RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 FBXO48Q5FWF7 155 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 IL23RQ5VWK5 629 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 PPP2R2DQ66LE6 453 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 ZNF783Q6ZMS7 281 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 GALNT13Q8IUC8 556 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 TMEM175Q9BSA9 504 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 ALG9Q9H6U8 611 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 AKTIPQ9H8T0 292 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 VCX3AQ9NNX9 186 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 DUS2Q9NX74 493 aaKnown RBP7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.11□□□□□ -1.272e-7■■■■■ 27.2
CTNNA1-244ENST00000627109 IKZF3Q9UKT9 509 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 PCDHGB4Q9UN71 923 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 NDUFAF1Q9Y375 327 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 RNF11Q9Y3C5 154 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 KCTD3Q9Y597 815 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 PCDHGB5Q9Y5G0 923 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 TCRBV5S2A0A599 114 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 C7orf72A4D263 438 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 ASPDHA6ND91 283 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 GIPC1O14908 333 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 SLC6A4P31645 630 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 ACVRL1P37023 503 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 PBX2P40425 430 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 ALDH3B2P48448 385 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 CDH4P55283 916 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 RALGDSQ12967 914 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 RCAN2Q14206 197 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 MAP7Q14244 749 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 ADRM1Q16186 407 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 NHSL2Q5HYW2 709 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 MRNIPQ6NTE8 343 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 BLOC1S3Q6QNY0 202 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 RSPO2Q6UXX9 243 aaPredicted RBP7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 PRR23BQ6ZRT6 265 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 SPATA19Q7Z5L4 167 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 RBM23Q86U06 439 aaKnown RBP7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 PIM3Q86V86 326 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 TTC9BQ8N6N2 239 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 OR4L1Q8NH43 312 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.11□□□□□ -1.279e-6■■■□□ 15.7
CTNNA1-244ENST00000627109 CDKN2AIPNLQ96HQ2 116 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 SLC45A3Q96JT2 553 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 TBATAQ96M53 351 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 SARS2Q9NP81 518 aaKnown RBP7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 CATSPERZQ9NTU4 200 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 MARCH2Q9P0N8 246 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 DNMT3BQ9UBC3 853 aaKnown RBP7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 V9GYQ6 96 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 CXorf51AA0A1B0GTR3 108 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 NCF1BA6NI72 391 aaPredicted RBP7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 NCF1CA8MVU1 366 aaPredicted RBP7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 FZD6O60353 706 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 SEC24DO94855 1032 aaPredicted RBP7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 NCF1P14598 390 aaPredicted RBP7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 ARSAP15289 507 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 BNIP2Q12982 314 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 TCTN1Q2MV58 587 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 TXNDC11Q6PKC3 985 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 AFTPHQ6ULP2 937 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 ERMP1Q7Z2K6 904 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 SPRED1Q7Z699 444 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 TRIML2Q8N7C3 387 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 TEX19Q8NA77 164 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 OR52K2Q8NGK3 314 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 DGCR14Q96DF8 476 aaKnown RBP7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 DNAJC1Q96KC8 554 aaKnown RBP7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 PRPF18Q99633 342 aaKnown RBP7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 OSBPL11Q9BXB4 747 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 TDRD1Q9BXT4 1180 aaKnown RBP7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 P2RY12Q9H244 342 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 PTTG2Q9NZH5 202 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 ZNF225Q9UK10 706 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 CROTQ9UKG9 612 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 NEUROG3Q9Y4Z2 214 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 INSL6Q9Y581 213 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 AP4S1Q9Y587 144 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 ARL5AQ9Y689 179 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 RFXAPO00287 272 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 AZIN1O14977 448 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 AKAP10O43572 662 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 EEDO75530 441 aaKnown RBP7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 GJB3O75712 270 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 CD160O95971 181 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 ATF6P18850 670 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 HDCP19113 662 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 RFC2P35250 354 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 TUBA4AP68366 448 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 LCP2Q13094 533 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 PDCD4Q53EL6 469 aaKnown RBP7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 RAP1GAP2Q684P5 730 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 CLEC6AQ6EIG7 209 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 RAB44Q7Z6P3 723 aaPredicted RBP7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 TDHQ8IZJ6 230 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 PRR7Q8TB68 274 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 TWIST2Q8WVJ9 160 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 FUBP1Q96AE4 644 aaKnown RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms