RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 CCDC25Q86WR0 208 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 IQCA1Q86XH1 822 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 ADGRF4Q8IZF3 695 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 FAM76AQ8TAV0 307 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 ZFPM2Q8WW38 1151 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 CHCHD6Q9BRQ6 235 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 DESI2Q9BSY9 194 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 TRIM2Q9C040 744 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 UBA5Q9GZZ9 404 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 SFXN1Q9H9B4 322 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 SQORQ9Y6N5 450 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 PLIN4Q96Q06 1357 aa4.29□□□□□ -1.72
LINC00561-201ENST00000565815 H3BQ06 376 aaPredicted RBP4.29□□□□□ -1.72
LINC00561-201ENST00000565815 MSI1O43347 362 aaKnown RBP4.29□□□□□ -1.72
LINC00561-201ENST00000565815 TACC1O75410 805 aa4.29□□□□□ -1.72
LINC00561-201ENST00000565815 GJB3O75712 270 aa4.29□□□□□ -1.72
LINC00561-201ENST00000565815 ADAP00813 363 aa4.29□□□□□ -1.72
LINC00561-201ENST00000565815 ENO1P06733 434 aaKnown RBP4.29□□□□□ -1.72
LINC00561-201ENST00000565815 STAG3L1P0CL83 205 aa4.29□□□□□ -1.72
LINC00561-201ENST00000565815 MTHFRP42898 656 aa4.29□□□□□ -1.72
LINC00561-201ENST00000565815 RXRGP48443 463 aa4.29□□□□□ -1.72
LINC00561-201ENST00000565815 STAT2P52630 851 aa4.29□□□□□ -1.72
LINC00561-201ENST00000565815 PSMC6P62333 389 aa4.29□□□□□ -1.72
LINC00561-201ENST00000565815 HYAL1Q12794 435 aa4.29□□□□□ -1.72
LINC00561-201ENST00000565815 PRICKLE4Q2TBC4 344 aa4.29□□□□□ -1.72
LINC00561-201ENST00000565815 SLC9B1Q4ZJI4 515 aa4.29□□□□□ -1.72
LINC00561-201ENST00000565815 SMRP1Q8NCR6 262 aa4.29□□□□□ -1.72
LINC00561-201ENST00000565815 NELFBQ8WX92 580 aa4.29□□□□□ -1.72
LINC00561-201ENST00000565815 ZNF764Q96H86 408 aaPredicted RBP4.29□□□□□ -1.72
LINC00561-201ENST00000565815 ALS2CR12Q96Q35 445 aa4.29□□□□□ -1.72
LINC00561-201ENST00000565815 IWS1Q96ST2 819 aa4.29□□□□□ -1.72
LINC00561-201ENST00000565815 PIP5K1AQ99755 562 aa4.29□□□□□ -1.72
LINC00561-201ENST00000565815 SENP7Q9BQF6 1050 aa4.29□□□□□ -1.72
LINC00561-201ENST00000565815 LZTS2Q9BRK4 669 aa4.29□□□□□ -1.72
LINC00561-201ENST00000565815 CCSER1Q9C0I3 900 aa4.29□□□□□ -1.72
LINC00561-201ENST00000565815 RSPH14Q9UHP6 348 aa4.29□□□□□ -1.72
LINC00561-201ENST00000565815 HPCAL4Q9UM19 191 aa4.29□□□□□ -1.72
LINC00561-201ENST00000565815 TBX20Q9UMR3 447 aa4.29□□□□□ -1.72
LINC00561-201ENST00000565815 JRKLQ9Y4A0 524 aa4.29□□□□□ -1.72
LINC00561-201ENST00000565815 PIEZO1Q92508 2521 aa4.29□□□□□ -1.72
LINC00561-201ENST00000565815 GREB1LQ9C091 1923 aaPredicted RBP4.29□□□□□ -1.72
LINC00561-201ENST00000565815 C2CD4BA6NLJ0 364 aa4.29□□□□□ -1.72
LINC00561-201ENST00000565815 LINC01548A6NM66 108 aa4.29□□□□□ -1.72
LINC00561-201ENST00000565815 EBAG9O00559 213 aa4.29□□□□□ -1.72
LINC00561-201ENST00000565815 SLC25A17O43808 307 aa4.29□□□□□ -1.72
LINC00561-201ENST00000565815 LCA5LO95447 670 aa4.29□□□□□ -1.72
LINC00561-201ENST00000565815 NDUFB10O96000 172 aa4.29□□□□□ -1.72
LINC00561-201ENST00000565815 F9P00740 461 aa4.29□□□□□ -1.72
LINC00561-201ENST00000565815 RPN1P04843 607 aaKnown RBP4.29□□□□□ -1.72
LINC00561-201ENST00000565815 KLRC2P26717 231 aa4.29□□□□□ -1.72
LINC00561-201ENST00000565815 TACR3P29371 465 aa4.29□□□□□ -1.72
LINC00561-201ENST00000565815 ELF1P32519 619 aa4.29□□□□□ -1.72
LINC00561-201ENST00000565815 CTNNB1P35222 781 aa4.29□□□□□ -1.72
LINC00561-201ENST00000565815 TRAF1Q13077 416 aa4.29□□□□□ -1.72
LINC00561-201ENST00000565815 DRP2Q13474 957 aa4.29□□□□□ -1.72
LINC00561-201ENST00000565815 GALNT3Q14435 633 aa4.29□□□□□ -1.72
LINC00561-201ENST00000565815 SEMA3AQ14563 771 aa4.29□□□□□ -1.72
LINC00561-201ENST00000565815 SHROOM1Q2M3G4 852 aaPredicted RBP4.29□□□□□ -1.72
LINC00561-201ENST00000565815 ASPHD1Q5U4P2 390 aa4.29□□□□□ -1.72
LINC00561-201ENST00000565815 NUGGCQ68CJ6 796 aa4.29□□□□□ -1.72
LINC00561-201ENST00000565815 HMBOX1Q6NT76 420 aa4.29□□□□□ -1.72
LINC00561-201ENST00000565815 DENND1BQ6P3S1 775 aa4.29□□□□□ -1.72
LINC00561-201ENST00000565815 VSTM1Q6UX27 236 aa4.29□□□□□ -1.72
LINC00561-201ENST00000565815 CCNI2Q6ZMN8 369 aaPredicted RBP4.29□□□□□ -1.72
LINC00561-201ENST00000565815 TMTC3Q6ZXV5 915 aa4.29□□□□□ -1.72
LINC00561-201ENST00000565815 YTHDF3Q7Z739 585 aaKnown RBP4.29□□□□□ -1.72
LINC00561-201ENST00000565815 ADGRA1Q86SQ6 560 aa4.29□□□□□ -1.72
LINC00561-201ENST00000565815 KLBQ86Z14 1044 aa4.29□□□□□ -1.72
LINC00561-201ENST00000565815 ZNF444Q8N0Y2 327 aaPredicted RBP4.29□□□□□ -1.72
LINC00561-201ENST00000565815 RNF10Q8N5U6 811 aaKnown RBP4.29□□□□□ -1.72
LINC00561-201ENST00000565815 LRRC57Q8N9N7 239 aa4.29□□□□□ -1.72
LINC00561-201ENST00000565815 SUSD6Q92537 303 aa4.29□□□□□ -1.72
LINC00561-201ENST00000565815 JAKMIP2Q96AA8 810 aa4.29□□□□□ -1.72
LINC00561-201ENST00000565815 ERGIC2Q96RQ1 377 aa4.29□□□□□ -1.72
LINC00561-201ENST00000565815 SH3GL2Q99962 352 aa4.29□□□□□ -1.72
LINC00561-201ENST00000565815 RAVER2Q9HCJ3 691 aaKnown RBP4.29□□□□□ -1.72
LINC00561-201ENST00000565815 CYP39A1Q9NYL5 469 aa4.29□□□□□ -1.72
LINC00561-201ENST00000565815 TTC28Q96AY4 2481 aa4.29□□□□□ -1.72
LINC00561-201ENST00000565815 ZNF318Q5VUA4 2279 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 IGKV6D-41A0A0C4DH26 115 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.28□□□□□ -1.72
LINC00561-201ENST00000565815 DYTNA2CJ06 578 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 TTC34A8MYJ7 566 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 TP73O15350 636 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 INPPL1O15357 1258 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 CEP104O60308 925 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 METTL18O95568 372 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 ANXA13P27216 316 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 TUBA4AP68366 448 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 DEFB103AP81534 67 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 SETQ01105 290 aaPredicted RBP4.28□□□□□ -1.72
LINC00561-201ENST00000565815 UBXN1Q04323 297 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 KIF5AQ12840 1032 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 MTF1Q14872 753 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 PLCB4Q15147 1175 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 SPA17Q15506 151 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 CCDC122Q5T0U0 273 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 LRRC8EQ6NSJ5 796 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 LRRC31Q6UY01 552 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 RD3Q7Z3Z2 195 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms