RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 NLE1Q9NVX2 485 aaPredicted RBP7.82□□□□□ -1.16
CCDC40-215ENST00000576033 NFKBIL1Q9UBC1 381 aaPredicted RBP7.82□□□□□ -1.16
CCDC40-215ENST00000576033 RABGEF1Q9UJ41 708 aa7.82□□□□□ -1.16
CCDC40-215ENST00000576033 TPX2Q9ULW0 747 aaKnown RBP7.82□□□□□ -1.16
CCDC40-215ENST00000576033 PKP3Q9Y446 797 aa7.82□□□□□ -1.16
CCDC40-215ENST00000576033 GPSM3Q9Y4H4 160 aa7.82□□□□□ -1.16
CCDC40-215ENST00000576033 PRSS21Q9Y6M0 314 aa7.82□□□□□ -1.16
CCDC40-215ENST00000576033 GOLGA4Q13439 2230 aaKnown RBP7.82□□□□□ -1.16
CCDC40-215ENST00000576033 PIKFYVEQ9Y2I7 2098 aa7.82□□□□□ -1.16
CCDC40-215ENST00000576033 TRBV23OR9-2A0A075B6M9 112 aa7.81□□□□□ -1.16
CCDC40-215ENST00000576033 MED19A0JLT2 244 aaPredicted RBP7.81□□□□□ -1.16
CCDC40-215ENST00000576033 NDC80O14777 642 aa7.81□□□□□ -1.16
CCDC40-215ENST00000576033 YY2O15391 372 aa7.81□□□□□ -1.16
CCDC40-215ENST00000576033 PCDHGA12O60330 932 aa7.81□□□□□ -1.16
CCDC40-215ENST00000576033 OR1I1O60431 355 aa7.81□□□□□ -1.16
CCDC40-215ENST00000576033 SLC25A14O95258 325 aaPredicted RBP7.81□□□□□ -1.16
CCDC40-215ENST00000576033 GOT2P00505 430 aaKnown RBP7.81□□□□□ -1.16
CCDC40-215ENST00000576033 NFKBIAP25963 317 aa7.81□□□□□ -1.16
CCDC40-215ENST00000576033 HTR1BP28222 390 aa7.81□□□□□ -1.16
CCDC40-215ENST00000576033 FOXN2P32314 431 aa7.81□□□□□ -1.16
CCDC40-215ENST00000576033 ACTN2P35609 894 aa7.81□□□□□ -1.16
CCDC40-215ENST00000576033 ADCY8P40145 1251 aa7.81□□□□□ -1.16
CCDC40-215ENST00000576033 MAGEA3P43357 314 aa7.81□□□□□ -1.16
CCDC40-215ENST00000576033 MAGEA6P43360 314 aa7.81□□□□□ -1.16
CCDC40-215ENST00000576033 ARRB1P49407 418 aaPredicted RBP7.81□□□□□ -1.16
CCDC40-215ENST00000576033 ITGA8P53708 1063 aa7.81□□□□□ -1.16
CCDC40-215ENST00000576033 MAZP56270 477 aaKnown RBP7.81□□□□□ -1.16
CCDC40-215ENST00000576033 CBX1P83916 185 aa7.81□□□□□ -1.16
CCDC40-215ENST00000576033 ARHGAP8P85298 464 aa7.81□□□□□ -1.16
CCDC40-215ENST00000576033 CTBSQ01459 385 aa7.81□□□□□ -1.16
CCDC40-215ENST00000576033 GABPB1Q06547 395 aaPredicted RBP7.81□□□□□ -1.16
CCDC40-215ENST00000576033 DHX9Q08211 1270 aaKnown RBP7.81□□□□□ -1.16
CCDC40-215ENST00000576033 NFATC2Q13469 925 aa7.81□□□□□ -1.16
CCDC40-215ENST00000576033 SLMAPQ14BN4 828 aa7.81□□□□□ -1.16
CCDC40-215ENST00000576033 DBN1Q16643 649 aa7.81□□□□□ -1.16
CCDC40-215ENST00000576033 PROX2Q3B8N5 592 aa7.81□□□□□ -1.16
CCDC40-215ENST00000576033 PYCR3Q53H96 274 aa7.81□□□□□ -1.16
CCDC40-215ENST00000576033 ZRANB3Q5FWF4 1079 aa7.81□□□□□ -1.16
CCDC40-215ENST00000576033 PERM1Q5SV97 790 aa7.81□□□□□ -1.16
CCDC40-215ENST00000576033 TSTD2Q5T7W7 516 aa7.81□□□□□ -1.16
CCDC40-215ENST00000576033 GUSBP11Q6P575 273 aa7.81□□□□□ -1.16
CCDC40-215ENST00000576033 LRRC8BQ6P9F7 803 aa7.81□□□□□ -1.16
CCDC40-215ENST00000576033 DBX2Q6ZNG2 339 aa7.81□□□□□ -1.16
CCDC40-215ENST00000576033 FAM83HQ6ZRV2 1179 aaPredicted RBP7.81□□□□□ -1.16
CCDC40-215ENST00000576033 CHST15Q7LFX5 561 aaPredicted RBP7.81□□□□□ -1.16
CCDC40-215ENST00000576033 SLCO6A1Q86UG4 719 aa7.81□□□□□ -1.16
CCDC40-215ENST00000576033 ZNF761Q86XN6 746 aaPredicted RBP7.81□□□□□ -1.16
CCDC40-215ENST00000576033 PHYKPLQ8IUZ5 450 aa7.81□□□□□ -1.16
CCDC40-215ENST00000576033 SLC35F3Q8IY50 421 aa7.81□□□□□ -1.16
CCDC40-215ENST00000576033 GDAP1Q8TB36 358 aa7.81□□□□□ -1.16
CCDC40-215ENST00000576033 LKAAEAR1Q8TD35 194 aa7.81□□□□□ -1.16
CCDC40-215ENST00000576033 BTN2A2Q8WVV5 523 aa7.81□□□□□ -1.16
CCDC40-215ENST00000576033 HDAC10Q969S8 669 aa7.81□□□□□ -1.16
CCDC40-215ENST00000576033 SKA1Q96BD8 255 aa7.81□□□□□ -1.16
CCDC40-215ENST00000576033 CDKN2AIPNLQ96HQ2 116 aa7.81□□□□□ -1.16
CCDC40-215ENST00000576033 CNDP2Q96KP4 475 aaKnown RBP7.81□□□□□ -1.16
CCDC40-215ENST00000576033 PLEKHG4BQ96PX9 1271 aa7.81□□□□□ -1.16
CCDC40-215ENST00000576033 OR2M4Q96R27 311 aa7.81□□□□□ -1.16
CCDC40-215ENST00000576033 NRTNQ99748 197 aa7.81□□□□□ -1.16
CCDC40-215ENST00000576033 ZSCAN5AQ9BUG6 496 aa7.81□□□□□ -1.16
CCDC40-215ENST00000576033 TSPYL1Q9H0U9 437 aa7.81□□□□□ -1.16
CCDC40-215ENST00000576033 TRABDQ9H4I3 376 aa7.81□□□□□ -1.16
CCDC40-215ENST00000576033 ASB8Q9H765 288 aa7.81□□□□□ -1.16
CCDC40-215ENST00000576033 SPATS2LQ9NUQ6 558 aaKnown RBP7.81□□□□□ -1.16
CCDC40-215ENST00000576033 HACD3Q9P035 362 aa7.81□□□□□ -1.16
CCDC40-215ENST00000576033 MTRF1LQ9UGC7 380 aaKnown RBP7.81□□□□□ -1.16
CCDC40-215ENST00000576033 DNAJC16Q9Y2G8 782 aa7.81□□□□□ -1.16
CCDC40-215ENST00000576033 RP1P56715 2156 aa7.81□□□□□ -1.16
CCDC40-215ENST00000576033 CHD8Q9HCK8 2581 aa7.8□□□□□ -1.16
CCDC40-215ENST00000576033 HEATR9A2RTY3 570 aa7.8□□□□□ -1.16
CCDC40-215ENST00000576033 C2orf81A6NN90 581 aa7.8□□□□□ -1.16
CCDC40-215ENST00000576033 ERI2A8K979 691 aaKnown RBP7.8□□□□□ -1.16
CCDC40-215ENST00000576033 H3BM21 787 aa7.8□□□□□ -1.16
CCDC40-215ENST00000576033 AGRPO00253 132 aa7.8□□□□□ -1.16
CCDC40-215ENST00000576033 FLRT2O43155 660 aa7.8□□□□□ -1.16
CCDC40-215ENST00000576033 PSMD3O43242 534 aa7.8□□□□□ -1.16
CCDC40-215ENST00000576033 OPA1O60313 960 aa7.8□□□□□ -1.16
CCDC40-215ENST00000576033 NOBOXO60393 691 aa7.8□□□□□ -1.16
CCDC40-215ENST00000576033 MAGEC1O60732 1142 aa7.8□□□□□ -1.16
CCDC40-215ENST00000576033 SNX2O60749 519 aa7.8□□□□□ -1.16
CCDC40-215ENST00000576033 PIAS1O75925 651 aa7.8□□□□□ -1.16
CCDC40-215ENST00000576033 CRTAMO95727 393 aa7.8□□□□□ -1.16
CCDC40-215ENST00000576033 TNFP01375 233 aa7.8□□□□□ -1.16
CCDC40-215ENST00000576033 HOXC4P09017 264 aaPredicted RBP7.8□□□□□ -1.16
CCDC40-215ENST00000576033 FTH1P19P0C7X4 201 aa7.8□□□□□ -1.16
CCDC40-215ENST00000576033 ZNF883P0CG24 379 aa7.8□□□□□ -1.16
CCDC40-215ENST00000576033 ITGB6P18564 788 aa7.8□□□□□ -1.16
CCDC40-215ENST00000576033 TEAD1P28347 426 aa7.8□□□□□ -1.16
CCDC40-215ENST00000576033 AKT1P31749 480 aa7.8□□□□□ -1.16
CCDC40-215ENST00000576033 GRK6P43250 576 aa7.8□□□□□ -1.16
CCDC40-215ENST00000576033 ABCG1P45844 678 aa7.8□□□□□ -1.16
CCDC40-215ENST00000576033 ACADVLP49748 655 aa7.8□□□□□ -1.16
CCDC40-215ENST00000576033 PGGT1BP53609 377 aa7.8□□□□□ -1.16
CCDC40-215ENST00000576033 PMS2P54278 862 aa7.8□□□□□ -1.16
CCDC40-215ENST00000576033 HNRNPKP61978 463 aaKnown RBP eCLIP7.8□□□□□ -1.16
CCDC40-215ENST00000576033 SIM1P81133 766 aaPredicted RBP7.8□□□□□ -1.16
CCDC40-215ENST00000576033 ZNF844Q08AG5 666 aa7.8□□□□□ -1.16
CCDC40-215ENST00000576033 CALCOCO2Q13137 446 aa7.8□□□□□ -1.16
CCDC40-215ENST00000576033 PTK2BQ14289 1009 aa7.8□□□□□ -1.16
CCDC40-215ENST00000576033 MORF4L2Q15014 288 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms