RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 CTNNBL1Q8WYA6 563 aaPredicted RBP17.08■□□□□ 0.32
RETREG3-210ENST00000590541 TCTN2Q96GX1 697 aa17.08■□□□□ 0.32
RETREG3-210ENST00000590541 DEF6Q9H4E7 631 aa17.08■□□□□ 0.32
RETREG3-210ENST00000590541 AKIRIN1Q9H9L7 192 aaPredicted RBP17.08■□□□□ 0.32
RETREG3-210ENST00000590541 PCDH18Q9HCL0 1135 aa17.08■□□□□ 0.32
RETREG3-210ENST00000590541 NENFQ9UMX5 172 aa17.08■□□□□ 0.32
RETREG3-210ENST00000590541 KIF1CO43896 1103 aaKnown RBP17.07■□□□□ 0.32
RETREG3-210ENST00000590541 UBXN7O94888 489 aa17.07■□□□□ 0.32
RETREG3-210ENST00000590541 MT-ND3P03897 115 aa17.07■□□□□ 0.32
RETREG3-210ENST00000590541 AMPD1P23109 780 aa17.07■□□□□ 0.32
RETREG3-210ENST00000590541 KRT81Q14533 505 aa17.07■□□□□ 0.32
RETREG3-210ENST00000590541 UGT8Q16880 541 aa17.07■□□□□ 0.32
RETREG3-210ENST00000590541 TMEM26Q6ZUK4 368 aa17.07■□□□□ 0.32
RETREG3-210ENST00000590541 PPP1R3BQ86XI6 285 aa17.07■□□□□ 0.32
RETREG3-210ENST00000590541 MAP7D3Q8IWC1 876 aa17.07■□□□□ 0.32
RETREG3-210ENST00000590541 Q8NA96 180 aa17.07■□□□□ 0.32
RETREG3-210ENST00000590541 AVL9Q8NBF6 648 aa17.07■□□□□ 0.32
RETREG3-210ENST00000590541 PRR7Q8TB68 274 aa17.07■□□□□ 0.32
RETREG3-210ENST00000590541 FAM71BQ8TC56 605 aa17.07■□□□□ 0.32
RETREG3-210ENST00000590541 THAP4Q8WY91 577 aa17.07■□□□□ 0.32
RETREG3-210ENST00000590541 RMI1Q9H9A7 625 aa17.07■□□□□ 0.32
RETREG3-210ENST00000590541 ETNK2Q9NVF9 386 aa17.07■□□□□ 0.32
RETREG3-210ENST00000590541 CTTNBP2NLQ9P2B4 639 aa17.07■□□□□ 0.32
RETREG3-210ENST00000590541 ERRFI1Q9UJM3 462 aaPredicted RBP17.07■□□□□ 0.32
RETREG3-210ENST00000590541 FADS2P1A8MWK0 482 aa17.06■□□□□ 0.32
RETREG3-210ENST00000590541 NUAK1O60285 661 aa17.06■□□□□ 0.32
RETREG3-210ENST00000590541 CLDN7O95471 211 aa17.06■□□□□ 0.32
RETREG3-210ENST00000590541 LDLRP01130 860 aa17.06■□□□□ 0.32
RETREG3-210ENST00000590541 TCF4P15884 667 aa17.06■□□□□ 0.32
RETREG3-210ENST00000590541 XRCC1P18887 633 aaPredicted RBP17.06■□□□□ 0.32
RETREG3-210ENST00000590541 MMP13P45452 471 aa17.06■□□□□ 0.32
RETREG3-210ENST00000590541 CCL11P51671 97 aa17.06■□□□□ 0.32
RETREG3-210ENST00000590541 CLCNKAP51800 687 aa17.06■□□□□ 0.32
RETREG3-210ENST00000590541 CDH6P55285 790 aa17.06■□□□□ 0.32
RETREG3-210ENST00000590541 RPS18P62269 152 aaKnown RBP17.06■□□□□ 0.32
RETREG3-210ENST00000590541 LAMB3Q13751 1172 aa17.06■□□□□ 0.32
RETREG3-210ENST00000590541 IHHQ14623 411 aa17.06■□□□□ 0.32
RETREG3-210ENST00000590541 PDK2Q15119 407 aa17.06■□□□□ 0.32
RETREG3-210ENST00000590541 FAM199XQ6PEV8 388 aaPredicted RBP17.06■□□□□ 0.32
RETREG3-210ENST00000590541 PRSS42Q7Z5A4 293 aa17.06■□□□□ 0.32
RETREG3-210ENST00000590541 NDUFAF2Q8N183 169 aa17.06■□□□□ 0.32
RETREG3-210ENST00000590541 ATPAF2Q8N5M1 289 aa17.06■□□□□ 0.32
RETREG3-210ENST00000590541 KLHL6Q8WZ60 621 aa17.06■□□□□ 0.32
RETREG3-210ENST00000590541 HAUS2Q9NVX0 235 aa17.06■□□□□ 0.32
RETREG3-210ENST00000590541 LUZP4Q9P127 313 aa17.06■□□□□ 0.32
RETREG3-210ENST00000590541 ZNF624Q9P2J8 865 aaPredicted RBP17.06■□□□□ 0.32
RETREG3-210ENST00000590541 CENPEQ02224 2701 aa17.06■□□□□ 0.32
RETREG3-210ENST00000590541 CRYBG3Q68DQ2 2970 aa17.06■□□□□ 0.32
RETREG3-210ENST00000590541 LRBAP50851 2863 aa17.06■□□□□ 0.32
RETREG3-210ENST00000590541 HIVEP3Q5T1R4 2406 aa17.06■□□□□ 0.32
RETREG3-210ENST00000590541 ARGFXA6NJG6 315 aa17.05■□□□□ 0.32
RETREG3-210ENST00000590541 GRID2O43424 1007 aa17.05■□□□□ 0.32
RETREG3-210ENST00000590541 AKR1B10O60218 316 aa17.05■□□□□ 0.32
RETREG3-210ENST00000590541 RASSF9O75901 435 aa17.05■□□□□ 0.32
RETREG3-210ENST00000590541 PROSCO94903 275 aa17.05■□□□□ 0.32
RETREG3-210ENST00000590541 TMEM253P0C7T8 217 aa17.05■□□□□ 0.32
RETREG3-210ENST00000590541 AMD1P17707 334 aa17.05■□□□□ 0.32
RETREG3-210ENST00000590541 POU3F2P20265 443 aaPredicted RBP17.05■□□□□ 0.32
RETREG3-210ENST00000590541 TNFRSF8P28908 595 aa17.05■□□□□ 0.32
RETREG3-210ENST00000590541 SLC19A1P41440 591 aa17.05■□□□□ 0.32
RETREG3-210ENST00000590541 SSR1P43307 286 aaKnown RBP17.05■□□□□ 0.32
RETREG3-210ENST00000590541 IL10RAQ13651 578 aa17.05■□□□□ 0.32
RETREG3-210ENST00000590541 ASTE1Q2TB18 679 aaPredicted RBP17.05■□□□□ 0.32
RETREG3-210ENST00000590541 HENMT1Q5T8I9 393 aaKnown RBP17.05■□□□□ 0.32
RETREG3-210ENST00000590541 MARC1Q5VT66 337 aa17.05■□□□□ 0.32
RETREG3-210ENST00000590541 JMJD6Q6NYC1 403 aaPredicted RBP17.05■□□□□ 0.32
RETREG3-210ENST00000590541 PHYKPLQ8IUZ5 450 aa17.05■□□□□ 0.32
RETREG3-210ENST00000590541 VSTM4Q8IW00 320 aa17.05■□□□□ 0.32
RETREG3-210ENST00000590541 SEC14L1Q92503 715 aa17.05■□□□□ 0.32
RETREG3-210ENST00000590541 RSC1A1Q92681 617 aa17.05■□□□□ 0.32
RETREG3-210ENST00000590541 BTBD6Q96KE9 485 aa17.05■□□□□ 0.32
RETREG3-210ENST00000590541 ING2Q9H160 280 aa17.05■□□□□ 0.32
RETREG3-210ENST00000590541 ACSS2Q9NR19 701 aa17.05■□□□□ 0.32
RETREG3-210ENST00000590541 KLC4Q9NSK0 619 aa17.05■□□□□ 0.32
RETREG3-210ENST00000590541 ADGRG1Q9Y653 693 aa17.05■□□□□ 0.32
RETREG3-210ENST00000590541 CSMD1Q96PZ7 3565 aa17.05■□□□□ 0.32
RETREG3-210ENST00000590541 DOPEY1Q5JWR5 2465 aa17.05■□□□□ 0.32
RETREG3-210ENST00000590541 VIPP01282 170 aa17.04■□□□□ 0.32
RETREG3-210ENST00000590541 PTPN4P29074 926 aa17.04■□□□□ 0.32
RETREG3-210ENST00000590541 CACHD1Q5VU97 1274 aa17.04■□□□□ 0.32
RETREG3-210ENST00000590541 TXNRD3NBQ6F5E7 133 aa17.04■□□□□ 0.32
RETREG3-210ENST00000590541 PWWP2BQ6NUJ5 590 aa17.04■□□□□ 0.32
RETREG3-210ENST00000590541 SYVN1Q86TM6 617 aa17.04■□□□□ 0.32
RETREG3-210ENST00000590541 CNGA4Q8IV77 575 aa17.04■□□□□ 0.32
RETREG3-210ENST00000590541 RAVER1Q8IY67 606 aaKnown RBP17.04■□□□□ 0.32
RETREG3-210ENST00000590541 TEX26Q8N6G2 289 aa17.04■□□□□ 0.32
RETREG3-210ENST00000590541 KCTD6Q8NC69 237 aa17.04■□□□□ 0.32
RETREG3-210ENST00000590541 CCDC42Q96M95 316 aa17.04■□□□□ 0.32
RETREG3-210ENST00000590541 ZNF670Q9BS34 389 aa17.04■□□□□ 0.32
RETREG3-210ENST00000590541 ANP32EQ9BTT0 268 aa17.04■□□□□ 0.32
RETREG3-210ENST00000590541 GPR87Q9BY21 358 aa17.04■□□□□ 0.32
RETREG3-210ENST00000590541 SLC29A3Q9BZD2 475 aa17.04■□□□□ 0.32
RETREG3-210ENST00000590541 CARD9Q9H257 536 aa17.04■□□□□ 0.32
RETREG3-210ENST00000590541 NT5MQ9NPB1 228 aa17.04■□□□□ 0.32
RETREG3-210ENST00000590541 ABHD10Q9NUJ1 306 aa17.04■□□□□ 0.32
RETREG3-210ENST00000590541 ATXN10Q9UBB4 475 aa17.04■□□□□ 0.32
RETREG3-210ENST00000590541 ANKRD17O75179 2603 aaKnown RBP17.03■□□□□ 0.32
RETREG3-210ENST00000590541 ABCA12Q86UK0 2595 aa17.03■□□□□ 0.32
RETREG3-210ENST00000590541 CEACAM4O75871 244 aa17.03■□□□□ 0.32
RETREG3-210ENST00000590541 PRLP01236 227 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms