RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-210	ENST00000578733	ARRB1	P49407	418 aa	Predicted RBP	11.15	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	ATXN3	P54252	364 aa	Predicted RBP	11.15	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	NXPH1	P58417	271 aa		11.15	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	GSTM4	Q03013	218 aa		11.15	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	PPARD	Q03181	441 aa		11.15	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	TMEM115	Q12893	351 aa	Predicted RBP	11.15	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	TYSND1	Q2T9J0	566 aa		11.15	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	TRIM61	Q5EBN2	209 aa		11.15	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	SLC23A3	Q6PIS1	610 aa		11.15	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	PACS1	Q6VY07	963 aa		11.15	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	TAOK1	Q7L7X3	1001 aa		11.15	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	GALNT7	Q86SF2	657 aa		11.15	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	GALNT13	Q8IUC8	556 aa		11.15	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	CILP2	Q8IUL8	1156 aa		11.15	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	CNTN4	Q8IWV2	1026 aa		11.15	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	CTAGE3P	Q8IX95	158 aa		11.15	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	AEN	Q8WTP8	325 aa	Known RBP	11.15	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	UBLCP1	Q8WVY7	318 aa	Predicted RBP	11.15	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	CAVIN3	Q969G5	261 aa		11.15	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	WDR83	Q9BRX9	315 aa	Known RBP	11.15	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	TRIM56	Q9BRZ2	755 aa	Known RBP	11.15	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	TXLNGY	Q9BZA5	131 aa		11.15	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	SLC13A1	Q9BZW2	595 aa		11.15	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	OR2AG1	Q9H205	316 aa		11.15	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	ERVMER34-1	Q9H9K5	563 aa		11.15	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	GPR27	Q9NS67	375 aa		11.15	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	MOCS1	Q9NZB8	636 aa		11.15	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	GNPTG	Q9UJJ9	305 aa		11.15	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	CNOT6	Q9ULM6	557 aa	Known RBP	11.15	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	CORO1C	Q9ULV4	474 aa	Predicted RBP	11.15	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	PCDHB1	Q9Y5F3	818 aa		11.15	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	COMMD10	Q9Y6G5	202 aa		11.15	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	KNL1	Q8NG31	2342 aa		11.14	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	11.14	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733		A0A1B0GVT2	93 aa		11.14	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	PRMT5	O14744	637 aa	Predicted RBP	11.14	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	RIPK2	O43353	540 aa		11.14	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	NUAK1	O60285	661 aa		11.14	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	KCNJ13	O60928	360 aa		11.14	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	FTH1	P02794	183 aa		11.14	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	IVL	P07476	585 aa		11.14	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	FAM153B	P0C7A2	387 aa		11.14	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	CTSE	P14091	401 aa		11.14	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	ATP1B2	P14415	290 aa	Predicted RBP	11.14	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	ARNT	P27540	789 aa		11.14	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	SLC1A2	P43004	574 aa		11.14	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	LEPR	P48357	1165 aa	Known RBP	11.14	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	CD151	P48509	253 aa		11.14	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	CSNK1E	P49674	416 aa	Known RBP	11.14	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	GPX6	P59796	221 aa		11.14	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	SRP54	P61011	504 aa	Known RBP	11.14	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	HNRNPK	P61978	463 aa	Known RBP eCLIP	11.14	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	DBN1	Q16643	649 aa		11.14	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	FAM153C	Q494X1	144 aa		11.14	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	LRRTM4	Q86VH4	590 aa		11.14	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	TRAPPC5	Q8IUR0	188 aa		11.14	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	SLC22A18AS	Q8N1D0	253 aa		11.14	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	PELI3	Q8N2H9	469 aa		11.14	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	SUMF1	Q8NBK3	374 aa		11.14	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	C2CD4A	Q8NCU7	369 aa	Predicted RBP	11.14	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	FBF1	Q8TES7	1133 aa		11.14	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	HNRNPLL	Q8WVV9	542 aa	Known RBP	11.14	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	PANX3	Q96QZ0	392 aa		11.14	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	CPNE1	Q99829	537 aa		11.14	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	RTKN	Q9BST9	563 aa		11.14	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	LGR4	Q9BXB1	951 aa		11.14	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	FUT8	Q9BYC5	575 aa		11.14	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	ACSS3	Q9H6R3	686 aa		11.14	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	CARS2	Q9HA77	564 aa	Known RBP	11.14	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	CYP4F12	Q9HCS2	524 aa		11.14	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	TMEM74B	Q9NUR3	256 aa		11.14	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	IL1RAPL1	Q9NZN1	696 aa		11.14	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	ATXN10	Q9UBB4	475 aa		11.14	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	FBXO5	Q9UKT4	447 aa		11.14	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	GPR34	Q9UPC5	381 aa		11.14	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	SLC17A4	Q9Y2C5	497 aa		11.14	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	11.14	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	ACACB	O00763	2458 aa		11.14	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	IGLV3-16	A0A075B6K0	115 aa		11.13	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	EXOC1L	A0A1B0GW35	172 aa		11.13	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	PRSS38	A1L453	326 aa		11.13	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	TMEM202	A6NGA9	273 aa		11.13	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	FAM159B	A6NKW6	160 aa		11.13	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733		E5RI56	91 aa		11.13	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	KMO	O15229	486 aa		11.13	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	GPR39	O43194	453 aa		11.13	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	GRID2	O43424	1007 aa		11.13	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	ESR1	P03372	595 aa		11.13	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	WNT1	P04628	370 aa		11.13	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	INHBA	P08476	426 aa		11.13	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	PRSS56	P0CW18	603 aa		11.13	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	RPS3	P23396	243 aa	Known RBP eCLIP	11.13	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	CTSK	P43235	329 aa		11.13	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	GNPDA1	P46926	289 aa		11.13	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	CDKN1C	P49918	316 aa	Predicted RBP	11.13	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	CSE1L	P55060	971 aa	Known RBP	11.13	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	ADAR	P55265	1226 aa	Known RBP	11.13	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	EIF3B	P55884	814 aa	Known RBP	11.13	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	GRIK2	Q13002	908 aa		11.13	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	CTBP1	Q13363	440 aa		11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms