RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, human

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD3-215	ENST00000619322	C11orf63	Q6NUN7	778 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	SULF2	Q8IWU5	870 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	GPALPP1	Q8IXQ4	340 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	CHPF	Q8IZ52	775 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	ESX1	Q8N693	406 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	IFI44	Q8TCB0	444 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	FBLIM1	Q8WUP2	373 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	RSC1A1	Q92681	617 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	TP53INP1	Q96A56	240 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	ARL8A	Q96BM9	186 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	ACOX2	Q99424	681 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	SH3GL3	Q99963	347 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	CRACR2A	Q9BSW2	395 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	ASPSCR1	Q9BZE9	553 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	FAM129A	Q9BZQ8	928 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	AKTIP	Q9H8T0	292 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	SLC40A1	Q9NP59	571 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	UVRAG	Q9P2Y5	699 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	COPG2	Q9UBF2	871 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	CLEC4E	Q9ULY5	219 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	UBA6	A0AVT1	1052 aa	Predicted RBP	5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	TMEM191C	A6NGB0	347 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	SIGLEC6	O43699	453 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	KIAA0754	O94854	1291 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	ZFX	P17010	805 aa	Predicted RBP	5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	NAT1	P18440	290 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	CALR	P27797	417 aa	Known RBP	5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	CYP2J2	P51589	502 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	KLHL30	Q0D2K2	578 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	ZKSCAN8	Q15776	578 aa	Predicted RBP	5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	BOLA3	Q53S33	107 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	TRNP1	Q6NT89	227 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	NIPAL1	Q6NVV3	410 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	NEK10	Q6ZWH5	1172 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	TMCO5A	Q8N6Q1	288 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	DDHD1	Q8NEL9	900 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	ROBO4	Q8WZ75	1007 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	RNF34	Q969K3	372 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	C14orf79	Q96F83	325 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	SCRN2	Q96FV2	425 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	PBK	Q96KB5	322 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	CCM2	Q9BSQ5	444 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	TRIM4	Q9C037	500 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	CLPB	Q9H078	707 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	KIR3DX1	Q9H7L2	352 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	NLRC4	Q9NPP4	1024 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	VTI1B	Q9UEU0	232 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	PPIE	Q9UNP9	301 aa	Known RBP	5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	HEBP2	Q9Y5Z4	205 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	AK5	Q9Y6K8	562 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	SLC9B1P1	A6NJY1	282 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322		I6L893	689 aa	Predicted RBP	5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	GIPC1	O14908	333 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	DIAPH2	O60879	1101 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	KRT14	P02533	472 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	EPHX1	P07099	455 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	DES	P17661	470 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	MAGEA6	P43360	314 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	GABRA4	P48169	554 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	HK3	P52790	923 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	RIPPLY3	P57055	190 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	RNASE9	P60153	205 aa	Known RBP	5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	MEF2A	Q02078	507 aa	Predicted RBP	5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	RAD51	Q06609	339 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	SLC5A12	Q1EHB4	618 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	ZNF324B	Q6AW86	544 aa	Predicted RBP	5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	CAPRIN2	Q6IMN6	1127 aa	Known RBP	5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	GJB7	Q6PEY0	223 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	CEACAM20	Q6UY09	585 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	TMC3	Q7Z5M5	1100 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	SFRP1	Q8N474	314 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	PPHLN1	Q8NEY8	458 aa	Known RBP	5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	MS4A14	Q96JA4	679 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	CCNL2	Q96S94	520 aa	Predicted RBP	5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	CPXM1	Q96SM3	734 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	PAIP2	Q9BPZ3	127 aa	Known RBP	5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	APOO	Q9BUR5	198 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	NUP85	Q9BW27	656 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	ACBD3	Q9H3P7	528 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	MRGBP	Q9NV56	204 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	ZNF451	Q9Y4E5	1061 aa		5.36	□□□□□ -1.55
CBWD3-215	ENST00000619322	ATXN2	Q99700	1313 aa	Known RBP	5.35	□□□□□ -1.55
CBWD3-215	ENST00000619322		M0QYV0	167 aa		5.35	□□□□□ -1.55
CBWD3-215	ENST00000619322	HCRT	O43612	131 aa		5.35	□□□□□ -1.55
CBWD3-215	ENST00000619322	BUB1B	O60566	1050 aa	Predicted RBP	5.35	□□□□□ -1.55
CBWD3-215	ENST00000619322	SMIM24	O75264	130 aa		5.35	□□□□□ -1.55
CBWD3-215	ENST00000619322	RHOC	P08134	193 aa		5.35	□□□□□ -1.55
CBWD3-215	ENST00000619322	ETS2	P15036	469 aa		5.35	□□□□□ -1.55
CBWD3-215	ENST00000619322	GPD1	P21695	349 aa		5.35	□□□□□ -1.55
CBWD3-215	ENST00000619322	SLC1A1	P43005	524 aa		5.35	□□□□□ -1.55
CBWD3-215	ENST00000619322	CDR1	P51861	262 aa		5.35	□□□□□ -1.55
CBWD3-215	ENST00000619322	HDAC4	P56524	1084 aa		5.35	□□□□□ -1.55
CBWD3-215	ENST00000619322	IRX1	P78414	480 aa	Predicted RBP	5.35	□□□□□ -1.55
CBWD3-215	ENST00000619322	PDE1B	Q01064	536 aa		5.35	□□□□□ -1.55
CBWD3-215	ENST00000619322	OCRL	Q01968	901 aa		5.35	□□□□□ -1.55
CBWD3-215	ENST00000619322	PRKD1	Q15139	912 aa	Predicted RBP	5.35	□□□□□ -1.55
CBWD3-215	ENST00000619322	TTMP	Q5BVD1	217 aa		5.35	□□□□□ -1.55
CBWD3-215	ENST00000619322	ALS2CL	Q60I27	953 aa		5.35	□□□□□ -1.55
CBWD3-215	ENST00000619322	PNCK	Q6P2M8	343 aa		5.35	□□□□□ -1.55
CBWD3-215	ENST00000619322	CCDC13	Q8IYE1	715 aa		5.35	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms