RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 CADM2Q8N3J6 435 aa12.98□□□□□ -0.33
USP6NL-205ENST00000609104 APOLD1Q96LR9 279 aa12.98□□□□□ -0.33
USP6NL-205ENST00000609104 WDR18Q9BV38 432 aa12.98□□□□□ -0.33
USP6NL-205ENST00000609104 TMEM27Q9HBJ8 222 aa12.98□□□□□ -0.33
USP6NL-205ENST00000609104 PPRC1Q5VV67 1664 aaKnown RBP12.98□□□□□ -0.33
USP6NL-205ENST00000609104 SH3D21A4FU49 640 aa12.98□□□□□ -0.33
USP6NL-205ENST00000609104 LRRC10BA6NIK2 292 aa12.98□□□□□ -0.33
USP6NL-205ENST00000609104 C9JVG2 144 aa12.98□□□□□ -0.33
USP6NL-205ENST00000609104 CLDN9O95484 217 aa12.98□□□□□ -0.33
USP6NL-205ENST00000609104 SPATA31D3P0C874 917 aa12.98□□□□□ -0.33
USP6NL-205ENST00000609104 AZGP1P25311 298 aaKnown RBP12.98□□□□□ -0.33
USP6NL-205ENST00000609104 CXCL9Q07325 125 aa12.98□□□□□ -0.33
USP6NL-205ENST00000609104 FASTKD3Q14CZ7 662 aaKnown RBP12.98□□□□□ -0.33
USP6NL-205ENST00000609104 CRY2Q49AN0 593 aa12.98□□□□□ -0.33
USP6NL-205ENST00000609104 SPATA31D4Q6ZUB0 917 aa12.98□□□□□ -0.33
USP6NL-205ENST00000609104 TBC1D17Q9HA65 648 aa12.98□□□□□ -0.33
USP6NL-205ENST00000609104 TRAFD1O14545 582 aaPredicted RBP12.98□□□□□ -0.33
USP6NL-205ENST00000609104 PSMD10O75832 226 aa12.98□□□□□ -0.33
USP6NL-205ENST00000609104 FAM13CQ8NE31 585 aa12.98□□□□□ -0.33
USP6NL-205ENST00000609104 KIAA1210Q9ULL0 1709 aa12.98□□□□□ -0.33
USP6NL-205ENST00000609104 A0A1W2PQH9 124 aa12.98□□□□□ -0.33
USP6NL-205ENST00000609104 TXNL4AP83876 142 aaKnown RBP12.98□□□□□ -0.33
USP6NL-205ENST00000609104 CCDC54Q8NEL0 328 aa12.98□□□□□ -0.33
USP6NL-205ENST00000609104 GAL3ST1Q99999 423 aa12.98□□□□□ -0.33
USP6NL-205ENST00000609104 DEPDC5O75140 1603 aa12.98□□□□□ -0.33
USP6NL-205ENST00000609104 RPP40O75818 363 aaKnown RBP12.98□□□□□ -0.33
USP6NL-205ENST00000609104 DNASE1L1P49184 302 aa12.98□□□□□ -0.33
USP6NL-205ENST00000609104 DCBLD1Q8N8Z6 715 aa12.98□□□□□ -0.33
USP6NL-205ENST00000609104 DNAJC28Q9NX36 388 aa12.98□□□□□ -0.33
USP6NL-205ENST00000609104 SMPD3Q9NY59 655 aaPredicted RBP12.98□□□□□ -0.33
USP6NL-205ENST00000609104 CACNB4O00305 520 aaPredicted RBP12.98□□□□□ -0.33
USP6NL-205ENST00000609104 PSKH1P11801 424 aa12.98□□□□□ -0.33
USP6NL-205ENST00000609104 CA9Q16790 459 aa12.98□□□□□ -0.33
USP6NL-205ENST00000609104 FAM129CQ86XR2 697 aa12.98□□□□□ -0.33
USP6NL-205ENST00000609104 TOP1MTQ969P6 601 aa12.98□□□□□ -0.33
USP6NL-205ENST00000609104 CDT1Q9H211 546 aa12.98□□□□□ -0.33
USP6NL-205ENST00000609104 C12orf65Q9H3J6 166 aaKnown RBP12.98□□□□□ -0.33
USP6NL-205ENST00000609104 PCDH18Q9HCL0 1135 aa12.98□□□□□ -0.33
USP6NL-205ENST00000609104 CHMP1AQ9HD42 196 aaPredicted RBP12.98□□□□□ -0.33
USP6NL-205ENST00000609104 KLF15Q9UIH9 416 aa12.98□□□□□ -0.33
USP6NL-205ENST00000609104 FAM149AA5PLN7 773 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 AIREO43918 545 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 OR7A10O76100 309 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 CTNNB1P35222 781 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 CAPN13Q6MZZ7 669 aaPredicted RBP12.97□□□□□ -0.33
USP6NL-205ENST00000609104 MSANTD1Q6ZTZ1 278 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 CRYBG2Q8N1P7 616 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 EXOSC8Q96B26 276 aaKnown RBP12.97□□□□□ -0.33
USP6NL-205ENST00000609104 NODALQ96S42 347 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 PNPLA8Q9NP80 782 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 NOBOXO60393 691 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 COL6A1P12109 1028 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 SCN1BQ07699 218 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 PLEKHG4Q58EX7 1191 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 IL23RQ5VWK5 629 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 SLC43A3Q8NBI5 491 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 MYO19Q96H55 970 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 C5orf34Q96MH7 638 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 EIF3KQ9UBQ5 218 aaKnown RBP12.97□□□□□ -0.33
USP6NL-205ENST00000609104 PRDM4Q9UKN5 801 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 PCDHGB3Q9Y5G1 929 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 TOR1BO14657 336 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 SMARCB1Q12824 385 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 SMARCD3Q6STE5 483 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 ZYG11AQ6WRX3 759 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 SUN5Q8TC36 379 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 STYXQ8WUJ0 223 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 RPL26L1Q9UNX3 145 aaKnown RBP12.97□□□□□ -0.33
USP6NL-205ENST00000609104 MANSC4A6NHS7 340 aaPredicted RBP12.97□□□□□ -0.33
USP6NL-205ENST00000609104 hCG_2039718K7EN88 272 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 HSPA7P48741 367 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 BTN3A2P78410 334 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 FAM46CQ5VWP2 391 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 PGAM4Q8N0Y7 254 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 C12orf50Q8NA57 414 aaPredicted RBP12.97□□□□□ -0.33
USP6NL-205ENST00000609104 DNAJC19Q96DA6 116 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 TBC1D3DA0A087WVF3 549 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 TBC1D3IA0A087WXS9 549 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 TBC1D3EA0A087X179 549 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 TBC1D3KA0A087X1G2 549 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 TBC1D3FA6NER0 549 aaPredicted RBP12.97□□□□□ -0.33
USP6NL-205ENST00000609104 RIIAD1A6NNX1 92 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 TBC1D3LB9A6J9 549 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 TBC1D3HP0C7X1 549 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 MPP1Q00013 466 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 TBC1D3GQ6DHY5 549 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 TBC1D3CQ6IPX1 549 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 TBC1D3Q8IZP1 549 aaPredicted RBP12.97□□□□□ -0.33
USP6NL-205ENST00000609104 TTYH1Q9H313 450 aaPredicted RBP12.97□□□□□ -0.33
USP6NL-205ENST00000609104 UCKL1Q9NWZ5 548 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 MMP14P50281 582 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 GTF2H2Q13888 395 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 GTF2H2CQ6P1K8 395 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 JOSD2Q8TAC2 188 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 KCTD5Q9NXV2 234 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 KIAA1522Q9P206 1035 aaPredicted RBP12.97□□□□□ -0.33
USP6NL-205ENST00000609104 IQGAP1P46940 1657 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 LAMP2P13473 410 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 ASMTP46597 345 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 ATXN1P54253 815 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms