RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 GOLGA6L19H0YKK7 550 aa17.55■□□□□ 0.4
SHKBP1-227ENST00000602011 KCNK1O00180 336 aa17.55■□□□□ 0.4
SHKBP1-227ENST00000602011 CDK14O94921 469 aa17.55■□□□□ 0.4
SHKBP1-227ENST00000602011 CCNYL3P0C7X3 344 aa17.55■□□□□ 0.4
SHKBP1-227ENST00000602011 GJC1P36383 396 aa17.55■□□□□ 0.4
SHKBP1-227ENST00000602011 SLC19A1P41440 591 aa17.55■□□□□ 0.4
SHKBP1-227ENST00000602011 INSCQ1MX18 579 aa17.55■□□□□ 0.4
SHKBP1-227ENST00000602011 LRRC38Q5VT99 294 aa17.55■□□□□ 0.4
SHKBP1-227ENST00000602011 SLC9A4Q6AI14 798 aa17.55■□□□□ 0.4
SHKBP1-227ENST00000602011 CAVIN1Q6NZI2 390 aaKnown RBP17.55■□□□□ 0.4
SHKBP1-227ENST00000602011 KLHL35Q6PF15 583 aa17.55■□□□□ 0.4
SHKBP1-227ENST00000602011 ADGRG6Q86SQ4 1221 aa17.55■□□□□ 0.4
SHKBP1-227ENST00000602011 ULBP3Q9BZM4 244 aa17.55■□□□□ 0.4
SHKBP1-227ENST00000602011 OSGEPL1Q9H4B0 414 aa17.55■□□□□ 0.4
SHKBP1-227ENST00000602011 CBX8Q9HC52 389 aa17.55■□□□□ 0.4
SHKBP1-227ENST00000602011 ZNF71Q9NQZ8 489 aaPredicted RBP17.55■□□□□ 0.4
SHKBP1-227ENST00000602011 KLHL3Q9UH77 587 aa17.55■□□□□ 0.4
SHKBP1-227ENST00000602011 NENFQ9UMX5 172 aa17.55■□□□□ 0.4
SHKBP1-227ENST00000602011 GOLGA6L3A6NEY3 463 aa17.54■□□□□ 0.4
SHKBP1-227ENST00000602011 APOL1O14791 398 aa17.54■□□□□ 0.4
SHKBP1-227ENST00000602011 EPOP01588 193 aa17.54■□□□□ 0.4
SHKBP1-227ENST00000602011 NR2C2P49116 596 aa17.54■□□□□ 0.4
SHKBP1-227ENST00000602011 TAS2R40P59535 323 aa17.54■□□□□ 0.4
SHKBP1-227ENST00000602011 FOXM1Q08050 763 aa17.54■□□□□ 0.4
SHKBP1-227ENST00000602011 AP1B1Q10567 949 aa17.54■□□□□ 0.4
SHKBP1-227ENST00000602011 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.54■□□□□ 0.4
SHKBP1-227ENST00000602011 ODF2Q5BJF6 829 aa17.54■□□□□ 0.4
SHKBP1-227ENST00000602011 PRSS42Q7Z5A4 293 aa17.54■□□□□ 0.4
SHKBP1-227ENST00000602011 GPR26Q8NDV2 337 aa17.54■□□□□ 0.4
SHKBP1-227ENST00000602011 RAPGEF5Q92565 580 aa17.54■□□□□ 0.4
SHKBP1-227ENST00000602011 TADA1Q96BN2 335 aa17.54■□□□□ 0.4
SHKBP1-227ENST00000602011 EID2BQ96D98 161 aa17.54■□□□□ 0.4
SHKBP1-227ENST00000602011 RNF31Q96EP0 1072 aa17.54■□□□□ 0.4
SHKBP1-227ENST00000602011 APMAPQ9HDC9 416 aa17.54■□□□□ 0.4
SHKBP1-227ENST00000602011 SLC40A1Q9NP59 571 aa17.54■□□□□ 0.4
SHKBP1-227ENST00000602011 HEY1Q9Y5J3 304 aa17.54■□□□□ 0.4
SHKBP1-227ENST00000602011 DNMT3AQ9Y6K1 912 aaPredicted RBP17.54■□□□□ 0.4
SHKBP1-227ENST00000602011 SSU72P8A0A1W2PR75 194 aa17.53■□□□□ 0.4
SHKBP1-227ENST00000602011 PRR19A6NJB7 356 aa17.53■□□□□ 0.4
SHKBP1-227ENST00000602011 PDZK1P1A8MUH7 402 aa17.53■□□□□ 0.4
SHKBP1-227ENST00000602011 MKRN2OSH3BPM6 223 aa17.53■□□□□ 0.4
SHKBP1-227ENST00000602011 NDST3O95803 873 aa17.53■□□□□ 0.4
SHKBP1-227ENST00000602011 TMEM253P0C7T8 217 aa17.53■□□□□ 0.4
SHKBP1-227ENST00000602011 PRKAR1AP10644 381 aa17.53■□□□□ 0.4
SHKBP1-227ENST00000602011 FGF5P12034 268 aa17.53■□□□□ 0.4
SHKBP1-227ENST00000602011 HMGCLP35914 325 aa17.53■□□□□ 0.4
SHKBP1-227ENST00000602011 HALP42357 657 aa17.53■□□□□ 0.4
SHKBP1-227ENST00000602011 TNNT3P45378 269 aaPredicted RBP17.53■□□□□ 0.4
SHKBP1-227ENST00000602011 FOXK1P85037 733 aa17.53■□□□□ 0.4
SHKBP1-227ENST00000602011 KLRB1Q12918 225 aa17.53■□□□□ 0.4
SHKBP1-227ENST00000602011 GTF2H3Q13889 308 aa17.53■□□□□ 0.4
SHKBP1-227ENST00000602011 UBAP2LQ14157 1087 aaKnown RBP17.53■□□□□ 0.4
SHKBP1-227ENST00000602011 DEFB109BQ30KR1 87 aa17.53■□□□□ 0.4
SHKBP1-227ENST00000602011 LACTB2Q53H82 288 aaPredicted RBP17.53■□□□□ 0.4
SHKBP1-227ENST00000602011 TEX44Q53QW1 395 aa17.53■□□□□ 0.4
SHKBP1-227ENST00000602011 UNC5BQ8IZJ1 945 aa17.53■□□□□ 0.4
SHKBP1-227ENST00000602011 PLD5Q8N7P1 536 aa17.53■□□□□ 0.4
SHKBP1-227ENST00000602011 KLHL6Q8WZ60 621 aa17.53■□□□□ 0.4
SHKBP1-227ENST00000602011 CXorf40BQ96DE9 158 aa17.53■□□□□ 0.4
SHKBP1-227ENST00000602011 ABHD17AQ96GS6 310 aa17.53■□□□□ 0.4
SHKBP1-227ENST00000602011 TTC25Q96NG3 672 aa17.53■□□□□ 0.4
SHKBP1-227ENST00000602011 ZCCHC2Q9C0B9 1178 aaKnown RBP17.53■□□□□ 0.4
SHKBP1-227ENST00000602011 ZNHIT6Q9NWK9 470 aaKnown RBP17.53■□□□□ 0.4
SHKBP1-227ENST00000602011 ZNF624Q9P2J8 865 aaPredicted RBP17.53■□□□□ 0.4
SHKBP1-227ENST00000602011 PADI1Q9ULC6 663 aa17.53■□□□□ 0.4
SHKBP1-227ENST00000602011 SHOC2Q9UQ13 582 aa17.53■□□□□ 0.4
SHKBP1-227ENST00000602011 ZNF711Q9Y462 761 aa17.53■□□□□ 0.4
SHKBP1-227ENST00000602011 PCDHGA6Q9Y5G7 932 aa17.53■□□□□ 0.4
SHKBP1-227ENST00000602011 LRRD1A4D1F6 860 aa17.52■□□□□ 0.4
SHKBP1-227ENST00000602011 KLHL33A6NCF5 533 aa17.52■□□□□ 0.4
SHKBP1-227ENST00000602011 MTSS1O43312 755 aa17.52■□□□□ 0.4
SHKBP1-227ENST00000602011 NTRK1P04629 796 aa17.52■□□□□ 0.4
SHKBP1-227ENST00000602011 GYPCP04921 128 aa17.52■□□□□ 0.4
SHKBP1-227ENST00000602011 OAS2P29728 719 aaKnown RBP17.52■□□□□ 0.4
SHKBP1-227ENST00000602011 DLSTP36957 453 aa17.52■□□□□ 0.4
SHKBP1-227ENST00000602011 SLC1A1P43005 524 aa17.52■□□□□ 0.4
SHKBP1-227ENST00000602011 CAPZBP47756 277 aa17.52■□□□□ 0.4
SHKBP1-227ENST00000602011 TMEM115Q12893 351 aaPredicted RBP17.52■□□□□ 0.4
SHKBP1-227ENST00000602011 ZBTB17Q13105 803 aa17.52■□□□□ 0.4
SHKBP1-227ENST00000602011 GALNT3Q14435 633 aa17.52■□□□□ 0.4
SHKBP1-227ENST00000602011 TCTN3Q6NUS6 607 aa17.52■□□□□ 0.4
SHKBP1-227ENST00000602011 PPP1R3BQ86XI6 285 aa17.52■□□□□ 0.4
SHKBP1-227ENST00000602011 RASGRP3Q8IV61 690 aa17.52■□□□□ 0.4
SHKBP1-227ENST00000602011 RHOT2Q8IXI1 618 aa17.52■□□□□ 0.4
SHKBP1-227ENST00000602011 OR8K1Q8NGG5 319 aa17.52■□□□□ 0.4
SHKBP1-227ENST00000602011 UBXN4Q92575 508 aa17.52■□□□□ 0.4
SHKBP1-227ENST00000602011 STAMBPL1Q96FJ0 436 aa17.52■□□□□ 0.4
SHKBP1-227ENST00000602011 AGAP3Q96P47 875 aa17.52■□□□□ 0.4
SHKBP1-227ENST00000602011 OLFM3Q96PB7 478 aa17.52■□□□□ 0.4
SHKBP1-227ENST00000602011 TGM7Q96PF1 710 aa17.52■□□□□ 0.4
SHKBP1-227ENST00000602011 OR6C1Q96RD1 312 aa17.52■□□□□ 0.4
SHKBP1-227ENST00000602011 DEF6Q9H4E7 631 aa17.52■□□□□ 0.4
SHKBP1-227ENST00000602011 PDE7BQ9NP56 450 aa17.52■□□□□ 0.4
SHKBP1-227ENST00000602011 DDX56Q9NY93 547 aaKnown RBP17.52■□□□□ 0.4
SHKBP1-227ENST00000602011 OGFRQ9NZT2 677 aa17.52■□□□□ 0.4
SHKBP1-227ENST00000602011 HACD3Q9P035 362 aa17.52■□□□□ 0.4
SHKBP1-227ENST00000602011 SEMA5BQ9P283 1151 aa17.52■□□□□ 0.4
SHKBP1-227ENST00000602011 SLC23A2Q9UGH3 650 aa17.52■□□□□ 0.4
SHKBP1-227ENST00000602011 POLHQ9Y253 713 aa17.52■□□□□ 0.4
SHKBP1-227ENST00000602011 C21orf140B9A014 251 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms