RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 CDK14O94921 469 aa12.49□□□□□ -0.41
CHMP2A-206ENST00000600118 ASMTLO95671 621 aa12.49□□□□□ -0.41
CHMP2A-206ENST00000600118 LMNAP02545 664 aaKnown RBP12.49□□□□□ -0.41
CHMP2A-206ENST00000600118 F7P08709 466 aaPredicted RBP12.49□□□□□ -0.41
CHMP2A-206ENST00000600118 RALBP11234 206 aa12.49□□□□□ -0.41
CHMP2A-206ENST00000600118 ATP1B2P14415 290 aaPredicted RBP12.49□□□□□ -0.41
CHMP2A-206ENST00000600118 ZNF7P17097 686 aaPredicted RBP12.49□□□□□ -0.41
CHMP2A-206ENST00000600118 MSH3P20585 1137 aa12.49□□□□□ -0.41
CHMP2A-206ENST00000600118 RPS3P23396 243 aaKnown RBP eCLIP12.49□□□□□ -0.413e-6■■■□□ 16.9
CHMP2A-206ENST00000600118 AKT1P31749 480 aa12.49□□□□□ -0.41
CHMP2A-206ENST00000600118 HSD17B3P37058 310 aa12.49□□□□□ -0.41
CHMP2A-206ENST00000600118 CTSCP53634 463 aa12.49□□□□□ -0.41
CHMP2A-206ENST00000600118 C21orf59P57076 290 aa12.49□□□□□ -0.41
CHMP2A-206ENST00000600118 SRP54P61011 504 aaKnown RBP12.49□□□□□ -0.41
CHMP2A-206ENST00000600118 NAB1Q13506 487 aa12.49□□□□□ -0.41
CHMP2A-206ENST00000600118 SLC29A2Q14542 456 aa12.49□□□□□ -0.41
CHMP2A-206ENST00000600118 MAP9Q49MG5 647 aa12.49□□□□□ -0.41
CHMP2A-206ENST00000600118 TRIM61Q5EBN2 209 aa12.49□□□□□ -0.41
CHMP2A-206ENST00000600118 DOK6Q6PKX4 331 aa12.49□□□□□ -0.41
CHMP2A-206ENST00000600118 ENPP7Q6UWV6 458 aa12.49□□□□□ -0.41
CHMP2A-206ENST00000600118 MARK2Q7KZI7 788 aaKnown RBP12.49□□□□□ -0.41
CHMP2A-206ENST00000600118 LRRC6Q86X45 466 aa12.49□□□□□ -0.41
CHMP2A-206ENST00000600118 ZNF547Q8IVP9 402 aa12.49□□□□□ -0.41
CHMP2A-206ENST00000600118 CLDN19Q8N6F1 224 aa12.49□□□□□ -0.41
CHMP2A-206ENST00000600118 CDKL2Q92772 493 aa12.49□□□□□ -0.41
CHMP2A-206ENST00000600118 DCUN1D1Q96GG9 259 aa12.49□□□□□ -0.41
CHMP2A-206ENST00000600118 CYTH2Q99418 400 aa12.49□□□□□ -0.41
CHMP2A-206ENST00000600118 FBXO6Q9NRD1 293 aaPredicted RBP12.49□□□□□ -0.41
CHMP2A-206ENST00000600118 NSMCE4AQ9NXX6 385 aa12.49□□□□□ -0.41
CHMP2A-206ENST00000600118 ZFATQ9P243 1243 aa12.49□□□□□ -0.41
CHMP2A-206ENST00000600118 KLQ9UEF7 1012 aa12.49□□□□□ -0.41
CHMP2A-206ENST00000600118 KLF15Q9UIH9 416 aa12.49□□□□□ -0.41
CHMP2A-206ENST00000600118 VPS9D1Q9Y2B5 631 aa12.49□□□□□ -0.41
CHMP2A-206ENST00000600118 PSAT1Q9Y617 370 aa12.49□□□□□ -0.41
CHMP2A-206ENST00000600118 PRSS21Q9Y6M0 314 aa12.49□□□□□ -0.41
CHMP2A-206ENST00000600118 SPAG17Q6Q759 2223 aa12.49□□□□□ -0.41
CHMP2A-206ENST00000600118 SDK1Q7Z5N4 2213 aa12.48□□□□□ -0.41
CHMP2A-206ENST00000600118 A0A087WUV0 522 aaPredicted RBP12.48□□□□□ -0.41
CHMP2A-206ENST00000600118 PRSS38A1L453 326 aa12.48□□□□□ -0.41
CHMP2A-206ENST00000600118 PFDN6O15212 129 aa12.48□□□□□ -0.41
CHMP2A-206ENST00000600118 HAUS5O94927 633 aa12.48□□□□□ -0.41
CHMP2A-206ENST00000600118 AP2A2O94973 939 aa12.48□□□□□ -0.41
CHMP2A-206ENST00000600118 AHSGP02765 367 aa12.48□□□□□ -0.41
CHMP2A-206ENST00000600118 CSF2P04141 144 aa12.48□□□□□ -0.41
CHMP2A-206ENST00000600118 CFIP05156 583 aa12.48□□□□□ -0.41
CHMP2A-206ENST00000600118 NME1P15531 152 aaKnown RBP12.48□□□□□ -0.41
CHMP2A-206ENST00000600118 GRIK2Q13002 908 aa12.48□□□□□ -0.41
CHMP2A-206ENST00000600118 EFTUD2Q15029 972 aaKnown RBP eCLIP12.48□□□□□ -0.412e-6■■■■■ 35.7
CHMP2A-206ENST00000600118 ZNF423Q2M1K9 1284 aa12.48□□□□□ -0.41
CHMP2A-206ENST00000600118 BCL7AQ4VC05 210 aa12.48□□□□□ -0.41
CHMP2A-206ENST00000600118 PYCR3Q53H96 274 aa12.48□□□□□ -0.41
CHMP2A-206ENST00000600118 CNSTQ6PJW8 725 aa12.48□□□□□ -0.41
CHMP2A-206ENST00000600118 C11orf96Q7Z7L8 435 aa12.48□□□□□ -0.41
CHMP2A-206ENST00000600118 NAT14Q8WUY8 206 aa12.48□□□□□ -0.41
CHMP2A-206ENST00000600118 HNRNPLLQ8WVV9 542 aaKnown RBP12.48□□□□□ -0.41
CHMP2A-206ENST00000600118 TSACCQ96A04 125 aaPredicted RBP12.48□□□□□ -0.41
CHMP2A-206ENST00000600118 SGF29Q96ES7 293 aa12.48□□□□□ -0.41
CHMP2A-206ENST00000600118 PDXPQ96GD0 296 aa12.48□□□□□ -0.41
CHMP2A-206ENST00000600118 ZNF514Q96K75 400 aaPredicted RBP12.48□□□□□ -0.41
CHMP2A-206ENST00000600118 LINC00615Q96LM1 132 aaPredicted RBP12.48□□□□□ -0.41
CHMP2A-206ENST00000600118 BIRC8Q96P09 236 aa12.48□□□□□ -0.41
CHMP2A-206ENST00000600118 ZDHHC5Q9C0B5 715 aa12.48□□□□□ -0.41
CHMP2A-206ENST00000600118 MRPL40Q9NQ50 206 aaKnown RBP12.48□□□□□ -0.41
CHMP2A-206ENST00000600118 GMEB2Q9UKD1 530 aa12.48□□□□□ -0.41
CHMP2A-206ENST00000600118 SUFUQ9UMX1 484 aa12.48□□□□□ -0.41
CHMP2A-206ENST00000600118 GPR34Q9UPC5 381 aa12.48□□□□□ -0.41
CHMP2A-206ENST00000600118 SNX11Q9Y5W9 270 aa12.48□□□□□ -0.41
CHMP2A-206ENST00000600118 CEP192Q8TEP8 1941 aa12.48□□□□□ -0.41
CHMP2A-206ENST00000600118 BPTFQ12830 3046 aa12.47□□□□□ -0.41
CHMP2A-206ENST00000600118 PRR19A6NJB7 356 aa12.47□□□□□ -0.41
CHMP2A-206ENST00000600118 GRID2O43424 1007 aa12.47□□□□□ -0.41
CHMP2A-206ENST00000600118 ERLIN1O75477 346 aa12.47□□□□□ -0.41
CHMP2A-206ENST00000600118 RASGRP1O95267 797 aa12.47□□□□□ -0.41
CHMP2A-206ENST00000600118 ESR1P03372 595 aa12.47□□□□□ -0.41
CHMP2A-206ENST00000600118 ZNF806P0C7X5 589 aa12.47□□□□□ -0.41
CHMP2A-206ENST00000600118 H2AFXP16104 143 aaPredicted RBP12.47□□□□□ -0.41
CHMP2A-206ENST00000600118 RXRGP48443 463 aa12.47□□□□□ -0.41
CHMP2A-206ENST00000600118 CD151P48509 253 aa12.47□□□□□ -0.41
CHMP2A-206ENST00000600118 PRLHRP49683 370 aa12.47□□□□□ -0.41
CHMP2A-206ENST00000600118 HK3P52790 923 aa12.47□□□□□ -0.41
CHMP2A-206ENST00000600118 CSE1LP55060 971 aaKnown RBP12.47□□□□□ -0.41
CHMP2A-206ENST00000600118 IRX4P78413 519 aa12.47□□□□□ -0.41
CHMP2A-206ENST00000600118 PPARDQ03181 441 aa12.47□□□□□ -0.41
CHMP2A-206ENST00000600118 GTF2H3Q13889 308 aa12.47□□□□□ -0.41
CHMP2A-206ENST00000600118 SHBQ15464 509 aa12.47□□□□□ -0.41
CHMP2A-206ENST00000600118 CCDC6Q16204 474 aa12.47□□□□□ -0.41
CHMP2A-206ENST00000600118 KLHL38Q2WGJ6 581 aa12.47□□□□□ -0.41
CHMP2A-206ENST00000600118 ZNF658BQ4V348 819 aaPredicted RBP12.47□□□□□ -0.41
CHMP2A-206ENST00000600118 CTSL3PQ5NE16 218 aa12.47□□□□□ -0.41
CHMP2A-206ENST00000600118 BEND6Q5SZJ8 279 aaPredicted RBP12.47□□□□□ -0.41
CHMP2A-206ENST00000600118 ZNF549Q6P9A3 640 aa12.47□□□□□ -0.41
CHMP2A-206ENST00000600118 TMEM220Q6QAJ8 160 aa12.47□□□□□ -0.41
CHMP2A-206ENST00000600118 DET1Q7L5Y6 550 aa12.47□□□□□ -0.41
CHMP2A-206ENST00000600118 STRA8Q7Z7C7 330 aa12.47□□□□□ -0.41
CHMP2A-206ENST00000600118 ZC3HC1Q86WB0 502 aaKnown RBP12.47□□□□□ -0.41
CHMP2A-206ENST00000600118 HID1Q8IV36 788 aa12.47□□□□□ -0.41
CHMP2A-206ENST00000600118 CTAGE3PQ8IX95 158 aa12.47□□□□□ -0.41
CHMP2A-206ENST00000600118 PHACTR4Q8IZ21 702 aa12.47□□□□□ -0.41
CHMP2A-206ENST00000600118 OXR1Q8N573 874 aa12.47□□□□□ -0.41
CHMP2A-206ENST00000600118 PPM1NQ8N819 430 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms