RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 CACNA1EQ15878 2313 aa19.62■□□□□ 0.73
PDLIM2-221ENST00000622702 KNL1Q8NG31 2342 aa19.62■□□□□ 0.73
PDLIM2-221ENST00000622702 S1PR4O95977 384 aa19.61■□□□□ 0.73
PDLIM2-221ENST00000622702 LEPRP48357 1165 aaKnown RBP19.61■□□□□ 0.73
PDLIM2-221ENST00000622702 ATXN3P54252 364 aaPredicted RBP19.61■□□□□ 0.73
PDLIM2-221ENST00000622702 NFATC4Q14934 902 aa19.61■□□□□ 0.73
PDLIM2-221ENST00000622702 KLHL38Q2WGJ6 581 aa19.61■□□□□ 0.73
PDLIM2-221ENST00000622702 KHDC1Q4VXA5 237 aaKnown RBP19.61■□□□□ 0.73
PDLIM2-221ENST00000622702 PACS1Q6VY07 963 aa19.61■□□□□ 0.73
PDLIM2-221ENST00000622702 LRRC6Q86X45 466 aa19.61■□□□□ 0.73
PDLIM2-221ENST00000622702 DCP2Q8IU60 420 aaKnown RBP19.61■□□□□ 0.73
PDLIM2-221ENST00000622702 RBFAQ8N0V3 343 aa19.61■□□□□ 0.73
PDLIM2-221ENST00000622702 OR13H1Q8NG92 308 aa19.61■□□□□ 0.73
PDLIM2-221ENST00000622702 UHMK1Q8TAS1 419 aaKnown RBP19.61■□□□□ 0.73
PDLIM2-221ENST00000622702 GDAP1Q8TB36 358 aa19.61■□□□□ 0.73
PDLIM2-221ENST00000622702 VPS18Q9P253 973 aa19.61■□□□□ 0.73
PDLIM2-221ENST00000622702 SLC17A6Q9P2U8 582 aa19.61■□□□□ 0.73
PDLIM2-221ENST00000622702 ANKRD6Q9Y2G4 727 aa19.61■□□□□ 0.73
PDLIM2-221ENST00000622702 OAS3Q9Y6K5 1087 aaKnown RBP19.61■□□□□ 0.73
PDLIM2-221ENST00000622702 VEGFDO43915 354 aa19.6■□□□□ 0.73
PDLIM2-221ENST00000622702 NDUFS3O75489 264 aa19.6■□□□□ 0.73
PDLIM2-221ENST00000622702 PIAS1O75925 651 aa19.6■□□□□ 0.73
PDLIM2-221ENST00000622702 WNT1P04628 370 aa19.6■□□□□ 0.73
PDLIM2-221ENST00000622702 NUDT17P0C025 328 aa19.6■□□□□ 0.73
PDLIM2-221ENST00000622702 KELP23276 732 aa19.6■□□□□ 0.73
PDLIM2-221ENST00000622702 ADARP55265 1226 aaKnown RBP19.6■□□□□ 0.73
PDLIM2-221ENST00000622702 B4GALNT1Q00973 533 aa19.6■□□□□ 0.73
PDLIM2-221ENST00000622702 BNC1Q01954 994 aa19.6■□□□□ 0.73
PDLIM2-221ENST00000622702 TRIM74Q86UV6 250 aa19.6■□□□□ 0.73
PDLIM2-221ENST00000622702 CTAGE3PQ8IX95 158 aa19.6■□□□□ 0.73
PDLIM2-221ENST00000622702 PPM1NQ8N819 430 aa19.6■□□□□ 0.73
PDLIM2-221ENST00000622702 LPGAT1Q92604 370 aa19.6■□□□□ 0.73
PDLIM2-221ENST00000622702 KLHDC7BQ96G42 594 aa19.6■□□□□ 0.73
PDLIM2-221ENST00000622702 ZDHHC5Q9C0B5 715 aa19.6■□□□□ 0.73
PDLIM2-221ENST00000622702 ZCCHC2Q9C0B9 1178 aaKnown RBP19.6■□□□□ 0.73
PDLIM2-221ENST00000622702 ARFGAP3Q9NP61 516 aa19.6■□□□□ 0.73
PDLIM2-221ENST00000622702 TMEM9BQ9NQ34 198 aa19.6■□□□□ 0.73
PDLIM2-221ENST00000622702 FETUBQ9UGM5 382 aa19.6■□□□□ 0.73
PDLIM2-221ENST00000622702 PSAT1Q9Y617 370 aa19.6■□□□□ 0.73
PDLIM2-221ENST00000622702 DNAH14Q0VDD8 3507 aa19.6■□□□□ 0.73
PDLIM2-221ENST00000622702 GPR89AB7ZAQ6 455 aa19.6■□□□□ 0.73
PDLIM2-221ENST00000622702 CFAP99D6REC4 459 aa19.6■□□□□ 0.73
PDLIM2-221ENST00000622702 CDX4O14627 284 aaPredicted RBP19.6■□□□□ 0.73
PDLIM2-221ENST00000622702 VILLO15195 856 aa19.6■□□□□ 0.73
PDLIM2-221ENST00000622702 MAGEC1O60732 1142 aa19.6■□□□□ 0.73
PDLIM2-221ENST00000622702 GPR89BP0CG08 455 aa19.6■□□□□ 0.73
PDLIM2-221ENST00000622702 THEGLP0DJG4 465 aa19.6■□□□□ 0.73
PDLIM2-221ENST00000622702 RALBP11234 206 aa19.6■□□□□ 0.73
PDLIM2-221ENST00000622702 ZNF7P17097 686 aaPredicted RBP19.6■□□□□ 0.73
PDLIM2-221ENST00000622702 HTR1BP28222 390 aa19.6■□□□□ 0.73
PDLIM2-221ENST00000622702 GABRB3P28472 473 aa19.6■□□□□ 0.73
PDLIM2-221ENST00000622702 NSG1P42857 185 aa19.6■□□□□ 0.73
PDLIM2-221ENST00000622702 THOP1P52888 689 aa19.6■□□□□ 0.73
PDLIM2-221ENST00000622702 C21orf59P57076 290 aa19.6■□□□□ 0.73
PDLIM2-221ENST00000622702 MPP1Q00013 466 aa19.6■□□□□ 0.73
PDLIM2-221ENST00000622702 TMEM115Q12893 351 aaPredicted RBP19.6■□□□□ 0.73
PDLIM2-221ENST00000622702 EFTUD2Q15029 972 aaKnown RBP eCLIP19.6■□□□□ 0.736e-8■■■■□ 20.2
PDLIM2-221ENST00000622702 KIF19Q2TAC6 998 aa19.6■□□□□ 0.73
PDLIM2-221ENST00000622702 STPG1Q5TH74 334 aa19.6■□□□□ 0.73
PDLIM2-221ENST00000622702 FBXO38Q6PIJ6 1188 aa19.6■□□□□ 0.73
PDLIM2-221ENST00000622702 ADGRG6Q86SQ4 1221 aa19.6■□□□□ 0.73
PDLIM2-221ENST00000622702 SLC22A18ASQ8N1D0 253 aa19.6■□□□□ 0.73
PDLIM2-221ENST00000622702 OR2I1PQ8NGU4 316 aa19.6■□□□□ 0.73
PDLIM2-221ENST00000622702 NETO1Q8TDF5 533 aa19.6■□□□□ 0.73
PDLIM2-221ENST00000622702 SKA1Q96BD8 255 aa19.6■□□□□ 0.73
PDLIM2-221ENST00000622702 DCUN1D1Q96GG9 259 aa19.6■□□□□ 0.73
PDLIM2-221ENST00000622702 CPNE1Q99829 537 aa19.6■□□□□ 0.73
PDLIM2-221ENST00000622702 MCMBPQ9BTE3 642 aa19.6■□□□□ 0.73
PDLIM2-221ENST00000622702 BOCQ9BWV1 1114 aa19.6■□□□□ 0.73
PDLIM2-221ENST00000622702 FBXO6Q9NRD1 293 aaPredicted RBP19.6■□□□□ 0.73
PDLIM2-221ENST00000622702 SLC17A4Q9Y2C5 497 aa19.6■□□□□ 0.73
PDLIM2-221ENST00000622702 SNX11Q9Y5W9 270 aa19.6■□□□□ 0.73
PDLIM2-221ENST00000622702 TMEM202A6NGA9 273 aa19.59■□□□□ 0.73
PDLIM2-221ENST00000622702 C4orf47A7E2U8 309 aa19.59■□□□□ 0.73
PDLIM2-221ENST00000622702 PRMT5O14744 637 aaPredicted RBP19.59■□□□□ 0.73
PDLIM2-221ENST00000622702 OR1I1O60431 355 aa19.59■□□□□ 0.73
PDLIM2-221ENST00000622702 MTX2O75431 263 aa19.59■□□□□ 0.73
PDLIM2-221ENST00000622702 AHSGP02765 367 aa19.59■□□□□ 0.73
PDLIM2-221ENST00000622702 MSH3P20585 1137 aa19.59■□□□□ 0.73
PDLIM2-221ENST00000622702 RPS3P23396 243 aaKnown RBP eCLIP19.59■□□□□ 0.73
PDLIM2-221ENST00000622702 AKT1P31749 480 aa19.59■□□□□ 0.73
PDLIM2-221ENST00000622702 GP5P40197 560 aa19.59■□□□□ 0.73
PDLIM2-221ENST00000622702 ILF2Q12905 390 aaKnown RBP19.59■□□□□ 0.73
PDLIM2-221ENST00000622702 PDE1CQ14123 709 aaPredicted RBP19.59■□□□□ 0.73
PDLIM2-221ENST00000622702 PTK2BQ14289 1009 aa19.59■□□□□ 0.73
PDLIM2-221ENST00000622702 ZNF789Q5FWF6 425 aa19.59■□□□□ 0.73
PDLIM2-221ENST00000622702 TPRG1LQ5T0D9 272 aa19.59■□□□□ 0.73
PDLIM2-221ENST00000622702 ZNF648Q5T619 568 aaPredicted RBP19.59■□□□□ 0.73
PDLIM2-221ENST00000622702 MACC1Q6ZN28 852 aa19.59■□□□□ 0.73
PDLIM2-221ENST00000622702 STRA8Q7Z7C7 330 aa19.59■□□□□ 0.73
PDLIM2-221ENST00000622702 MINDY1Q8N5J2 469 aa19.59■□□□□ 0.73
PDLIM2-221ENST00000622702 CCDC97Q96F63 343 aaPredicted RBP19.59■□□□□ 0.73
PDLIM2-221ENST00000622702 WDR92Q96MX6 357 aa19.59■□□□□ 0.73
PDLIM2-221ENST00000622702 CCDC77Q9BR77 488 aa19.59■□□□□ 0.73
PDLIM2-221ENST00000622702 ATXN10Q9UBB4 475 aa19.59■□□□□ 0.73
PDLIM2-221ENST00000622702 TP53BP1Q12888 1972 aaPredicted RBP19.58■□□□□ 0.73
PDLIM2-221ENST00000622702 CEP250Q9BV73 2442 aa19.58■□□□□ 0.72
PDLIM2-221ENST00000622702 SPTY2D1-AS1A0A0U1RR47 76 aa19.58■□□□□ 0.72
PDLIM2-221ENST00000622702 EXOC1LA0A1B0GW35 172 aa19.58■□□□□ 0.72
PDLIM2-221ENST00000622702 TLR4O00206 839 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms