ -1.27
BRCA1-230ENST00000634433 ALG9Q9H6U8 611 aa7.1□□□□□ -1.27
BRCA1-230ENST00000634433 DCLRE1BQ9H816 532 aa7.1□□□□□ -1.27
BRCA1-230ENST00000634433 NOP53Q9NZM5 478 aaKnown RBP7.1□□□□□ -1.27
BRCA1-230ENST00000634433 TBC1D14Q9P2M4 693 aa7.1□□□□□ -1.27
BRCA1-230ENST00000634433 TRMT6Q9UJA5 497 aaKnown RBP7.1□□□□□ -1.27
BRCA1-230ENST00000634433 APPL1Q9UKG1 709 aa7.1□□□□□ -1.27
BRCA1-230ENST00000634433 MKL2Q9ULH7 1088 aa7.1□□□□□ -1.27
BRCA1-230ENST00000634433 ZNF711Q9Y462 761 aa7.1□□□□□ -1.27
BRCA1-230ENST00000634433 PCDHB3Q9Y5E6 796 aa7.1□□□□□ -1.27
BRCA1-230ENST00000634433 PCDHB1Q9Y5F3 818 aa7.1□□□□□ -1.27
BRCA1-230ENST00000634433 GRM6O15303 877 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 GRID2O43424 1007 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 HTRA2O43464 458 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-230ENST00000634433 TM7SF2O76062 418 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 ESR1P03372 595 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 LINC00271P0C7V0 271 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 ZNF37AP17032 561 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-230ENST00000634433 HMGCLP35914 325 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 PGGT1BP53609 377 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 DMC1Q14565 340 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 NAA25Q14CX7 972 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 PTPRNQ16849 979 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 SH2D4BQ5SQS7 431 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 TMEM240Q5SV17 173 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 ATXN7L2Q5T6C5 722 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-230ENST00000634433 VWA5B1Q5TIE3 1220 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 PLPP4Q5VZY2 271 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 TPGS1Q6ZTW0 290 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 FRMD7Q6ZUT3 714 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 TAS2R42Q7RTR8 314 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 SCUBE1Q8IWY4 988 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 CMTM8Q8IZV2 173 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 APCDD1Q8J025 514 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 KDM1BQ8NB78 822 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 RBM15BQ8NDT2 890 aaKnown RBP7.09□□□□□ -1.27
BRCA1-230ENST00000634433 CEP70Q8NHQ1 597 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 SH3RF2Q8TEC5 729 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 AGAP11Q8TF27 550 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 THAP3Q8WTV1 239 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-230ENST00000634433 PIH1D2Q8WWB5 315 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 KIAA1191Q96A73 305 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 CDX2Q99626 313 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-230ENST00000634433 RTKNQ9BST9 563 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 RNPEPL1Q9HAU8 725 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 ITM2CQ9NQX7 267 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 TLR9Q9NR96 1032 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 POLR3BQ9NW08 1133 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-230ENST00000634433 GTSE1Q9NYZ3 720 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 IL17CQ9P0M4 197 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 ZMAT5Q9UDW3 170 aaKnown RBP7.09□□□□□ -1.27
BRCA1-230ENST00000634433 FKBPLQ9UIM3 349 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 SLC25A13Q9UJS0 675 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 PLXNA4Q9HCM2 1894 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 RGSL1A5PLK6 1076 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 A8MUI8 341 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 E9PBE3 544 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 H3BMM5 538 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 ZNF197O14709 1029 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 DCXO43602 365 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 KERAO60938 352 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 MT-CO1P00395 513 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 RB1P06400 928 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms