RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 SCHIP1Q9P0W5 487 aaPredicted RBP22.32■■□□□ 1.16
SSBP4-203ENST00000593641 RPS6KL1Q9Y6S9 549 aa22.32■■□□□ 1.16
SSBP4-203ENST00000593641 SYCE3A1L190 88 aa22.31■■□□□ 1.16
SSBP4-203ENST00000593641 ZNF487B1APH4 448 aa22.31■■□□□ 1.16
SSBP4-203ENST00000593641 APOL1O14791 398 aa22.31■■□□□ 1.16
SSBP4-203ENST00000593641 TOX3O15405 576 aaPredicted RBP22.31■■□□□ 1.16
SSBP4-203ENST00000593641 RASSF9O75901 435 aa22.31■■□□□ 1.16
SSBP4-203ENST00000593641 ZNF7P17097 686 aaPredicted RBP22.31■■□□□ 1.16
SSBP4-203ENST00000593641 CASRP41180 1078 aa22.31■■□□□ 1.16
SSBP4-203ENST00000593641 CDK18Q07002 472 aa22.31■■□□□ 1.16
SSBP4-203ENST00000593641 SLC9A4Q6AI14 798 aa22.31■■□□□ 1.16
SSBP4-203ENST00000593641 CCDC70Q6NSX1 233 aa22.31■■□□□ 1.16
SSBP4-203ENST00000593641 SLC25A51Q9H1U9 297 aa22.31■■□□□ 1.16
SSBP4-203ENST00000593641 OGFRQ9NZT2 677 aa22.31■■□□□ 1.16
SSBP4-203ENST00000593641 SLC23A2Q9UGH3 650 aa22.31■■□□□ 1.16
SSBP4-203ENST00000593641 PCDHB3Q9Y5E6 796 aa22.31■■□□□ 1.16
SSBP4-203ENST00000593641 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.31■■□□□ 1.16
SSBP4-203ENST00000593641 VEGFDO43915 354 aa22.3■■□□□ 1.16
SSBP4-203ENST00000593641 CDK14O94921 469 aa22.3■■□□□ 1.16
SSBP4-203ENST00000593641 SLC19A1P41440 591 aa22.3■■□□□ 1.16
SSBP4-203ENST00000593641 SEPHS1P49903 392 aa22.3■■□□□ 1.16
SSBP4-203ENST00000593641 ODF2Q5BJF6 829 aa22.3■■□□□ 1.16
SSBP4-203ENST00000593641 VSIG1Q86XK7 387 aa22.3■■□□□ 1.16
SSBP4-203ENST00000593641 SRPK1Q96SB4 655 aaKnown RBP22.3■■□□□ 1.16
SSBP4-203ENST00000593641 BRD8Q9H0E9 1235 aa22.3■■□□□ 1.16
SSBP4-203ENST00000593641 ZNF768Q9H5H4 540 aaKnown RBP22.3■■□□□ 1.16
SSBP4-203ENST00000593641 IFNKQ9P0W0 207 aa22.3■■□□□ 1.16
SSBP4-203ENST00000593641 ZNF624Q9P2J8 865 aaPredicted RBP22.3■■□□□ 1.16
SSBP4-203ENST00000593641 RELNP78509 3460 aa22.29■■□□□ 1.16
SSBP4-203ENST00000593641 MTX2O75431 263 aa22.29■■□□□ 1.16
SSBP4-203ENST00000593641 TPM3P06753 285 aa22.29■■□□□ 1.16
SSBP4-203ENST00000593641 TMEM253P0C7T8 217 aa22.29■■□□□ 1.16
SSBP4-203ENST00000593641 ZFXP17010 805 aaPredicted RBP22.29■■□□□ 1.16
SSBP4-203ENST00000593641 VCLP18206 1134 aa22.29■■□□□ 1.16
SSBP4-203ENST00000593641 RPL10P27635 214 aaKnown RBP22.29■■□□□ 1.16
SSBP4-203ENST00000593641 HNRNPH3P31942 346 aaKnown RBP22.29■■□□□ 1.16
SSBP4-203ENST00000593641 DLSTP36957 453 aa22.29■■□□□ 1.16
SSBP4-203ENST00000593641 CAPZBP47756 277 aa22.29■■□□□ 1.16
SSBP4-203ENST00000593641 SLC14A2Q15849 920 aa22.29■■□□□ 1.16
SSBP4-203ENST00000593641 COLEC12Q5KU26 742 aa22.29■■□□□ 1.16
SSBP4-203ENST00000593641 C6orf15Q6UXA7 325 aaPredicted RBP22.29■■□□□ 1.16
SSBP4-203ENST00000593641 RASGRP3Q8IV61 690 aa22.29■■□□□ 1.16
SSBP4-203ENST00000593641 RBM12BQ8IXT5 1001 aaKnown RBP22.29■■□□□ 1.16
SSBP4-203ENST00000593641 CXorf40BQ96DE9 158 aa22.29■■□□□ 1.16
SSBP4-203ENST00000593641 STAMBPL1Q96FJ0 436 aa22.29■■□□□ 1.16
SSBP4-203ENST00000593641 ABHD17AQ96GS6 310 aa22.29■■□□□ 1.16
SSBP4-203ENST00000593641 OR6C1Q96RD1 312 aa22.29■■□□□ 1.16
SSBP4-203ENST00000593641 KCTD3Q9Y597 815 aa22.29■■□□□ 1.16
SSBP4-203ENST00000593641 MRPS18BQ9Y676 258 aaKnown RBP22.29■■□□□ 1.16
SSBP4-203ENST00000593641 SLC30A1Q9Y6M5 507 aa22.29■■□□□ 1.16
SSBP4-203ENST00000593641 BPIP17213 487 aa22.28■■□□□ 1.16
SSBP4-203ENST00000593641 IDSP22304 550 aa22.28■■□□□ 1.16
SSBP4-203ENST00000593641 LEPRP48357 1165 aaKnown RBP22.28■■□□□ 1.16
SSBP4-203ENST00000593641 GTF2H3Q13889 308 aa22.28■■□□□ 1.16
SSBP4-203ENST00000593641 IL11RAQ14626 422 aa22.28■■□□□ 1.16
SSBP4-203ENST00000593641 LACTB2Q53H82 288 aaPredicted RBP22.28■■□□□ 1.16
SSBP4-203ENST00000593641 FAM182AQ5T1J6 154 aa22.28■■□□□ 1.16
SSBP4-203ENST00000593641 ATP1A1-AS1Q5TC04 95 aa22.28■■□□□ 1.16
SSBP4-203ENST00000593641 CYB5D1Q6P9G0 228 aa22.28■■□□□ 1.16
SSBP4-203ENST00000593641 ABRAXAS1Q6UWZ7 409 aa22.28■■□□□ 1.16
SSBP4-203ENST00000593641 RFX6Q8HWS3 928 aa22.28■■□□□ 1.16
SSBP4-203ENST00000593641 TRAPPC5Q8IUR0 188 aa22.28■■□□□ 1.16
SSBP4-203ENST00000593641 GDAP1Q8TB36 358 aa22.28■■□□□ 1.16
SSBP4-203ENST00000593641 ZDHHC12Q96GR4 267 aa22.28■■□□□ 1.16
SSBP4-203ENST00000593641 OLFM3Q96PB7 478 aa22.28■■□□□ 1.16
SSBP4-203ENST00000593641 VPS35Q96QK1 796 aa22.28■■□□□ 1.16
SSBP4-203ENST00000593641 ANP32EQ9BTT0 268 aa22.28■■□□□ 1.16
SSBP4-203ENST00000593641 CROTQ9UKG9 612 aa22.28■■□□□ 1.16
SSBP4-203ENST00000593641 A0A0A6YYK5 440 aaPredicted RBP22.27■■□□□ 1.16
SSBP4-203ENST00000593641 OR52A4PA6NMU1 304 aa22.27■■□□□ 1.16
SSBP4-203ENST00000593641 NDUFA10O95299 355 aa22.27■■□□□ 1.16
SSBP4-203ENST00000593641 NDST3O95803 873 aa22.27■■□□□ 1.16
SSBP4-203ENST00000593641 MT-CYBP00156 380 aaPredicted RBP22.27■■□□□ 1.16
SSBP4-203ENST00000593641 KRT1P04264 644 aa22.27■■□□□ 1.16
SSBP4-203ENST00000593641 ZNF28P17035 718 aa22.27■■□□□ 1.16
SSBP4-203ENST00000593641 SH3BP2P78314 561 aa22.27■■□□□ 1.16
SSBP4-203ENST00000593641 NPNTQ6UXI9 565 aa22.27■■□□□ 1.16
SSBP4-203ENST00000593641 WASH2PQ6VEQ5 465 aa22.27■■□□□ 1.16
SSBP4-203ENST00000593641 PRSS42Q7Z5A4 293 aa22.27■■□□□ 1.16
SSBP4-203ENST00000593641 ZNF547Q8IVP9 402 aa22.27■■□□□ 1.16
SSBP4-203ENST00000593641 RP1L1Q8IWN7 2480 aaPredicted RBP22.27■■□□□ 1.16
SSBP4-203ENST00000593641 GALNT6Q8NCL4 622 aa22.27■■□□□ 1.16
SSBP4-203ENST00000593641 SPATA22Q8NHS9 363 aa22.27■■□□□ 1.16
SSBP4-203ENST00000593641 SLC35G2Q8TBE7 412 aa22.27■■□□□ 1.16
SSBP4-203ENST00000593641 RSC1A1Q92681 617 aa22.27■■□□□ 1.16
SSBP4-203ENST00000593641 WASH6PQ9NQA3 447 aa22.27■■□□□ 1.16
SSBP4-203ENST00000593641 C3orf70A6NLC5 250 aaPredicted RBP22.26■■□□□ 1.15
SSBP4-203ENST00000593641 AKR1B10O60218 316 aa22.26■■□□□ 1.15
SSBP4-203ENST00000593641 PMPCBO75439 489 aa22.26■■□□□ 1.15
SSBP4-203ENST00000593641 KIAA0754O94854 1291 aa22.26■■□□□ 1.15
SSBP4-203ENST00000593641 BRAFP15056 766 aa22.26■■□□□ 1.15
SSBP4-203ENST00000593641 ARHGAP25P42331 645 aa22.26■■□□□ 1.15
SSBP4-203ENST00000593641 HALP42357 657 aa22.26■■□□□ 1.15
SSBP4-203ENST00000593641 TNNT3P45378 269 aaPredicted RBP22.26■■□□□ 1.15
SSBP4-203ENST00000593641 DRG2P55039 364 aaKnown RBP22.26■■□□□ 1.15
SSBP4-203ENST00000593641 DYNLT1P63172 113 aa22.26■■□□□ 1.15
SSBP4-203ENST00000593641 FOXK1P85037 733 aa22.26■■□□□ 1.15
SSBP4-203ENST00000593641 GPR18Q14330 331 aa22.26■■□□□ 1.15
SSBP4-203ENST00000593641 TEX44Q53QW1 395 aa22.26■■□□□ 1.15
SSBP4-203ENST00000593641 AGAP9Q5VTM2 703 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms