RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 UROSP10746 265 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 C15orf39Q6ZRI6 1047 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 OFCC1Q8IZS5 231 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 OR10G6Q8NH81 332 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 CENPNQ96H22 339 aaPredicted RBP8.29□□□□□ -1.08
ALMS1-208ENST00000620466 HAPLN2Q9GZV7 340 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 CYTH4Q9UIA0 394 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 FGF3P11487 239 aaPredicted RBP8.29□□□□□ -1.08
ALMS1-208ENST00000620466 PKMP14618 531 aaKnown RBP8.29□□□□□ -1.08
ALMS1-208ENST00000620466 CES1P23141 567 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 NDST2P52849 883 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 TRAP1Q12931 704 aaKnown RBP8.29□□□□□ -1.08
ALMS1-208ENST00000620466 LCP2Q13094 533 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 ITGA7Q13683 1181 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 CPSF6Q16630 551 aaKnown RBP eCLIP8.29□□□□□ -1.08
ALMS1-208ENST00000620466 PLPP4Q5VZY2 271 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 KIAA0408Q6ZU52 694 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 OR52L1Q8NGH7 329 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 PSMA8Q8TAA3 256 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 S100ZQ8WXG8 99 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 MYDGFQ969H8 173 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 SLC9A7Q96T83 725 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 ACBD6Q9BR61 282 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 KIFC1Q9BW19 673 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 EPB41L4BQ9H329 900 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 ATP13A3Q9H7F0 1226 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 VPS4AQ9UN37 437 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 ARL5AQ9Y689 179 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 U3KQV3 271 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 RFXANKO14593 260 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 AP3D1O14617 1153 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 IDH2P48735 452 aaKnown RBP8.28□□□□□ -1.08
ALMS1-208ENST00000620466 XKR6Q5GH73 641 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 RASAL3Q86YV0 1011 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 ZDHHC14Q8IZN3 488 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 MYO19Q96H55 970 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 SYT11Q9BT88 431 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 TDRD1Q9BXT4 1180 aaKnown RBP8.28□□□□□ -1.08
ALMS1-208ENST00000620466 ZNF232Q9UNY5 417 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 DGKBQ9Y6T7 804 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 SIPA1L3O60292 1781 aaPredicted RBP8.28□□□□□ -1.08
ALMS1-208ENST00000620466 FADS2O95864 444 aaKnown RBP8.28□□□□□ -1.08
ALMS1-208ENST00000620466 FTH1P02794 183 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 SCNN1AP37088 669 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 ARHGAP1Q07960 439 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 DLG1Q12959 904 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 AP5B1Q2VPB7 878 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 KIAA0930Q6ICG6 404 aaPredicted RBP8.28□□□□□ -1.08
ALMS1-208ENST00000620466 OR4A15Q8NGL6 344 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 DENND1AQ8TEH3 1009 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 NTAN1Q96AB6 310 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 SIGLEC10Q96LC7 697 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 ABCB10Q9NRK6 738 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 NUDT4Q9NZJ9 180 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 SPATA2Q9UM82 520 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 SAMHD1Q9Y3Z3 626 aaKnown RBP8.28□□□□□ -1.08
ALMS1-208ENST00000620466 BTBD19C9JJ37 291 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 HLA-DQB2P05538 268 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 GNAZP19086 355 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 TACR2P21452 398 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 RPL26P61254 145 aaKnown RBP8.28□□□□□ -1.08
ALMS1-208ENST00000620466 CYP4F2P78329 520 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 CYP4F3Q08477 520 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 TAF10Q12962 218 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 SPANXN2Q5MJ10 180 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 HFE2Q6ZVN8 426 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 GET4Q7L5D6 327 aaPredicted RBP8.28□□□□□ -1.08
ALMS1-208ENST00000620466 THAP5Q7Z6K1 395 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 SLCO6A1Q86UG4 719 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 GPR180Q86V85 440 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 TREML1Q86YW5 311 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 RBFAQ8N0V3 343 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 DCBLD1Q8N8Z6 715 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 PSMG2Q969U7 264 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 PANX1Q96RD7 426 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 FCRL5Q96RD9 977 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 PCYT2Q99447 389 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 C2orf49Q9BVC5 232 aaPredicted RBP8.28□□□□□ -1.08
ALMS1-208ENST00000620466 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.28□□□□□ -1.08
ALMS1-208ENST00000620466 EHD3Q9NZN3 535 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 MRPS23Q9Y3D9 190 aaKnown RBP8.28□□□□□ -1.08
ALMS1-208ENST00000620466 NEMP2A6NFY4 417 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 GMFGO60234 142 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 CBFA2T3O75081 653 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 UGT2B11O75310 529 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 GPIP06744 558 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 THRBP10828 461 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 DBTP11182 482 aaKnown RBP8.28□□□□□ -1.08
ALMS1-208ENST00000620466 CCNFP41002 786 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 CDC42P60953 191 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 SPIBQ01892 262 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 GTF2H2Q13888 395 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 SNAP47Q5SQN1 464 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 GTF2H2CQ6P1K8 395 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 KCTD8Q6ZWB6 473 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 ASRGL1Q7L266 308 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 KBTBD2Q8IY47 623 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 OR6K2Q8NGY2 324 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 ASB9Q96DX5 294 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 PRR11Q96HE9 360 aaPredicted RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms