RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 PANK3Q9H999 370 aa2.77□□□□□ -1.97
VAPA-208ENST00000584796 PLEKHA5Q9HAU0 1116 aa2.77□□□□□ -1.97
VAPA-208ENST00000584796 SAYSD1Q9NPB0 183 aa2.77□□□□□ -1.97
VAPA-208ENST00000584796 MYOZ2Q9NPC6 264 aa2.77□□□□□ -1.97
VAPA-208ENST00000584796 MCM9Q9NXL9 1143 aa2.77□□□□□ -1.97
VAPA-208ENST00000584796 PNMA2Q9UL42 364 aa2.77□□□□□ -1.97
VAPA-208ENST00000584796 RRP7AQ9Y3A4 280 aaKnown RBP2.77□□□□□ -1.97
VAPA-208ENST00000584796 DOCK1Q14185 1865 aa2.77□□□□□ -1.97
VAPA-208ENST00000584796 SIPA1L1O43166 1804 aa2.77□□□□□ -1.97
VAPA-208ENST00000584796 LOC285556D6RIA3 1793 aa2.77□□□□□ -1.97
VAPA-208ENST00000584796 SMCHD1A6NHR9 2005 aa2.76□□□□□ -1.97
VAPA-208ENST00000584796 PRRC2BQ5JSZ5 2229 aaKnown RBP2.76□□□□□ -1.97
VAPA-208ENST00000584796 IGKV3D-15A0A087WSY6 115 aa2.76□□□□□ -1.97
VAPA-208ENST00000584796 IGKV3D-20A0A0C4DH25 116 aa2.76□□□□□ -1.97
VAPA-208ENST00000584796 C17orf113A0A1B0GUU1 675 aa2.76□□□□□ -1.97
VAPA-208ENST00000584796 SNAP23O00161 211 aa2.76□□□□□ -1.97
VAPA-208ENST00000584796 KLK8O60259 260 aa2.76□□□□□ -1.97
VAPA-208ENST00000584796 TK1P04183 234 aa2.76□□□□□ -1.97
VAPA-208ENST00000584796 IFIT2P09913 472 aaKnown RBP2.76□□□□□ -1.97
VAPA-208ENST00000584796 CD58P19256 250 aa2.76□□□□□ -1.97
VAPA-208ENST00000584796 IL15P40933 162 aaPredicted RBP2.76□□□□□ -1.97
VAPA-208ENST00000584796 FMO5P49326 533 aa2.76□□□□□ -1.97
VAPA-208ENST00000584796 NR1H2P55055 460 aa2.76□□□□□ -1.97
VAPA-208ENST00000584796 SP3Q02447 781 aa2.76□□□□□ -1.97
VAPA-208ENST00000584796 TEFQ10587 303 aa2.76□□□□□ -1.97
VAPA-208ENST00000584796 PPIGQ13427 754 aaKnown RBP eCLIP2.76□□□□□ -1.97
VAPA-208ENST00000584796 GRAPQ13588 217 aa2.76□□□□□ -1.97
VAPA-208ENST00000584796 CUL4BQ13620 913 aa2.76□□□□□ -1.97
VAPA-208ENST00000584796 BLMHQ13867 455 aa2.76□□□□□ -1.97
VAPA-208ENST00000584796 KRT24Q2M2I5 525 aa2.76□□□□□ -1.97
VAPA-208ENST00000584796 GRAMD1BQ3KR37 738 aa2.76□□□□□ -1.97
VAPA-208ENST00000584796 SLC10A5Q5PT55 438 aa2.76□□□□□ -1.97
VAPA-208ENST00000584796 FAM83BQ5T0W9 1011 aa2.76□□□□□ -1.97
VAPA-208ENST00000584796 C10orf62Q5T681 223 aaPredicted RBP2.76□□□□□ -1.97
VAPA-208ENST00000584796 JMJD6Q6NYC1 403 aaPredicted RBP2.76□□□□□ -1.97
VAPA-208ENST00000584796 ARHGAP11AQ6P4F7 1023 aa2.76□□□□□ -1.97
VAPA-208ENST00000584796 B3GNT6Q6ZMB0 384 aa2.76□□□□□ -1.97
VAPA-208ENST00000584796 KRBA2Q6ZNG9 492 aa2.76□□□□□ -1.97
VAPA-208ENST00000584796 TBC1D26Q86UD7 250 aa2.76□□□□□ -1.97
VAPA-208ENST00000584796 CERS5Q8N5B7 392 aa2.76□□□□□ -1.97
VAPA-208ENST00000584796 SLC24A4Q8NFF2 622 aa2.76□□□□□ -1.97
VAPA-208ENST00000584796 SH3KBP1Q96B97 665 aa2.76□□□□□ -1.97
VAPA-208ENST00000584796 ALG14Q96F25 216 aa2.76□□□□□ -1.97
VAPA-208ENST00000584796 ERO1AQ96HE7 468 aa2.76□□□□□ -1.97
VAPA-208ENST00000584796 ARPC5LQ9BPX5 153 aa2.76□□□□□ -1.97
VAPA-208ENST00000584796 TTYH1Q9H313 450 aaPredicted RBP2.76□□□□□ -1.97
VAPA-208ENST00000584796 CHODLQ9H9P2 273 aa2.76□□□□□ -1.97
VAPA-208ENST00000584796 TMEM30AQ9NV96 361 aa2.76□□□□□ -1.97
VAPA-208ENST00000584796 CISD1Q9NZ45 108 aaKnown RBP2.76□□□□□ -1.97
VAPA-208ENST00000584796 GRHPRQ9UBQ7 328 aa2.76□□□□□ -1.97
VAPA-208ENST00000584796 TINAGQ9UJW2 476 aa2.76□□□□□ -1.97
VAPA-208ENST00000584796 POU2F3Q9UKI9 436 aa2.76□□□□□ -1.97
VAPA-208ENST00000584796 RALYQ9UKM9 306 aaKnown RBP2.76□□□□□ -1.97
VAPA-208ENST00000584796 PCDHGB5Q9Y5G0 923 aa2.76□□□□□ -1.97
VAPA-208ENST00000584796 BAHCC1Q9P281 2608 aa2.76□□□□□ -1.97
VAPA-208ENST00000584796 VPS13AQ96RL7 3174 aa2.76□□□□□ -1.97
VAPA-208ENST00000584796 CACNA1BQ00975 2339 aa2.76□□□□□ -1.97
VAPA-208ENST00000584796 EPG5Q9HCE0 2579 aa2.76□□□□□ -1.97
VAPA-208ENST00000584796 ZNFX1Q9P2E3 1918 aaKnown RBP2.76□□□□□ -1.97
VAPA-208ENST00000584796 PLXNA3P51805 1871 aa2.75□□□□□ -1.97
VAPA-208ENST00000584796 MYO5AQ9Y4I1 1855 aaKnown RBP2.75□□□□□ -1.97
VAPA-208ENST00000584796 DMXL1Q9Y485 3027 aa2.75□□□□□ -1.97
VAPA-208ENST00000584796 PDS5AQ29RF7 1337 aaKnown RBP2.75□□□□□ -1.97
VAPA-208ENST00000584796 CHD6Q8TD26 2715 aa2.75□□□□□ -1.97
VAPA-208ENST00000584796 CLRN2A0PK11 232 aa2.75□□□□□ -1.97
VAPA-208ENST00000584796 ARHGAP10A1A4S6 786 aa2.75□□□□□ -1.97
VAPA-208ENST00000584796 STX16-NPEPL1H3BU86 382 aa2.75□□□□□ -1.97
VAPA-208ENST00000584796 STX16O14662 325 aa2.75□□□□□ -1.97
VAPA-208ENST00000584796 PRSS1P07477 247 aa2.75□□□□□ -1.97
VAPA-208ENST00000584796 PCNAP12004 261 aa2.75□□□□□ -1.97
VAPA-208ENST00000584796 ALDH4A1P30038 563 aa2.75□□□□□ -1.97
VAPA-208ENST00000584796 HOXC13P31276 330 aa2.75□□□□□ -1.97
VAPA-208ENST00000584796 PRKAR2BP31323 418 aa2.75□□□□□ -1.97
VAPA-208ENST00000584796 ADD2P35612 726 aa2.75□□□□□ -1.97
VAPA-208ENST00000584796 HTR3AP46098 478 aa2.75□□□□□ -1.97
VAPA-208ENST00000584796 HSD17B4P51659 736 aa2.75□□□□□ -1.97
VAPA-208ENST00000584796 SEC61BP60468 96 aaKnown RBP2.75□□□□□ -1.97
VAPA-208ENST00000584796 FKBP1BP68106 108 aa2.75□□□□□ -1.97
VAPA-208ENST00000584796 SETQ01105 290 aaPredicted RBP2.75□□□□□ -1.97
VAPA-208ENST00000584796 PRKCZQ05513 592 aa2.75□□□□□ -1.97
VAPA-208ENST00000584796 SREBF2Q12772 1141 aa2.75□□□□□ -1.97
VAPA-208ENST00000584796 RUNX2Q13950 521 aa2.75□□□□□ -1.97
VAPA-208ENST00000584796 NEDD9Q14511 834 aa2.75□□□□□ -1.97
VAPA-208ENST00000584796 TIGD6Q17RP2 521 aa2.75□□□□□ -1.97
VAPA-208ENST00000584796 CTXN3Q4LDR2 81 aa2.75□□□□□ -1.97
VAPA-208ENST00000584796 KCNT1Q5JUK3 1230 aa2.75□□□□□ -1.97
VAPA-208ENST00000584796 IRAK1BP1Q5VVH5 260 aa2.75□□□□□ -1.97
VAPA-208ENST00000584796 C17orf99Q6UX52 265 aa2.75□□□□□ -1.97
VAPA-208ENST00000584796 FOXRED2Q8IWF2 684 aa2.75□□□□□ -1.97
VAPA-208ENST00000584796 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.75□□□□□ -1.973e-9■■■■■ 57.3
VAPA-208ENST00000584796 CPXM2Q8N436 756 aa2.75□□□□□ -1.97
VAPA-208ENST00000584796 MAPK1IP1LQ8NDC0 245 aa2.75□□□□□ -1.97
VAPA-208ENST00000584796 AGBL3Q8NEM8 1001 aa2.75□□□□□ -1.97
VAPA-208ENST00000584796 BBS10Q8TAM1 723 aa2.75□□□□□ -1.97
VAPA-208ENST00000584796 MAGEC3Q8TD91 643 aa2.75□□□□□ -1.97
VAPA-208ENST00000584796 U2AF1L4Q8WU68 220 aaKnown RBP2.75□□□□□ -1.97
VAPA-208ENST00000584796 SLC20A1Q8WUM9 679 aa2.75□□□□□ -1.97
VAPA-208ENST00000584796 LGALS12Q96DT0 336 aa2.75□□□□□ -1.97
VAPA-208ENST00000584796 C17orf77Q96MU5 243 aa2.75□□□□□ -1.97
VAPA-208ENST00000584796 TWNKQ96RR1 684 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms