RNA–Protein interactions for RNA: ENST00000591645.1

TPM4-214, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-214ENST00000591645 ST6GAL2Q96JF0 529 aa3.37□□□□□ -1.87
TPM4-214ENST00000591645 HARBI1Q96MB7 349 aa3.37□□□□□ -1.87
TPM4-214ENST00000591645 LITAFQ99732 161 aa3.37□□□□□ -1.87
TPM4-214ENST00000591645 TREX2Q9BQ50 279 aaPredicted RBP3.37□□□□□ -1.87
TPM4-214ENST00000591645 SDF4Q9BRK5 362 aa3.37□□□□□ -1.87
TPM4-214ENST00000591645 PCGF1Q9BSM1 259 aa3.37□□□□□ -1.87
TPM4-214ENST00000591645 STRA6Q9BX79 667 aa3.37□□□□□ -1.87
TPM4-214ENST00000591645 GFRA4Q9GZZ7 299 aa3.37□□□□□ -1.87
TPM4-214ENST00000591645 CCDC68Q9H2F9 335 aa3.37□□□□□ -1.87
TPM4-214ENST00000591645 RANBP17Q9H2T7 1088 aaKnown RBP3.37□□□□□ -1.87
TPM4-214ENST00000591645 PREBQ9HCU5 417 aa3.37□□□□□ -1.87
TPM4-214ENST00000591645 NSMCE4AQ9NXX6 385 aa3.37□□□□□ -1.87
TPM4-214ENST00000591645 NKIRAS2Q9NYR9 191 aa3.37□□□□□ -1.87
TPM4-214ENST00000591645 AASSQ9UDR5 926 aa3.37□□□□□ -1.87
TPM4-214ENST00000591645 FBXL2Q9UKC9 423 aa3.37□□□□□ -1.87
TPM4-214ENST00000591645 INTS6Q9UL03 887 aaKnown RBP3.37□□□□□ -1.87
TPM4-214ENST00000591645 URB2Q14146 1524 aaKnown RBP3.37□□□□□ -1.87
TPM4-214ENST00000591645 BAZ1BQ9UIG0 1483 aaKnown RBP3.36□□□□□ -1.87
TPM4-214ENST00000591645 FAM90A26D6RGX4 464 aa3.36□□□□□ -1.87
TPM4-214ENST00000591645 BLOC1S5-TXNDC5H3BN57 136 aa3.36□□□□□ -1.87
TPM4-214ENST00000591645 KCNN4O15554 427 aa3.36□□□□□ -1.87
TPM4-214ENST00000591645 PCDH7O60245 1069 aa3.36□□□□□ -1.87
TPM4-214ENST00000591645 PLOD3O60568 738 aa3.36□□□□□ -1.87
TPM4-214ENST00000591645 TBX18O95935 607 aa3.36□□□□□ -1.87
TPM4-214ENST00000591645 RPN1P04843 607 aaKnown RBP3.36□□□□□ -1.87
TPM4-214ENST00000591645 ZNF182P17025 639 aaPredicted RBP3.36□□□□□ -1.87
TPM4-214ENST00000591645 NR1D1P20393 614 aa3.36□□□□□ -1.87
TPM4-214ENST00000591645 ABCD3P28288 659 aa3.36□□□□□ -1.87
TPM4-214ENST00000591645 EPHA8P29322 1005 aaPredicted RBP3.36□□□□□ -1.87
TPM4-214ENST00000591645 AHRP35869 848 aa3.36□□□□□ -1.87
TPM4-214ENST00000591645 PIP4K2AP48426 406 aaPredicted RBP3.36□□□□□ -1.87
TPM4-214ENST00000591645 CLDN20P56880 219 aa3.36□□□□□ -1.87
TPM4-214ENST00000591645 PLIN5Q00G26 463 aa3.36□□□□□ -1.87
TPM4-214ENST00000591645 MAD2L1Q13257 205 aaPredicted RBP3.36□□□□□ -1.87
TPM4-214ENST00000591645 ZNF876PQ49A33 203 aa3.36□□□□□ -1.87
TPM4-214ENST00000591645 CXorf66Q5JRM2 361 aaPredicted RBP3.36□□□□□ -1.87
TPM4-214ENST00000591645 SPECC1Q5M775 1068 aa3.36□□□□□ -1.87
TPM4-214ENST00000591645 FAM69AQ5T7M9 428 aa3.36□□□□□ -1.87
TPM4-214ENST00000591645 SLC9C2Q5TAH2 1124 aa3.36□□□□□ -1.87
TPM4-214ENST00000591645 C18orf63Q68DL7 685 aa3.36□□□□□ -1.87
TPM4-214ENST00000591645 OR7E24Q6IFN5 339 aa3.36□□□□□ -1.87
TPM4-214ENST00000591645 ARHGAP11AQ6P4F7 1023 aa3.36□□□□□ -1.87
TPM4-214ENST00000591645 FAM171BQ6P995 826 aa3.36□□□□□ -1.87
TPM4-214ENST00000591645 SLC27A1Q6PCB7 646 aa3.36□□□□□ -1.87
TPM4-214ENST00000591645 PAPD4Q6PIY7 484 aaKnown RBP3.36□□□□□ -1.87
TPM4-214ENST00000591645 CEACAM20Q6UY09 585 aa3.36□□□□□ -1.87
TPM4-214ENST00000591645 PLEKHM3Q6ZWE6 761 aa3.36□□□□□ -1.87
TPM4-214ENST00000591645 SRBD1Q8N5C6 995 aaKnown RBP3.36□□□□□ -1.87
TPM4-214ENST00000591645 OR52I2Q8NH67 350 aa3.36□□□□□ -1.87
TPM4-214ENST00000591645 PSPC1Q8WXF1 523 aaKnown RBP3.36□□□□□ -1.87
TPM4-214ENST00000591645 DNAAF4Q8WXU2 420 aa3.36□□□□□ -1.87
TPM4-214ENST00000591645 RFFLQ8WZ73 363 aa3.36□□□□□ -1.87
TPM4-214ENST00000591645 ST8SIA4Q92187 359 aa3.36□□□□□ -1.87
TPM4-214ENST00000591645 GTF3C6Q969F1 213 aa3.36□□□□□ -1.87
TPM4-214ENST00000591645 IGSF8Q969P0 613 aa3.36□□□□□ -1.87
TPM4-214ENST00000591645 RRNAD1Q96FB5 475 aaKnown RBP3.36□□□□□ -1.87
TPM4-214ENST00000591645 CHCHD6Q9BRQ6 235 aa3.36□□□□□ -1.87
TPM4-214ENST00000591645 AP1M1Q9BXS5 423 aa3.36□□□□□ -1.87
TPM4-214ENST00000591645 SLC25A18Q9H1K4 315 aa3.36□□□□□ -1.87
TPM4-214ENST00000591645 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.36□□□□□ -1.87
TPM4-214ENST00000591645 ZNF624Q9P2J8 865 aaPredicted RBP3.36□□□□□ -1.87
TPM4-214ENST00000591645 UBA2Q9UBT2 640 aaPredicted RBP3.36□□□□□ -1.87
TPM4-214ENST00000591645 ARHGAP26Q9UNA1 814 aa3.36□□□□□ -1.87
TPM4-214ENST00000591645 FAF1Q9UNN5 650 aaPredicted RBP3.36□□□□□ -1.87
TPM4-214ENST00000591645 MMP24Q9Y5R2 645 aa3.36□□□□□ -1.87
TPM4-214ENST00000591645 CAPN7Q9Y6W3 813 aa3.36□□□□□ -1.87
TPM4-214ENST00000591645 SYNJ1O43426 1573 aa3.36□□□□□ -1.87
TPM4-214ENST00000591645 LRP5O75197 1615 aa3.36□□□□□ -1.87
TPM4-214ENST00000591645 SMARCA4P51532 1647 aa3.36□□□□□ -1.87
TPM4-214ENST00000591645 STRCQ7RTU9 1775 aa3.35□□□□□ -1.87
TPM4-214ENST00000591645 FAM237AA0A1B0GTK4 181 aa3.35□□□□□ -1.87
TPM4-214ENST00000591645 A0A1W2PP11 408 aa3.35□□□□□ -1.87
TPM4-214ENST00000591645 B4DLN1 442 aa3.35□□□□□ -1.87
TPM4-214ENST00000591645 M0QZ24 198 aa3.35□□□□□ -1.87
TPM4-214ENST00000591645 HS3ST1O14792 307 aa3.35□□□□□ -1.87
TPM4-214ENST00000591645 EIF3DO15371 548 aaKnown RBP eCLIP3.35□□□□□ -1.87
TPM4-214ENST00000591645 PDE9AO76083 593 aa3.35□□□□□ -1.87
TPM4-214ENST00000591645 PATE4P0C8F1 98 aa3.35□□□□□ -1.87
TPM4-214ENST00000591645 ATP1A3P13637 1013 aa3.35□□□□□ -1.87
TPM4-214ENST00000591645 CALRP27797 417 aaKnown RBP3.35□□□□□ -1.87
TPM4-214ENST00000591645 CTCFP49711 727 aaPredicted RBP3.35□□□□□ -1.87
TPM4-214ENST00000591645 TUBP50607 506 aa3.35□□□□□ -1.87
TPM4-214ENST00000591645 HSD17B4P51659 736 aa3.35□□□□□ -1.87
TPM4-214ENST00000591645 PSMD6Q15008 389 aa3.35□□□□□ -1.87
TPM4-214ENST00000591645 C14orf177Q52M58 125 aa3.35□□□□□ -1.87
TPM4-214ENST00000591645 LCN10Q6JVE6 187 aa3.35□□□□□ -1.87
TPM4-214ENST00000591645 CDC73Q6P1J9 531 aa3.35□□□□□ -1.87
TPM4-214ENST00000591645 DGLUCYQ7Z3D6 616 aa3.35□□□□□ -1.87
TPM4-214ENST00000591645 GALNT5Q7Z7M9 940 aa3.35□□□□□ -1.87
TPM4-214ENST00000591645 TM9SF4Q92544 642 aa3.35□□□□□ -1.87
TPM4-214ENST00000591645 LINGO1Q96FE5 620 aa3.35□□□□□ -1.87
TPM4-214ENST00000591645 RSRC1Q96IZ7 334 aaKnown RBP3.35□□□□□ -1.87
TPM4-214ENST00000591645 TMEM68Q96MH6 324 aa3.35□□□□□ -1.87
TPM4-214ENST00000591645 C7orf26Q96N11 449 aa3.35□□□□□ -1.87
TPM4-214ENST00000591645 PDCL3Q9H2J4 239 aa3.35□□□□□ -1.87
TPM4-214ENST00000591645 TFB2MQ9H5Q4 396 aaKnown RBP3.35□□□□□ -1.87
TPM4-214ENST00000591645 MAGIXQ9H6Y5 334 aa3.35□□□□□ -1.87
TPM4-214ENST00000591645 KIF9Q9HAQ2 790 aa3.35□□□□□ -1.87
TPM4-214ENST00000591645 KLHL20Q9Y2M5 609 aa3.35□□□□□ -1.87
TPM4-214ENST00000591645 SETD1AO15047 1707 aaKnown RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms