RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 IDUAP35475 653 aa8.46□□□□□ -1.05
RPAIN-215ENST00000575112 ATP5C1P36542 298 aaKnown RBP8.46□□□□□ -1.05
RPAIN-215ENST00000575112 SLC11A2P49281 568 aa8.46□□□□□ -1.05
RPAIN-215ENST00000575112 DNASE1L3Q13609 305 aa8.46□□□□□ -1.05
RPAIN-215ENST00000575112 GRB7Q14451 532 aa8.46□□□□□ -1.05
RPAIN-215ENST00000575112 TXNDC8Q6A555 127 aa8.46□□□□□ -1.05
RPAIN-215ENST00000575112 TMEM214Q6NUQ4 689 aaKnown RBP8.46□□□□□ -1.05
RPAIN-215ENST00000575112 ARL14EPQ8N8R7 260 aaPredicted RBP8.46□□□□□ -1.05
RPAIN-215ENST00000575112 RTL3Q8N8U3 475 aaKnown RBP8.46□□□□□ -1.05
RPAIN-215ENST00000575112 OR4L1Q8NH43 312 aa8.46□□□□□ -1.05
RPAIN-215ENST00000575112 STYXQ8WUJ0 223 aa8.46□□□□□ -1.05
RPAIN-215ENST00000575112 IRGQQ8WZA9 623 aa8.46□□□□□ -1.05
RPAIN-215ENST00000575112 TSPAN17Q96FV3 270 aa8.46□□□□□ -1.05
RPAIN-215ENST00000575112 SGIP1Q9BQI5 828 aa8.46□□□□□ -1.05
RPAIN-215ENST00000575112 RTP3Q9BQQ7 232 aa8.46□□□□□ -1.05
RPAIN-215ENST00000575112 C17orf80Q9BSJ5 609 aa8.46□□□□□ -1.05
RPAIN-215ENST00000575112 MCMBPQ9BTE3 642 aa8.46□□□□□ -1.05
RPAIN-215ENST00000575112 EFHD1Q9BUP0 239 aa8.46□□□□□ -1.05
RPAIN-215ENST00000575112 HERC2P3Q9BVR0 1158 aa8.46□□□□□ -1.05
RPAIN-215ENST00000575112 ING2Q9H160 280 aa8.46□□□□□ -1.05
RPAIN-215ENST00000575112 TYW5A2RUC4 315 aaKnown RBP8.46□□□□□ -1.06
RPAIN-215ENST00000575112 TRPC5OSA6NMA1 111 aa8.46□□□□□ -1.06
RPAIN-215ENST00000575112 NBNO60934 754 aa8.46□□□□□ -1.06
RPAIN-215ENST00000575112 TCF3P15923 654 aa8.46□□□□□ -1.06
RPAIN-215ENST00000575112 IL7RP16871 459 aa8.46□□□□□ -1.06
RPAIN-215ENST00000575112 CTGFP29279 349 aa8.46□□□□□ -1.06
RPAIN-215ENST00000575112 CORO1AP31146 461 aaKnown RBP8.46□□□□□ -1.06
RPAIN-215ENST00000575112 TGFBR1P36897 503 aa8.46□□□□□ -1.06
RPAIN-215ENST00000575112 BCAP31P51572 246 aa8.46□□□□□ -1.06
RPAIN-215ENST00000575112 DGKQP52824 942 aa8.46□□□□□ -1.06
RPAIN-215ENST00000575112 IFITM3Q01628 133 aa8.46□□□□□ -1.06
RPAIN-215ENST00000575112 STX5Q13190 355 aa8.46□□□□□ -1.06
RPAIN-215ENST00000575112 GTF2H3Q13889 308 aa8.46□□□□□ -1.06
RPAIN-215ENST00000575112 NR1D2Q14995 579 aa8.46□□□□□ -1.06
RPAIN-215ENST00000575112 TMEM53Q6P2H8 277 aa8.46□□□□□ -1.06
RPAIN-215ENST00000575112 ALKAL1Q6UXT8 129 aa8.46□□□□□ -1.06
RPAIN-215ENST00000575112 APBB2Q92870 758 aa8.46□□□□□ -1.06
RPAIN-215ENST00000575112 LINGO1Q96FE5 620 aa8.46□□□□□ -1.06
RPAIN-215ENST00000575112 DEFB118Q96PH6 123 aa8.46□□□□□ -1.06
RPAIN-215ENST00000575112 MRPL57Q9BQC6 102 aaKnown RBP8.46□□□□□ -1.06
RPAIN-215ENST00000575112 CORO1BQ9BR76 489 aa8.46□□□□□ -1.06
RPAIN-215ENST00000575112 ALOXE3Q9BYJ1 711 aa8.46□□□□□ -1.06
RPAIN-215ENST00000575112 BCAP29Q9UHQ4 241 aa8.46□□□□□ -1.06
RPAIN-215ENST00000575112 MOSPD1Q9UJG1 213 aa8.46□□□□□ -1.06
RPAIN-215ENST00000575112 UTS2RQ9UKP6 389 aa8.46□□□□□ -1.06
RPAIN-215ENST00000575112 RANBP2P49792 3224 aaKnown RBP8.46□□□□□ -1.06
RPAIN-215ENST00000575112 A0A0J9YYE9 177 aa8.46□□□□□ -1.06
RPAIN-215ENST00000575112 PTGES3LE9PB15 166 aa8.46□□□□□ -1.06
RPAIN-215ENST00000575112 ACOX3O15254 700 aa8.46□□□□□ -1.06
RPAIN-215ENST00000575112 OR4F21O95013 312 aa8.46□□□□□ -1.06
RPAIN-215ENST00000575112 C1RP00736 705 aa8.46□□□□□ -1.06
RPAIN-215ENST00000575112 RBP1P09455 135 aa8.46□□□□□ -1.06
RPAIN-215ENST00000575112 CAPN3P20807 821 aa8.46□□□□□ -1.06
RPAIN-215ENST00000575112 NKX2-5P52952 324 aaPredicted RBP8.46□□□□□ -1.06
RPAIN-215ENST00000575112 KCNK10P57789 538 aa8.46□□□□□ -1.06
RPAIN-215ENST00000575112 RPL26P61254 145 aaKnown RBP8.46□□□□□ -1.06
RPAIN-215ENST00000575112 LSM3P62310 102 aaKnown RBP8.46□□□□□ -1.06
RPAIN-215ENST00000575112 MERTKQ12866 999 aa8.46□□□□□ -1.06
RPAIN-215ENST00000575112 LAPTM4AQ15012 233 aa8.46□□□□□ -1.06
RPAIN-215ENST00000575112 ZBED5Q49AG3 693 aa8.46□□□□□ -1.06
RPAIN-215ENST00000575112 DSG4Q86SJ6 1040 aa8.46□□□□□ -1.06
RPAIN-215ENST00000575112 ITIH5Q86UX2 942 aa8.46□□□□□ -1.06
RPAIN-215ENST00000575112 DHFR2Q86XF0 187 aa8.46□□□□□ -1.06
RPAIN-215ENST00000575112 SLC44A2Q8IWA5 706 aaPredicted RBP8.46□□□□□ -1.06
RPAIN-215ENST00000575112 PNPT1Q8TCS8 783 aaKnown RBP8.46□□□□□ -1.06
RPAIN-215ENST00000575112 TMEM169Q96HH4 297 aa8.46□□□□□ -1.06
RPAIN-215ENST00000575112 COX4I2Q96KJ9 171 aa8.46□□□□□ -1.06
RPAIN-215ENST00000575112 SLC2A13Q96QE2 648 aa8.46□□□□□ -1.06
RPAIN-215ENST00000575112 VAT1Q99536 393 aa8.46□□□□□ -1.06
RPAIN-215ENST00000575112 UNC93B1Q9H1C4 597 aa8.46□□□□□ -1.06
RPAIN-215ENST00000575112 OLA1Q9NTK5 396 aaKnown RBP8.46□□□□□ -1.06
RPAIN-215ENST00000575112 WWOXQ9NZC7 414 aa8.46□□□□□ -1.06
RPAIN-215ENST00000575112 KLQ9UEF7 1012 aa8.46□□□□□ -1.06
RPAIN-215ENST00000575112 MBLAC1A4D2B0 266 aaPredicted RBP8.45□□□□□ -1.06
RPAIN-215ENST00000575112 TMEM114B3SHH9 223 aa8.45□□□□□ -1.06
RPAIN-215ENST00000575112 SNRPB2P08579 225 aaKnown RBP8.45□□□□□ -1.06
RPAIN-215ENST00000575112 BMP1P13497 986 aa8.45□□□□□ -1.06
RPAIN-215ENST00000575112 TACR2P21452 398 aa8.45□□□□□ -1.06
RPAIN-215ENST00000575112 CCNCP24863 283 aa8.45□□□□□ -1.06
RPAIN-215ENST00000575112 RPL9P32969 192 aaKnown RBP8.45□□□□□ -1.06
RPAIN-215ENST00000575112 RGRP47804 291 aa8.45□□□□□ -1.06
RPAIN-215ENST00000575112 EIF2B2P49770 351 aaKnown RBP8.45□□□□□ -1.06
RPAIN-215ENST00000575112 ACLYP53396 1101 aa8.45□□□□□ -1.06
RPAIN-215ENST00000575112 HMGCS1Q01581 520 aa8.45□□□□□ -1.06
RPAIN-215ENST00000575112 RAD51Q06609 339 aa8.45□□□□□ -1.06
RPAIN-215ENST00000575112 PGS1Q32NB8 556 aa8.45□□□□□ -1.06
RPAIN-215ENST00000575112 RTP2Q5QGT7 225 aa8.45□□□□□ -1.06
RPAIN-215ENST00000575112 DHRS4L2Q6PKH6 230 aa8.45□□□□□ -1.06
RPAIN-215ENST00000575112 CYS1Q717R9 158 aa8.45□□□□□ -1.06
RPAIN-215ENST00000575112 SLC24A5Q71RS6 500 aa8.45□□□□□ -1.06
RPAIN-215ENST00000575112 PIWIL4Q7Z3Z4 852 aaKnown RBP8.45□□□□□ -1.06
RPAIN-215ENST00000575112 ARHGAP12Q8IWW6 846 aa8.45□□□□□ -1.06
RPAIN-215ENST00000575112 LMNTD1Q8N9Z9 388 aa8.45□□□□□ -1.06
RPAIN-215ENST00000575112 CCDC138Q96M89 665 aa8.45□□□□□ -1.06
RPAIN-215ENST00000575112 FBXO44Q9H4M3 255 aa8.45□□□□□ -1.06
RPAIN-215ENST00000575112 FANCEQ9HB96 536 aa8.45□□□□□ -1.06
RPAIN-215ENST00000575112 SPAG4Q9NPE6 437 aa8.45□□□□□ -1.06
RPAIN-215ENST00000575112 TRPM5Q9NZQ8 1165 aa8.45□□□□□ -1.06
RPAIN-215ENST00000575112 ADAM28Q9UKQ2 775 aa8.45□□□□□ -1.06
RPAIN-215ENST00000575112 NDUFAF1Q9Y375 327 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms