RNA–Protein interactions for RNA: ENST00000587170.1

CXXC1-208, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-208ENST00000587170 PDPK2PQ6A1A2 396 aa13.9□□□□□ -0.18
CXXC1-208ENST00000587170 TIGD7Q6NT04 549 aaPredicted RBP13.9□□□□□ -0.18
CXXC1-208ENST00000587170 ABRAXAS1Q6UWZ7 409 aa13.9□□□□□ -0.18
CXXC1-208ENST00000587170 ZNF571Q7Z3V5 609 aaPredicted RBP13.9□□□□□ -0.18
CXXC1-208ENST00000587170 PPP1R3BQ86XI6 285 aa13.9□□□□□ -0.18
CXXC1-208ENST00000587170 LPCAT1Q8NF37 534 aa13.9□□□□□ -0.18
CXXC1-208ENST00000587170 THAP4Q8WY91 577 aa13.9□□□□□ -0.18
CXXC1-208ENST00000587170 EID2BQ96D98 161 aa13.9□□□□□ -0.18
CXXC1-208ENST00000587170 SLC41A2Q96JW4 573 aa13.9□□□□□ -0.18
CXXC1-208ENST00000587170 GPR87Q9BY21 358 aa13.9□□□□□ -0.18
CXXC1-208ENST00000587170 OR2AG1Q9H205 316 aa13.9□□□□□ -0.18
CXXC1-208ENST00000587170 TRIM39Q9HCM9 518 aa13.9□□□□□ -0.18
CXXC1-208ENST00000587170 SLC40A1Q9NP59 571 aa13.9□□□□□ -0.18
CXXC1-208ENST00000587170 KLC4Q9NSK0 619 aa13.9□□□□□ -0.18
CXXC1-208ENST00000587170 HAUS2Q9NVX0 235 aa13.9□□□□□ -0.18
CXXC1-208ENST00000587170 SLC23A2Q9UGH3 650 aa13.9□□□□□ -0.18
CXXC1-208ENST00000587170 DOCK10Q96BY6 2186 aa13.9□□□□□ -0.18
CXXC1-208ENST00000587170 SNRNP200O75643 2136 aaKnown RBP13.9□□□□□ -0.18
CXXC1-208ENST00000587170 LRRC53A6NM62 1247 aa13.89□□□□□ -0.19
CXXC1-208ENST00000587170 ANKRD66B4E2M5 251 aa13.89□□□□□ -0.19
CXXC1-208ENST00000587170 DDX3XO00571 662 aaKnown RBP eCLIP13.89□□□□□ -0.19
CXXC1-208ENST00000587170 KIF1CO43896 1103 aaKnown RBP13.89□□□□□ -0.19
CXXC1-208ENST00000587170 CEACAM4O75871 244 aa13.89□□□□□ -0.19
CXXC1-208ENST00000587170 RASSF9O75901 435 aa13.89□□□□□ -0.19
CXXC1-208ENST00000587170 DDAH2O95865 285 aa13.89□□□□□ -0.19
CXXC1-208ENST00000587170 MMP2P08253 660 aa13.89□□□□□ -0.19
CXXC1-208ENST00000587170 BRAFP15056 766 aa13.89□□□□□ -0.19
CXXC1-208ENST00000587170 CCNCP24863 283 aa13.89□□□□□ -0.19
CXXC1-208ENST00000587170 ARSEP51690 589 aa13.89□□□□□ -0.19
CXXC1-208ENST00000587170 ITKQ08881 620 aa13.89□□□□□ -0.19
CXXC1-208ENST00000587170 NIPAL4Q0D2K0 466 aa13.89□□□□□ -0.19
CXXC1-208ENST00000587170 GPR18Q14330 331 aa13.89□□□□□ -0.19
CXXC1-208ENST00000587170 PIGHQ14442 188 aaPredicted RBP13.89□□□□□ -0.19
CXXC1-208ENST00000587170 QPCTQ16769 361 aa13.89□□□□□ -0.19
CXXC1-208ENST00000587170 CPZQ66K79 652 aa13.89□□□□□ -0.19
CXXC1-208ENST00000587170 NCBP2-AS2Q69YL0 99 aa13.89□□□□□ -0.19
CXXC1-208ENST00000587170 ZNF517Q6ZMY9 492 aaPredicted RBP13.89□□□□□ -0.19
CXXC1-208ENST00000587170 ADGRG6Q86SQ4 1221 aa13.89□□□□□ -0.19
CXXC1-208ENST00000587170 ZNF547Q8IVP9 402 aa13.89□□□□□ -0.19
CXXC1-208ENST00000587170 CCHCR1Q8TD31 782 aa13.89□□□□□ -0.19
CXXC1-208ENST00000587170 RNF31Q96EP0 1072 aa13.89□□□□□ -0.19
CXXC1-208ENST00000587170 ZDHHC12Q96GR4 267 aa13.89□□□□□ -0.19
CXXC1-208ENST00000587170 ZSCAN5AQ9BUG6 496 aa13.89□□□□□ -0.19
CXXC1-208ENST00000587170 ISCUQ9H1K1 167 aa13.89□□□□□ -0.19
CXXC1-208ENST00000587170 OSGEPL1Q9H4B0 414 aa13.89□□□□□ -0.19
CXXC1-208ENST00000587170 HAUS4Q9H6D7 363 aa13.89□□□□□ -0.19
CXXC1-208ENST00000587170 AIPL1Q9NZN9 384 aa13.89□□□□□ -0.19
CXXC1-208ENST00000587170 MDC1Q14676 2089 aaKnown RBP13.88□□□□□ -0.19
CXXC1-208ENST00000587170 ENO4A6NNW6 628 aa13.88□□□□□ -0.19
CXXC1-208ENST00000587170 HLA-DQB2P05538 268 aa13.88□□□□□ -0.19
CXXC1-208ENST00000587170 ZNF7P17097 686 aaPredicted RBP13.88□□□□□ -0.19
CXXC1-208ENST00000587170 AMD1P17707 334 aa13.88□□□□□ -0.19
CXXC1-208ENST00000587170 IL10RAQ13651 578 aa13.88□□□□□ -0.19
CXXC1-208ENST00000587170 IFI16Q16666 785 aaKnown RBP13.88□□□□□ -0.19
CXXC1-208ENST00000587170 INSCQ1MX18 579 aa13.88□□□□□ -0.19
CXXC1-208ENST00000587170 NADK2Q4G0N4 442 aa13.88□□□□□ -0.19
CXXC1-208ENST00000587170 CACHD1Q5VU97 1274 aa13.88□□□□□ -0.19
CXXC1-208ENST00000587170 PWWP2BQ6NUJ5 590 aa13.88□□□□□ -0.19
CXXC1-208ENST00000587170 SYVN1Q86TM6 617 aa13.88□□□□□ -0.19
CXXC1-208ENST00000587170 BPHLQ86WA6 291 aaPredicted RBP13.88□□□□□ -0.19
CXXC1-208ENST00000587170 TRIM48Q8IWZ4 208 aa13.88□□□□□ -0.19
CXXC1-208ENST00000587170 UBXN4Q92575 508 aa13.88□□□□□ -0.19
CXXC1-208ENST00000587170 GLYATL1Q969I3 302 aa13.88□□□□□ -0.19
CXXC1-208ENST00000587170 SLC25A23Q9BV35 468 aa13.88□□□□□ -0.19
CXXC1-208ENST00000587170 RBM22Q9NW64 420 aaKnown RBP eCLIP13.88□□□□□ -0.19
CXXC1-208ENST00000587170 DTLQ9NZJ0 730 aa13.88□□□□□ -0.19
CXXC1-208ENST00000587170 PCDHGB7Q9Y5F8 929 aa13.88□□□□□ -0.19
CXXC1-208ENST00000587170 TACC2O95359 2948 aa13.87□□□□□ -0.19
CXXC1-208ENST00000587170 WIPF3A6NGB9 483 aa13.87□□□□□ -0.19
CXXC1-208ENST00000587170 KMOO15229 486 aa13.87□□□□□ -0.19
CXXC1-208ENST00000587170 VEGFDO43915 354 aa13.87□□□□□ -0.19
CXXC1-208ENST00000587170 SLC25A14O95258 325 aaPredicted RBP13.87□□□□□ -0.19
CXXC1-208ENST00000587170 CD48P09326 243 aa13.87□□□□□ -0.19
CXXC1-208ENST00000587170 PTPN4P29074 926 aa13.87□□□□□ -0.19
CXXC1-208ENST00000587170 MMRN1Q13201 1228 aa13.87□□□□□ -0.19
CXXC1-208ENST00000587170 TUBB3Q13509 450 aa13.87□□□□□ -0.19
CXXC1-208ENST00000587170 DPYSL3Q14195 570 aa13.87□□□□□ -0.19
CXXC1-208ENST00000587170 ASIC2Q16515 512 aa13.87□□□□□ -0.19
CXXC1-208ENST00000587170 CCDC183Q5T5S1 534 aa13.87□□□□□ -0.19
CXXC1-208ENST00000587170 CRTC3Q6UUV7 619 aa13.87□□□□□ -0.19
CXXC1-208ENST00000587170 C11orf96Q7Z7L8 435 aa13.87□□□□□ -0.19
CXXC1-208ENST00000587170 LRRTM4Q86VH4 590 aa13.87□□□□□ -0.19
CXXC1-208ENST00000587170 KMT5CQ86Y97 462 aa13.87□□□□□ -0.19
CXXC1-208ENST00000587170 HPS6Q86YV9 775 aa13.87□□□□□ -0.19
CXXC1-208ENST00000587170 TRAM1L1Q8N609 369 aa13.87□□□□□ -0.19
CXXC1-208ENST00000587170 GPR26Q8NDV2 337 aa13.87□□□□□ -0.19
CXXC1-208ENST00000587170 ADAMTS17Q8TE56 1095 aa13.87□□□□□ -0.19
CXXC1-208ENST00000587170 ELMO2Q96JJ3 720 aa13.87□□□□□ -0.19
CXXC1-208ENST00000587170 TRIB3Q96RU7 358 aa13.87□□□□□ -0.19
CXXC1-208ENST00000587170 RUFY1Q96T51 708 aa13.87□□□□□ -0.19
CXXC1-208ENST00000587170 MLPHQ9BV36 600 aaPredicted RBP13.87□□□□□ -0.19
CXXC1-208ENST00000587170 NUP85Q9BW27 656 aa13.87□□□□□ -0.19
CXXC1-208ENST00000587170 PDE7BQ9NP56 450 aa13.87□□□□□ -0.19
CXXC1-208ENST00000587170 ARFGAP3Q9NP61 516 aa13.87□□□□□ -0.19
CXXC1-208ENST00000587170 ZGRF1Q86YA3 2104 aa13.87□□□□□ -0.19
CXXC1-208ENST00000587170 CSMD2Q7Z408 3487 aa13.86□□□□□ -0.19
CXXC1-208ENST00000587170 DCHS2Q6V1P9 2916 aa13.86□□□□□ -0.19
CXXC1-208ENST00000587170 ADGRG4Q8IZF6 3080 aa13.86□□□□□ -0.19
CXXC1-208ENST00000587170 IGHV5-51A0A0C4DH38 117 aa13.86□□□□□ -0.19
CXXC1-208ENST00000587170 OR52A4PA6NMU1 304 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms