RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 GABARAPL2P60520 117 aa12.47□□□□□ -0.41
CTCFL-218ENST00000608440 DAG1Q14118 895 aa12.47□□□□□ -0.41
CTCFL-218ENST00000608440 ARMC4Q5T2S8 1044 aa12.47□□□□□ -0.41
CTCFL-218ENST00000608440 PRSS42Q7Z5A4 293 aa12.47□□□□□ -0.41
CTCFL-218ENST00000608440 PLD5Q8N7P1 536 aa12.47□□□□□ -0.41
CTCFL-218ENST00000608440 ZNF555Q8NEP9 628 aa12.47□□□□□ -0.41
CTCFL-218ENST00000608440 SLC2A14Q8TDB8 520 aa12.47□□□□□ -0.41
CTCFL-218ENST00000608440 TRNT1Q96Q11 434 aaKnown RBP12.47□□□□□ -0.41
CTCFL-218ENST00000608440 SLC25A23Q9BV35 468 aa12.47□□□□□ -0.41
CTCFL-218ENST00000608440 KIFC3Q9BVG8 833 aa12.47□□□□□ -0.41
CTCFL-218ENST00000608440 FTHL17Q9BXU8 183 aa12.47□□□□□ -0.41
CTCFL-218ENST00000608440 KAT8Q9H7Z6 458 aaKnown RBP12.47□□□□□ -0.41
CTCFL-218ENST00000608440 ASNSD1Q9NWL6 643 aa12.47□□□□□ -0.41
CTCFL-218ENST00000608440 EVLQ9UI08 416 aaPredicted RBP12.47□□□□□ -0.41
CTCFL-218ENST00000608440 GRIP1Q9Y3R0 1128 aa12.47□□□□□ -0.41
CTCFL-218ENST00000608440 TTC24A2A3L6 582 aaPredicted RBP12.46□□□□□ -0.41
CTCFL-218ENST00000608440 LOC110117498-PIK3R3F6TDL0 507 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 BTN3A3O00478 584 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 NR5A2O00482 541 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 TBX3O15119 743 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 PMM2O15305 246 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 DNAJB5O75953 348 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 ALPLP05186 524 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 ADORA3P0DMS8 318 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 SNHG28P0DPA3 235 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 ITGA2P17301 1181 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 FMO3P31513 532 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 TAB1Q15750 504 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 QRICH1Q2TAL8 776 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 PTCHD3Q3KNS1 767 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 LIPMQ5VYY2 423 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 FAM45BPQ6NSW5 357 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 BRAT1Q6PJG6 821 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 LIPIQ6XZB0 460 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 BEND5Q7L4P6 421 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 SIAH1Q8IUQ4 282 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 ACVR1CQ8NER5 493 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 OR8K3Q8NH51 312 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 FAM45AQ8TCE6 357 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 TMBIM1Q969X1 311 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 NXPE3Q969Y0 559 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 MARVELD3Q96A59 401 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 CEP19Q96LK0 163 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 OMDQ99983 421 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 KATNAL1Q9BW62 490 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 AMBRA1Q9C0C7 1298 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 SAV1Q9H4B6 383 aaPredicted RBP12.46□□□□□ -0.41
CTCFL-218ENST00000608440 RNF167Q9H6Y7 350 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 B3GNT2Q9NY97 397 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 TJP2Q9UDY2 1190 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 ZNF98A6NK75 572 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 OR5F1O95221 314 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 PROS1P07225 676 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 CDH6P55285 790 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 PCBP1Q15365 356 aaKnown RBP eCLIP12.46□□□□□ -0.41
CTCFL-218ENST00000608440 FUT11Q495W5 492 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 TRIM60Q495X7 471 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 VPS26BQ4G0F5 336 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 FAM209BQ5JX69 171 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 SPANXN2Q5MJ10 180 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 FKBP1CQ5VVH2 108 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 TYW3Q6IPR3 259 aaKnown RBP12.46□□□□□ -0.41
CTCFL-218ENST00000608440 LCN8Q6JVE9 175 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 TMEM81Q6P7N7 255 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 PADI6Q6TGC4 694 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 NLRP8Q86W28 1048 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 PELI3Q8N2H9 469 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 UBE2J2Q8N2K1 259 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 KDM1BQ8NB78 822 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 ZMIZ2Q8NF64 920 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 DNERQ8NFT8 737 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 SPPL2BQ8TCT7 592 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 ZNF606Q8WXB4 792 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 TWNKQ96RR1 684 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 BCL7BQ9BQE9 202 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 FBRSL1Q9HCM7 1045 aaKnown RBP12.46□□□□□ -0.41
CTCFL-218ENST00000608440 CMTM6Q9NX76 183 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 CCDC59Q9P031 241 aaKnown RBP12.46□□□□□ -0.41
CTCFL-218ENST00000608440 REV1Q9UBZ9 1251 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 SEPT9Q9UHD8 586 aaPredicted RBP12.46□□□□□ -0.41
CTCFL-218ENST00000608440 USP22Q9UPT9 525 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 INVSQ9Y283 1065 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 ZNF175Q9Y473 711 aa12.46□□□□□ -0.41
CTCFL-218ENST00000608440 MTF2Q9Y483 593 aaPredicted RBP12.46□□□□□ -0.41
CTCFL-218ENST00000608440 SLCO1B7G3V0H7 640 aa12.46□□□□□ -0.42
CTCFL-218ENST00000608440 DDX39AO00148 427 aaKnown RBP12.46□□□□□ -0.42
CTCFL-218ENST00000608440 GPIP06744 558 aa12.46□□□□□ -0.42
CTCFL-218ENST00000608440 HOXD4P09016 255 aaPredicted RBP12.46□□□□□ -0.42
CTCFL-218ENST00000608440 MGAT1P26572 445 aa12.46□□□□□ -0.42
CTCFL-218ENST00000608440 YWHAQP27348 245 aa12.46□□□□□ -0.42
CTCFL-218ENST00000608440 CD6P30203 668 aa12.46□□□□□ -0.42
CTCFL-218ENST00000608440 CSTF2P33240 577 aaKnown RBP eCLIP12.46□□□□□ -0.42
CTCFL-218ENST00000608440 RFX2P48378 723 aa12.46□□□□□ -0.42
CTCFL-218ENST00000608440 MASP1P48740 699 aa12.46□□□□□ -0.42
CTCFL-218ENST00000608440 IL5RAQ01344 420 aa12.46□□□□□ -0.42
CTCFL-218ENST00000608440 ENPEPQ07075 957 aa12.46□□□□□ -0.42
CTCFL-218ENST00000608440 COX10Q12887 443 aa12.46□□□□□ -0.42
CTCFL-218ENST00000608440 SQLEQ14534 574 aa12.46□□□□□ -0.42
CTCFL-218ENST00000608440 SOWAHCQ53LP3 525 aaPredicted RBP12.46□□□□□ -0.42
CTCFL-218ENST00000608440 CCNJQ5T5M9 372 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms