RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 PROSCO94903 275 aa18.12■□□□□ 0.49
CCDC43-204ENST00000588687 SLC25A14O95258 325 aaPredicted RBP18.12■□□□□ 0.49
CCDC43-204ENST00000588687 TIAF1O95411 115 aa18.12■□□□□ 0.49
CCDC43-204ENST00000588687 MBD3O95983 291 aa18.12■□□□□ 0.49
CCDC43-204ENST00000588687 JCHAINP01591 159 aa18.12■□□□□ 0.49
CCDC43-204ENST00000588687 PDGFAP04085 211 aa18.12■□□□□ 0.49
CCDC43-204ENST00000588687 SERPING1P05155 500 aa18.12■□□□□ 0.49
CCDC43-204ENST00000588687 PIRTP0C851 137 aa18.12■□□□□ 0.49
CCDC43-204ENST00000588687 SEPHS1P49903 392 aa18.12■□□□□ 0.49
CCDC43-204ENST00000588687 SEPT6Q14141 434 aa18.12■□□□□ 0.49
CCDC43-204ENST00000588687 IL11RAQ14626 422 aa18.12■□□□□ 0.49
CCDC43-204ENST00000588687 ABRAXAS1Q6UWZ7 409 aa18.12■□□□□ 0.49
CCDC43-204ENST00000588687 TMC3Q7Z5M5 1100 aa18.12■□□□□ 0.49
CCDC43-204ENST00000588687 FAM26EQ8N5C1 309 aa18.12■□□□□ 0.49
CCDC43-204ENST00000588687 KCTD6Q8NC69 237 aa18.12■□□□□ 0.49
CCDC43-204ENST00000588687 KLHL6Q8WZ60 621 aa18.12■□□□□ 0.49
CCDC43-204ENST00000588687 IMP4Q96G21 291 aaKnown RBP18.12■□□□□ 0.49
CCDC43-204ENST00000588687 ADGRE3Q9BY15 652 aa18.12■□□□□ 0.49
CCDC43-204ENST00000588687 SLC40A1Q9NP59 571 aa18.12■□□□□ 0.49
CCDC43-204ENST00000588687 SEMA5BQ9P283 1151 aa18.12■□□□□ 0.49
CCDC43-204ENST00000588687 SHOC2Q9UQ13 582 aa18.12■□□□□ 0.49
CCDC43-204ENST00000588687 ZNF711Q9Y462 761 aa18.12■□□□□ 0.49
CCDC43-204ENST00000588687 ICE1Q9Y2F5 2266 aa18.12■□□□□ 0.49
CCDC43-204ENST00000588687 NOTCH2Q04721 2471 aa18.11■□□□□ 0.49
CCDC43-204ENST00000588687 OR52A4PA6NMU1 304 aa18.11■□□□□ 0.49
CCDC43-204ENST00000588687 SMTNL1A8MU46 457 aa18.11■□□□□ 0.49
CCDC43-204ENST00000588687 MTSS1O43312 755 aa18.11■□□□□ 0.49
CCDC43-204ENST00000588687 MTX2O75431 263 aa18.11■□□□□ 0.49
CCDC43-204ENST00000588687 NDUFA10O95299 355 aa18.11■□□□□ 0.49
CCDC43-204ENST00000588687 VIPP01282 170 aa18.11■□□□□ 0.49
CCDC43-204ENST00000588687 ZNF7P17097 686 aaPredicted RBP18.11■□□□□ 0.49
CCDC43-204ENST00000588687 BPIP17213 487 aa18.11■□□□□ 0.49
CCDC43-204ENST00000588687 SSR1P43307 286 aaKnown RBP18.11■□□□□ 0.49
CCDC43-204ENST00000588687 PMS2P54278 862 aa18.11■□□□□ 0.49
CCDC43-204ENST00000588687 PPP1CAP62136 330 aa18.11■□□□□ 0.49
CCDC43-204ENST00000588687 GPR18Q14330 331 aa18.11■□□□□ 0.49
CCDC43-204ENST00000588687 SEPT7Q16181 437 aaKnown RBP18.11■□□□□ 0.49
CCDC43-204ENST00000588687 INSCQ1MX18 579 aa18.11■□□□□ 0.49
CCDC43-204ENST00000588687 AGAP9Q5VTM2 703 aa18.11■□□□□ 0.49
CCDC43-204ENST00000588687 ALKBH5Q6P6C2 394 aaKnown RBP18.11■□□□□ 0.49
CCDC43-204ENST00000588687 WASH2PQ6VEQ5 465 aa18.11■□□□□ 0.49
CCDC43-204ENST00000588687 LRRTM4Q86VH4 590 aa18.11■□□□□ 0.49
CCDC43-204ENST00000588687 LURAP1LQ8IV03 231 aa18.11■□□□□ 0.49
CCDC43-204ENST00000588687 RAPGEF5Q92565 580 aa18.11■□□□□ 0.49
CCDC43-204ENST00000588687 OLFM3Q96PB7 478 aa18.11■□□□□ 0.49
CCDC43-204ENST00000588687 CEP41Q9BYV8 373 aa18.11■□□□□ 0.49
CCDC43-204ENST00000588687 MAGEE1Q9HCI5 957 aa18.11■□□□□ 0.49
CCDC43-204ENST00000588687 WASH6PQ9NQA3 447 aa18.11■□□□□ 0.49
CCDC43-204ENST00000588687 EPHA6Q9UF33 1036 aa18.11■□□□□ 0.49
CCDC43-204ENST00000588687 RP1L1Q8IWN7 2480 aaPredicted RBP18.1■□□□□ 0.49
CCDC43-204ENST00000588687 TNRC6AQ8NDV7 1962 aaKnown RBP18.1■□□□□ 0.49
CCDC43-204ENST00000588687 C3orf70A6NLC5 250 aaPredicted RBP18.1■□□□□ 0.49
CCDC43-204ENST00000588687 KMOO15229 486 aa18.1■□□□□ 0.49
CCDC43-204ENST00000588687 NTRK1P04629 796 aa18.1■□□□□ 0.49
CCDC43-204ENST00000588687 LAMB3Q13751 1172 aa18.1■□□□□ 0.49
CCDC43-204ENST00000588687 ERV3-1Q14264 604 aa18.1■□□□□ 0.49
CCDC43-204ENST00000588687 SLC14A2Q15849 920 aa18.1■□□□□ 0.49
CCDC43-204ENST00000588687 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.1■□□□□ 0.49
CCDC43-204ENST00000588687 CCNYQ8ND76 341 aa18.1■□□□□ 0.49
CCDC43-204ENST00000588687 STAMBPL1Q96FJ0 436 aa18.1■□□□□ 0.49
CCDC43-204ENST00000588687 RNF157Q96PX1 679 aa18.1■□□□□ 0.49
CCDC43-204ENST00000588687 RAB33BQ9H082 229 aa18.1■□□□□ 0.49
CCDC43-204ENST00000588687 POLHQ9Y253 713 aa18.1■□□□□ 0.49
CCDC43-204ENST00000588687 DNAJC16Q9Y2G8 782 aa18.1■□□□□ 0.49
CCDC43-204ENST00000588687 WDR37Q9Y2I8 494 aa18.1■□□□□ 0.49
CCDC43-204ENST00000588687 SPO11Q9Y5K1 396 aa18.1■□□□□ 0.49
CCDC43-204ENST00000588687 SHANK1Q9Y566 2161 aa18.09■□□□□ 0.49
CCDC43-204ENST00000588687 PDZK1P1A8MUH7 402 aa18.09■□□□□ 0.49
CCDC43-204ENST00000588687 ZNF487B1APH4 448 aa18.09■□□□□ 0.49
CCDC43-204ENST00000588687 AURKAO14965 403 aa18.09■□□□□ 0.49
CCDC43-204ENST00000588687 SPAG6O75602 509 aa18.09■□□□□ 0.49
CCDC43-204ENST00000588687 RECKO95980 971 aa18.09■□□□□ 0.49
CCDC43-204ENST00000588687 KRT7P08729 469 aa18.09■□□□□ 0.49
CCDC43-204ENST00000588687 NELFEP18615 380 aaKnown RBP18.09■□□□□ 0.49
CCDC43-204ENST00000588687 RPL10P27635 214 aaKnown RBP18.09■□□□□ 0.49
CCDC43-204ENST00000588687 DRG2P55039 364 aaKnown RBP18.09■□□□□ 0.49
CCDC43-204ENST00000588687 SLC9A4Q6AI14 798 aa18.09■□□□□ 0.49
CCDC43-204ENST00000588687 MAP7D3Q8IWC1 876 aa18.09■□□□□ 0.49
CCDC43-204ENST00000588687 TRIM48Q8IWZ4 208 aa18.09■□□□□ 0.49
CCDC43-204ENST00000588687 GPR150Q8NGU9 434 aa18.09■□□□□ 0.49
CCDC43-204ENST00000588687 CT55Q8WUE5 264 aa18.09■□□□□ 0.49
CCDC43-204ENST00000588687 ELMO2Q96JJ3 720 aa18.09■□□□□ 0.49
CCDC43-204ENST00000588687 SLC41A2Q96JW4 573 aa18.09■□□□□ 0.49
CCDC43-204ENST00000588687 VPS35Q96QK1 796 aa18.09■□□□□ 0.49
CCDC43-204ENST00000588687 RUFY1Q96T51 708 aa18.09■□□□□ 0.49
CCDC43-204ENST00000588687 PACSIN1Q9BY11 444 aa18.09■□□□□ 0.49
CCDC43-204ENST00000588687 LNPEPQ9UIQ6 1025 aa18.09■□□□□ 0.49
CCDC43-204ENST00000588687 MKRN2OSH3BPM6 223 aa18.08■□□□□ 0.48
CCDC43-204ENST00000588687 VEGFDO43915 354 aa18.08■□□□□ 0.48
CCDC43-204ENST00000588687 CREG1O75629 220 aa18.08■□□□□ 0.48
CCDC43-204ENST00000588687 RFPL1O75677 317 aa18.08■□□□□ 0.48
CCDC43-204ENST00000588687 RASSF9O75901 435 aa18.08■□□□□ 0.48
CCDC43-204ENST00000588687 SLC4A1P02730 911 aa18.08■□□□□ 0.48
CCDC43-204ENST00000588687 GYPCP04921 128 aa18.08■□□□□ 0.48
CCDC43-204ENST00000588687 AMD1P17707 334 aa18.08■□□□□ 0.48
CCDC43-204ENST00000588687 KDELR1P24390 212 aa18.08■□□□□ 0.48
CCDC43-204ENST00000588687 MLLT10P55197 1068 aa18.08■□□□□ 0.48
CCDC43-204ENST00000588687 ZBED6P86452 979 aa18.08■□□□□ 0.48
CCDC43-204ENST00000588687 DNASE1L3Q13609 305 aa18.08■□□□□ 0.48
CCDC43-204ENST00000588687 FAM92BQ6ZTR7 304 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms