RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 IZUMO3Q5VZ72 239 aa8.85□□□□□ -0.99
SMG6-218ENST00000575454 CPZQ66K79 652 aa8.85□□□□□ -0.99
SMG6-218ENST00000575454 PDPK2PQ6A1A2 396 aa8.85□□□□□ -0.99
SMG6-218ENST00000575454 ALG1LQ6GMV1 187 aa8.85□□□□□ -0.99
SMG6-218ENST00000575454 TIGD7Q6NT04 549 aaPredicted RBP8.85□□□□□ -0.99
SMG6-218ENST00000575454 PWWP2BQ6NUJ5 590 aa8.85□□□□□ -0.99
SMG6-218ENST00000575454 IRGCQ6NXR0 463 aa8.85□□□□□ -0.99
SMG6-218ENST00000575454 ABRAXAS1Q6UWZ7 409 aa8.85□□□□□ -0.99
SMG6-218ENST00000575454 FAM92BQ6ZTR7 304 aa8.85□□□□□ -0.99
SMG6-218ENST00000575454 MED25Q71SY5 747 aa8.85□□□□□ -0.99
SMG6-218ENST00000575454 POLNQ7Z5Q5 900 aa8.85□□□□□ -0.99
SMG6-218ENST00000575454 IQCKQ8N0W5 287 aa8.85□□□□□ -0.99
SMG6-218ENST00000575454 ARFGAP1Q8N6T3 406 aa8.85□□□□□ -0.99
SMG6-218ENST00000575454 TMEM102Q8N9M5 508 aaPredicted RBP8.85□□□□□ -0.99
SMG6-218ENST00000575454 ENOX1Q8TC92 643 aaKnown RBP8.85□□□□□ -0.99
SMG6-218ENST00000575454 CXorf40BQ96DE9 158 aa8.85□□□□□ -0.99
SMG6-218ENST00000575454 CSPG4P5Q96PW8 444 aa8.85□□□□□ -0.99
SMG6-218ENST00000575454 PEBP4Q96S96 227 aa8.85□□□□□ -0.99
SMG6-218ENST00000575454 CD180Q99467 661 aa8.85□□□□□ -0.99
SMG6-218ENST00000575454 TIMM29Q9BSF4 260 aa8.85□□□□□ -0.99
SMG6-218ENST00000575454 ZSCAN5AQ9BUG6 496 aa8.85□□□□□ -0.99
SMG6-218ENST00000575454 TDRD1Q9BXT4 1180 aaKnown RBP8.85□□□□□ -0.99
SMG6-218ENST00000575454 OR2AG1Q9H205 316 aa8.85□□□□□ -0.99
SMG6-218ENST00000575454 MRPL47Q9HD33 250 aaKnown RBP8.85□□□□□ -0.99
SMG6-218ENST00000575454 C5AR2Q9P296 337 aa8.85□□□□□ -0.99
SMG6-218ENST00000575454 ZNF624Q9P2J8 865 aaPredicted RBP8.85□□□□□ -0.99
SMG6-218ENST00000575454 ATXN10Q9UBB4 475 aa8.85□□□□□ -0.99
SMG6-218ENST00000575454 SIK3Q9Y2K2 1263 aa8.85□□□□□ -0.99
SMG6-218ENST00000575454 SCINQ9Y6U3 715 aa8.85□□□□□ -0.99
SMG6-218ENST00000575454 A0A0U1RQS6 177 aa8.84□□□□□ -0.99
SMG6-218ENST00000575454 FADS2P1A8MWK0 482 aa8.84□□□□□ -0.99
SMG6-218ENST00000575454 CBX6O95503 412 aa8.84□□□□□ -0.99
SMG6-218ENST00000575454 JCHAINP01591 159 aa8.84□□□□□ -0.99
SMG6-218ENST00000575454 RAB40ALP0C0E4 278 aa8.84□□□□□ -0.99
SMG6-218ENST00000575454 ZNF7P17097 686 aaPredicted RBP8.84□□□□□ -0.99
SMG6-218ENST00000575454 AMPD1P23109 780 aa8.84□□□□□ -0.99
SMG6-218ENST00000575454 COL8A1P27658 744 aa8.84□□□□□ -0.99
SMG6-218ENST00000575454 HALP42357 657 aa8.84□□□□□ -0.99
SMG6-218ENST00000575454 ZNF165P49910 485 aa8.84□□□□□ -0.99
SMG6-218ENST00000575454 TUBB4BP68371 445 aa8.84□□□□□ -0.99
SMG6-218ENST00000575454 HSD11B2P80365 405 aa8.84□□□□□ -0.99
SMG6-218ENST00000575454 TUBB2AQ13885 445 aa8.84□□□□□ -0.99
SMG6-218ENST00000575454 NAA30Q147X3 362 aaPredicted RBP8.84□□□□□ -0.99
SMG6-218ENST00000575454 TDRD12Q587J7 1177 aaKnown RBP8.84□□□□□ -0.99
SMG6-218ENST00000575454 TMTC4Q5T4D3 741 aa8.84□□□□□ -0.99
SMG6-218ENST00000575454 SLC6A19Q695T7 634 aa8.84□□□□□ -0.99
SMG6-218ENST00000575454 CYP4V2Q6ZWL3 525 aaPredicted RBP8.84□□□□□ -0.99
SMG6-218ENST00000575454 LRRTM4Q86VH4 590 aa8.84□□□□□ -0.99
SMG6-218ENST00000575454 CARFQ8N187 725 aa8.84□□□□□ -0.99
SMG6-218ENST00000575454 GLIS1Q8NBF1 620 aa8.84□□□□□ -0.99
SMG6-218ENST00000575454 LPCAT1Q8NF37 534 aa8.84□□□□□ -0.99
SMG6-218ENST00000575454 RSC1A1Q92681 617 aa8.84□□□□□ -0.99
SMG6-218ENST00000575454 MR1Q95460 341 aa8.84□□□□□ -0.99
SMG6-218ENST00000575454 FATE1Q969F0 183 aa8.84□□□□□ -0.99
SMG6-218ENST00000575454 TRIM11Q96F44 468 aa8.84□□□□□ -0.99
SMG6-218ENST00000575454 ZNF514Q96K75 400 aaPredicted RBP8.84□□□□□ -0.99
SMG6-218ENST00000575454 LRFN5Q96NI6 719 aa8.84□□□□□ -0.99
SMG6-218ENST00000575454 WDR24Q96S15 920 aa8.84□□□□□ -0.99
SMG6-218ENST00000575454 MLPHQ9BV36 600 aaPredicted RBP8.84□□□□□ -0.99
SMG6-218ENST00000575454 TUBB2BQ9BVA1 445 aa8.84□□□□□ -0.99
SMG6-218ENST00000575454 ADGRE3Q9BY15 652 aa8.84□□□□□ -0.99
SMG6-218ENST00000575454 XPO4Q9C0E2 1151 aaKnown RBP8.84□□□□□ -0.99
SMG6-218ENST00000575454 CLSTN2Q9H4D0 955 aa8.84□□□□□ -0.99
SMG6-218ENST00000575454 RUBCNLQ9H714 662 aa8.84□□□□□ -0.99
SMG6-218ENST00000575454 PCDH9Q9HC56 1237 aa8.84□□□□□ -0.99
SMG6-218ENST00000575454 FGF21Q9NSA1 209 aa8.84□□□□□ -0.99
SMG6-218ENST00000575454 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.84□□□□□ -0.99
SMG6-218ENST00000575454 ETNK2Q9NVF9 386 aa8.84□□□□□ -0.99
SMG6-218ENST00000575454 GPR83Q9NYM4 423 aa8.84□□□□□ -0.99
SMG6-218ENST00000575454 SCHIP1Q9P0W5 487 aaPredicted RBP8.84□□□□□ -0.99
SMG6-218ENST00000575454 ERRFI1Q9UJM3 462 aaPredicted RBP8.84□□□□□ -0.99
SMG6-218ENST00000575454 SNX7Q9UNH6 387 aa8.84□□□□□ -0.99
SMG6-218ENST00000575454 SRPK3Q9UPE1 567 aa8.84□□□□□ -0.99
SMG6-218ENST00000575454 CHKBQ9Y259 395 aa8.84□□□□□ -0.99
SMG6-218ENST00000575454 ADGRG1Q9Y653 693 aa8.84□□□□□ -0.99
SMG6-218ENST00000575454 CACNA1DQ01668 2161 aa8.83□□□□□ -1
SMG6-218ENST00000575454 ZFC3H1O60293 1989 aaKnown RBP8.83□□□□□ -1
SMG6-218ENST00000575454 TMCO5BA8MYB1 307 aa8.83□□□□□ -1
SMG6-218ENST00000575454 ANKRD66B4E2M5 251 aa8.83□□□□□ -1
SMG6-218ENST00000575454 CHUKO15111 745 aa8.83□□□□□ -1
SMG6-218ENST00000575454 MATN3O15232 486 aa8.83□□□□□ -1
SMG6-218ENST00000575454 HNRNPRO43390 633 aaKnown RBP8.83□□□□□ -1
SMG6-218ENST00000575454 SCRG1O75711 98 aa8.83□□□□□ -1
SMG6-218ENST00000575454 TMEM63AO94886 807 aa8.83□□□□□ -1
SMG6-218ENST00000575454 TIAF1O95411 115 aa8.83□□□□□ -1
SMG6-218ENST00000575454 PRLP01236 227 aa8.83□□□□□ -1
SMG6-218ENST00000575454 IGHEP01854 428 aa8.83□□□□□ -1
SMG6-218ENST00000575454 ALPPP05187 535 aa8.83□□□□□ -1
SMG6-218ENST00000575454 MYBL1P10243 752 aa8.83□□□□□ -1
SMG6-218ENST00000575454 FOLR1P15328 257 aa8.83□□□□□ -1
SMG6-218ENST00000575454 VAV2P52735 878 aa8.83□□□□□ -1
SMG6-218ENST00000575454 DCDC1P59894 354 aa8.83□□□□□ -1
SMG6-218ENST00000575454 RPS18P62269 152 aaKnown RBP8.83□□□□□ -1
SMG6-218ENST00000575454 CHAF1BQ13112 559 aa8.83□□□□□ -1
SMG6-218ENST00000575454 IL10RAQ13651 578 aa8.83□□□□□ -1
SMG6-218ENST00000575454 GPR18Q14330 331 aa8.83□□□□□ -1
SMG6-218ENST00000575454 NR6A1Q15406 480 aa8.83□□□□□ -1
SMG6-218ENST00000575454 SEPT7Q16181 437 aaKnown RBP8.83□□□□□ -1
SMG6-218ENST00000575454 CCDC122Q5T0U0 273 aa8.83□□□□□ -1
SMG6-218ENST00000575454 CDKAL1Q5VV42 579 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms