RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 AFTPHQ6ULP2 937 aa10.67□□□□□ -0.7
CCDC40-207ENST00000572253 SCIMPQ6UWF3 145 aa10.67□□□□□ -0.7
CCDC40-207ENST00000572253 CHST15Q7LFX5 561 aaPredicted RBP10.67□□□□□ -0.7
CCDC40-207ENST00000572253 LRRTM3Q86VH5 581 aa10.67□□□□□ -0.7
CCDC40-207ENST00000572253 TEX26Q8N6G2 289 aa10.67□□□□□ -0.7
CCDC40-207ENST00000572253 OR10T2Q8NGX3 314 aa10.67□□□□□ -0.7
CCDC40-207ENST00000572253 ARRDC2Q8TBH0 407 aa10.67□□□□□ -0.7
CCDC40-207ENST00000572253 TRUB1Q8WWH5 349 aaKnown RBP10.67□□□□□ -0.7
CCDC40-207ENST00000572253 RDH12Q96NR8 316 aa10.67□□□□□ -0.7
CCDC40-207ENST00000572253 ZBTB18Q99592 522 aa10.67□□□□□ -0.7
CCDC40-207ENST00000572253 NAA50Q9GZZ1 169 aaKnown RBP10.67□□□□□ -0.7
CCDC40-207ENST00000572253 NMUR1Q9HB89 426 aa10.67□□□□□ -0.7
CCDC40-207ENST00000572253 ZNF639Q9UID6 485 aa10.67□□□□□ -0.7
CCDC40-207ENST00000572253 TRMT6Q9UJA5 497 aaKnown RBP10.67□□□□□ -0.7
CCDC40-207ENST00000572253 C1orf232A0A0U1RR37 186 aa10.67□□□□□ -0.7
CCDC40-207ENST00000572253 BOLA2-SMG1P6H3BVE0 249 aa10.67□□□□□ -0.7
CCDC40-207ENST00000572253 CTSHP09668 335 aa10.67□□□□□ -0.7
CCDC40-207ENST00000572253 BEX3Q00994 111 aa10.67□□□□□ -0.7
CCDC40-207ENST00000572253 BFSP2Q13515 415 aa10.67□□□□□ -0.7
CCDC40-207ENST00000572253 GALNT3Q14435 633 aa10.67□□□□□ -0.7
CCDC40-207ENST00000572253 DCDC5Q6ZRR9 648 aa10.67□□□□□ -0.7
CCDC40-207ENST00000572253 FKBP9P1Q75LS8 142 aa10.67□□□□□ -0.7
CCDC40-207ENST00000572253 KIAA2013Q8IYS2 634 aa10.67□□□□□ -0.7
CCDC40-207ENST00000572253 CENPSQ8N2Z9 138 aa10.67□□□□□ -0.7
CCDC40-207ENST00000572253 GLT1D1Q96MS3 346 aa10.67□□□□□ -0.7
CCDC40-207ENST00000572253 RPRD1AQ96P16 312 aaPredicted RBP10.67□□□□□ -0.7
CCDC40-207ENST00000572253 INTS7Q9NVH2 962 aaKnown RBP10.67□□□□□ -0.7
CCDC40-207ENST00000572253 MYLKQ15746 1914 aa10.66□□□□□ -0.7
CCDC40-207ENST00000572253 NPEPPSL1A6NEC2 478 aa10.66□□□□□ -0.7
CCDC40-207ENST00000572253 IFRD1O00458 451 aaPredicted RBP10.66□□□□□ -0.7
CCDC40-207ENST00000572253 CNTN5O94779 1100 aa10.66□□□□□ -0.7
CCDC40-207ENST00000572253 PRR35P0CG20 571 aa10.66□□□□□ -0.7
CCDC40-207ENST00000572253 OR4D2P58180 307 aa10.66□□□□□ -0.7
CCDC40-207ENST00000572253 TOP3AQ13472 1001 aaPredicted RBP10.66□□□□□ -0.7
CCDC40-207ENST00000572253 GALNT18Q6P9A2 607 aa10.66□□□□□ -0.7
CCDC40-207ENST00000572253 AGMOQ6ZNB7 445 aa10.66□□□□□ -0.7
CCDC40-207ENST00000572253 SYVN1Q86TM6 617 aa10.66□□□□□ -0.7
CCDC40-207ENST00000572253 RALGPS2Q86X27 583 aaPredicted RBP10.66□□□□□ -0.7
CCDC40-207ENST00000572253 ZC3H7AQ8IWR0 971 aaKnown RBP10.66□□□□□ -0.7
CCDC40-207ENST00000572253 BPIFB6Q8NFQ5 453 aa10.66□□□□□ -0.7
CCDC40-207ENST00000572253 BPIFB1Q8TDL5 484 aa10.66□□□□□ -0.7
CCDC40-207ENST00000572253 SH3RF2Q8TEC5 729 aa10.66□□□□□ -0.7
CCDC40-207ENST00000572253 TMBIM1Q969X1 311 aa10.66□□□□□ -0.7
CCDC40-207ENST00000572253 ACDQ96AP0 544 aa10.66□□□□□ -0.7
CCDC40-207ENST00000572253 PARK7Q99497 189 aaKnown RBP10.66□□□□□ -0.7
CCDC40-207ENST00000572253 C17orf80Q9BSJ5 609 aa10.66□□□□□ -0.7
CCDC40-207ENST00000572253 FBXO44Q9H4M3 255 aa10.66□□□□□ -0.7
CCDC40-207ENST00000572253 PRDM5Q9NQX1 630 aaPredicted RBP10.66□□□□□ -0.7
CCDC40-207ENST00000572253 MIA3Q5JRA6 1907 aa10.66□□□□□ -0.7
CCDC40-207ENST00000572253 GPR182O15218 404 aa10.66□□□□□ -0.7
CCDC40-207ENST00000572253 KATNA1O75449 491 aa10.66□□□□□ -0.7
CCDC40-207ENST00000572253 CLPXO76031 633 aa10.66□□□□□ -0.7
CCDC40-207ENST00000572253 NDST3O95803 873 aa10.66□□□□□ -0.7
CCDC40-207ENST00000572253 HPRP00739 348 aa10.66□□□□□ -0.7
CCDC40-207ENST00000572253 ELK4P28324 431 aa10.66□□□□□ -0.7
CCDC40-207ENST00000572253 BMXP51813 675 aa10.66□□□□□ -0.7
CCDC40-207ENST00000572253 EFEMP1Q12805 493 aa10.66□□□□□ -0.7
CCDC40-207ENST00000572253 PTPRCAPQ14761 206 aa10.66□□□□□ -0.7
CCDC40-207ENST00000572253 SKIV2LQ15477 1246 aaKnown RBP10.66□□□□□ -0.7
CCDC40-207ENST00000572253 CRY1Q16526 586 aa10.66□□□□□ -0.7
CCDC40-207ENST00000572253 GPSM1Q86YR5 675 aa10.66□□□□□ -0.7
CCDC40-207ENST00000572253 FAM126BQ8IXS8 530 aa10.66□□□□□ -0.7
CCDC40-207ENST00000572253 CDKN2AIPNLQ96HQ2 116 aa10.66□□□□□ -0.7
CCDC40-207ENST00000572253 RPL10LQ96L21 214 aaKnown RBP10.66□□□□□ -0.7
CCDC40-207ENST00000572253 GPR21Q99679 349 aa10.66□□□□□ -0.7
CCDC40-207ENST00000572253 SLC52A3Q9NQ40 469 aa10.66□□□□□ -0.7
CCDC40-207ENST00000572253 ABI2Q9NYB9 513 aaPredicted RBP10.66□□□□□ -0.7
CCDC40-207ENST00000572253 PCDHGA11Q9Y5H2 935 aa10.66□□□□□ -0.7
CCDC40-207ENST00000572253 TMX2-CTNND1H3BSU7 103 aa10.66□□□□□ -0.7
CCDC40-207ENST00000572253 S100BP04271 92 aaPredicted RBP10.66□□□□□ -0.7
CCDC40-207ENST00000572253 PIRTP0C851 137 aa10.66□□□□□ -0.7
CCDC40-207ENST00000572253 PSMD7P51665 324 aa10.66□□□□□ -0.7
CCDC40-207ENST00000572253 CCR3P51677 355 aa10.66□□□□□ -0.7
CCDC40-207ENST00000572253 IRF5Q13568 498 aa10.66□□□□□ -0.7
CCDC40-207ENST00000572253 TYSND1Q2T9J0 566 aa10.66□□□□□ -0.7
CCDC40-207ENST00000572253 ALFQ53S48 1182 aa10.66□□□□□ -0.7
CCDC40-207ENST00000572253 FBXO48Q5FWF7 155 aa10.66□□□□□ -0.7
CCDC40-207ENST00000572253 MS4A13Q5J8X5 152 aa10.66□□□□□ -0.7
CCDC40-207ENST00000572253 C6orf136Q5SQH8 315 aa10.66□□□□□ -0.7
CCDC40-207ENST00000572253 ZFAND4Q86XD8 727 aa10.66□□□□□ -0.7
CCDC40-207ENST00000572253 HDAC2Q92769 488 aaKnown RBP10.66□□□□□ -0.7
CCDC40-207ENST00000572253 RMDN1Q96DB5 314 aa10.66□□□□□ -0.7
CCDC40-207ENST00000572253 AURKBQ96GD4 344 aaPredicted RBP10.66□□□□□ -0.7
CCDC40-207ENST00000572253 BTN2A3PQ96KV6 586 aa10.66□□□□□ -0.7
CCDC40-207ENST00000572253 SELENONQ9NZV5 590 aa10.66□□□□□ -0.7
CCDC40-207ENST00000572253 CDC7O00311 574 aa10.65□□□□□ -0.7
CCDC40-207ENST00000572253 KPNA4O00629 521 aaPredicted RBP10.65□□□□□ -0.7
CCDC40-207ENST00000572253 SEC14L2O76054 403 aa10.65□□□□□ -0.7
CCDC40-207ENST00000572253 TYMPP19971 482 aa10.65□□□□□ -0.7
CCDC40-207ENST00000572253 CD247P20963 164 aa10.65□□□□□ -0.7
CCDC40-207ENST00000572253 CES1P23141 567 aa10.65□□□□□ -0.7
CCDC40-207ENST00000572253 HRH2P25021 359 aa10.65□□□□□ -0.7
CCDC40-207ENST00000572253 MTHFRP42898 656 aa10.65□□□□□ -0.7
CCDC40-207ENST00000572253 BCAP31P51572 246 aa10.65□□□□□ -0.7
CCDC40-207ENST00000572253 YBEYP58557 167 aaPredicted RBP10.65□□□□□ -0.7
CCDC40-207ENST00000572253 BTG3Q14201 252 aaPredicted RBP10.65□□□□□ -0.7
CCDC40-207ENST00000572253 SEMA3AQ14563 771 aa10.65□□□□□ -0.7
CCDC40-207ENST00000572253 PTPRNQ16849 979 aa10.65□□□□□ -0.7
CCDC40-207ENST00000572253 TRIM16LQ309B1 348 aa10.65□□□□□ -0.7
CCDC40-207ENST00000572253 XKR7Q5GH72 579 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms