RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 H3BMM5 538 aa23.05■■□□□ 1.28
LINC00543-201ENST00000567234 ZNF197O14709 1029 aa23.05■■□□□ 1.28
LINC00543-201ENST00000567234 PABPC1P11940 636 aaKnown RBP23.05■■□□□ 1.28
LINC00543-201ENST00000567234 MTHFD2P13995 350 aa23.05■■□□□ 1.28
LINC00543-201ENST00000567234 EPCAMP16422 314 aa23.05■■□□□ 1.28
LINC00543-201ENST00000567234 EPHA3P29320 983 aa23.05■■□□□ 1.28
LINC00543-201ENST00000567234 CPOXP36551 454 aa23.05■■□□□ 1.28
LINC00543-201ENST00000567234 CTSOP43234 321 aaPredicted RBP23.05■■□□□ 1.28
LINC00543-201ENST00000567234 UNC50Q53HI1 259 aa23.05■■□□□ 1.28
LINC00543-201ENST00000567234 LYPLAL1Q5VWZ2 237 aa23.05■■□□□ 1.28
LINC00543-201ENST00000567234 SPNS2Q8IVW8 549 aa23.05■■□□□ 1.28
LINC00543-201ENST00000567234 RYBPQ8N488 228 aaPredicted RBP23.05■■□□□ 1.28
LINC00543-201ENST00000567234 ECHDC3Q96DC8 303 aa23.05■■□□□ 1.28
LINC00543-201ENST00000567234 RPL10LQ96L21 214 aaKnown RBP23.05■■□□□ 1.28
LINC00543-201ENST00000567234 BBS2Q9BXC9 721 aa23.05■■□□□ 1.28
LINC00543-201ENST00000567234 ZNF385DQ9H6B1 395 aa23.05■■□□□ 1.28
LINC00543-201ENST00000567234 C1orf232A0A0U1RR37 186 aa23.05■■□□□ 1.28
LINC00543-201ENST00000567234 A0A1W2PQ67 120 aa23.05■■□□□ 1.28
LINC00543-201ENST00000567234 PRMT5O14744 637 aaPredicted RBP23.05■■□□□ 1.28
LINC00543-201ENST00000567234 RPS3P23396 243 aaKnown RBP eCLIP23.05■■□□□ 1.28
LINC00543-201ENST00000567234 HNF1BP35680 557 aa23.05■■□□□ 1.28
LINC00543-201ENST00000567234 ERVK-21P61565 698 aa23.05■■□□□ 1.28
LINC00543-201ENST00000567234 BTKQ06187 659 aa23.05■■□□□ 1.28
LINC00543-201ENST00000567234 ELMSAN1Q6PJG2 1045 aa23.05■■□□□ 1.28
LINC00543-201ENST00000567234 PLPP6Q8IY26 295 aa23.05■■□□□ 1.28
LINC00543-201ENST00000567234 PHTF2Q8N3S3 785 aa23.05■■□□□ 1.28
LINC00543-201ENST00000567234 MARVELD2Q8N4S9 558 aa23.05■■□□□ 1.28
LINC00543-201ENST00000567234 PAF1Q8N7H5 531 aa23.05■■□□□ 1.28
LINC00543-201ENST00000567234 CEP70Q8NHQ1 597 aa23.05■■□□□ 1.28
LINC00543-201ENST00000567234 FBXO27Q8NI29 283 aa23.05■■□□□ 1.28
LINC00543-201ENST00000567234 MARK1Q9P0L2 795 aa23.05■■□□□ 1.28
LINC00543-201ENST00000567234 PADI4Q9UM07 663 aa23.05■■□□□ 1.28
LINC00543-201ENST00000567234 GOLGA8QA0A0J9YX86 632 aa23.04■■□□□ 1.28
LINC00543-201ENST00000567234 GOLGA8OA6NCC3 632 aa23.04■■□□□ 1.28
LINC00543-201ENST00000567234 NEDD8-MDP1E9PL57 170 aa23.04■■□□□ 1.28
LINC00543-201ENST00000567234 GOLGA8NF8WBI6 632 aa23.04■■□□□ 1.28
LINC00543-201ENST00000567234 DENRO43583 198 aaKnown RBP23.04■■□□□ 1.28
LINC00543-201ENST00000567234 OR1I1O60431 355 aa23.04■■□□□ 1.28
LINC00543-201ENST00000567234 SUPT7LO94864 414 aa23.04■■□□□ 1.28
LINC00543-201ENST00000567234 POP4O95707 220 aaKnown RBP23.04■■□□□ 1.28
LINC00543-201ENST00000567234 VCLP18206 1134 aa23.04■■□□□ 1.28
LINC00543-201ENST00000567234 STK19P49842 368 aaPredicted RBP23.04■■□□□ 1.28
LINC00543-201ENST00000567234 INHBCP55103 352 aa23.04■■□□□ 1.28
LINC00543-201ENST00000567234 ASTLQ6HA08 431 aaPredicted RBP23.04■■□□□ 1.28
LINC00543-201ENST00000567234 SNX20Q7Z614 316 aa23.04■■□□□ 1.28
LINC00543-201ENST00000567234 KIAA1958Q8N8K9 716 aa23.04■■□□□ 1.28
LINC00543-201ENST00000567234 PTGR2Q8N8N7 351 aaPredicted RBP23.04■■□□□ 1.28
LINC00543-201ENST00000567234 ACTRT2Q8TDY3 377 aa23.04■■□□□ 1.28
LINC00543-201ENST00000567234 VOPP1Q96AW1 172 aa23.04■■□□□ 1.28
LINC00543-201ENST00000567234 ZNF641Q96N77 438 aaPredicted RBP23.04■■□□□ 1.28
LINC00543-201ENST00000567234 SLC2A11Q9BYW1 496 aa23.04■■□□□ 1.28
LINC00543-201ENST00000567234 MEAF6Q9HAF1 191 aa23.04■■□□□ 1.28
LINC00543-201ENST00000567234 TRBV5-4A0A0C4DH59 114 aa23.03■■□□□ 1.28
LINC00543-201ENST00000567234 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.03■■□□□ 1.28
LINC00543-201ENST00000567234 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.03■■□□□ 1.28
LINC00543-201ENST00000567234 ARHGAP10A1A4S6 786 aa23.03■■□□□ 1.28
LINC00543-201ENST00000567234 SDHDO14521 159 aa23.03■■□□□ 1.28
LINC00543-201ENST00000567234 NEMP1O14524 444 aa23.03■■□□□ 1.28
LINC00543-201ENST00000567234 COX4I1P13073 169 aa23.03■■□□□ 1.28
LINC00543-201ENST00000567234 ZNF7P17097 686 aaPredicted RBP23.03■■□□□ 1.28
LINC00543-201ENST00000567234 GKP32189 559 aa23.03■■□□□ 1.28
LINC00543-201ENST00000567234 IL2P60568 153 aa23.03■■□□□ 1.28
LINC00543-201ENST00000567234 ECT2LQ008S8 904 aa23.03■■□□□ 1.28
LINC00543-201ENST00000567234 GPM6BQ13491 265 aa23.03■■□□□ 1.28
LINC00543-201ENST00000567234 CARD16Q5EG05 197 aa23.03■■□□□ 1.28
LINC00543-201ENST00000567234 GRAMD4Q6IC98 578 aa23.03■■□□□ 1.28
LINC00543-201ENST00000567234 KIAA0907Q7Z7F0 614 aaPredicted RBP23.03■■□□□ 1.28
LINC00543-201ENST00000567234 CD200R1Q8TD46 325 aa23.03■■□□□ 1.28
LINC00543-201ENST00000567234 PDLIM5Q96HC4 596 aaKnown RBP23.03■■□□□ 1.28
LINC00543-201ENST00000567234 SUV39H2Q9H5I1 410 aa23.03■■□□□ 1.28
LINC00543-201ENST00000567234 PREBQ9HCU5 417 aa23.03■■□□□ 1.28
LINC00543-201ENST00000567234 RNF112Q9ULX5 631 aa23.03■■□□□ 1.28
LINC00543-201ENST00000567234 PDE4DIPQ5VU43 2346 aa23.03■■□□□ 1.28
LINC00543-201ENST00000567234 TRANK1O15050 2925 aa23.03■■□□□ 1.28
LINC00543-201ENST00000567234 UBXN8O00124 270 aa23.03■■□□□ 1.28
LINC00543-201ENST00000567234 GAPDHSO14556 408 aaPredicted RBP23.03■■□□□ 1.28
LINC00543-201ENST00000567234 SLC9A3R1O14745 358 aaPredicted RBP23.03■■□□□ 1.28
LINC00543-201ENST00000567234 NIPSNAP2O75323 286 aa23.03■■□□□ 1.28
LINC00543-201ENST00000567234 PRAMEF1O95521 474 aa23.03■■□□□ 1.28
LINC00543-201ENST00000567234 THRAP10827 490 aa23.03■■□□□ 1.28
LINC00543-201ENST00000567234 TYRP14679 529 aa23.03■■□□□ 1.28
LINC00543-201ENST00000567234 ITGALP20701 1170 aa23.03■■□□□ 1.28
LINC00543-201ENST00000567234 CREB5Q02930 508 aa23.03■■□□□ 1.28
LINC00543-201ENST00000567234 CYLC2Q14093 348 aaPredicted RBP23.03■■□□□ 1.28
LINC00543-201ENST00000567234 GPR33Q49SQ1 333 aa23.03■■□□□ 1.28
LINC00543-201ENST00000567234 CATSPER1Q8NEC5 780 aa23.03■■□□□ 1.28
LINC00543-201ENST00000567234 SCRN2Q96FV2 425 aa23.03■■□□□ 1.28
LINC00543-201ENST00000567234 EBF3Q9H4W6 596 aa23.03■■□□□ 1.28
LINC00543-201ENST00000567234 TRAF6Q9Y4K3 522 aa23.03■■□□□ 1.28
LINC00543-201ENST00000567234 SEC23IPQ9Y6Y8 1000 aaKnown RBP23.03■■□□□ 1.28
LINC00543-201ENST00000567234 NUP210Q8TEM1 1887 aaPredicted RBP23.02■■□□□ 1.28
LINC00543-201ENST00000567234 A0A0U1RQS6 177 aa23.02■■□□□ 1.28
LINC00543-201ENST00000567234 TMEM233B4DJY2 109 aa23.02■■□□□ 1.28
LINC00543-201ENST00000567234 E5RI56 91 aa23.02■■□□□ 1.28
LINC00543-201ENST00000567234 KLK8O60259 260 aa23.02■■□□□ 1.28
LINC00543-201ENST00000567234 CLDN7O95471 211 aa23.02■■□□□ 1.28
LINC00543-201ENST00000567234 TSPAN12O95859 305 aa23.02■■□□□ 1.28
LINC00543-201ENST00000567234 JUNP05412 331 aaKnown RBP23.02■■□□□ 1.28
LINC00543-201ENST00000567234 FGF4P08620 206 aa23.02■■□□□ 1.28
LINC00543-201ENST00000567234 RAB15P59190 212 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms