RNA–Protein interactions for RNA: ENST00000562791.1

CHD9-206, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 242 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-206ENST00000562791 WDR5BQ86VZ2 330 aa4.63□□□□□ -1.67
CHD9-206ENST00000562791 NLRP14Q86W24 1093 aa4.63□□□□□ -1.67
CHD9-206ENST00000562791 FAM228AQ86W67 206 aa4.63□□□□□ -1.67
CHD9-206ENST00000562791 XXYLT1Q8NBI6 393 aa4.63□□□□□ -1.67
CHD9-206ENST00000562791 TMED6Q8WW62 240 aa4.63□□□□□ -1.67
CHD9-206ENST00000562791 HERVK_113Q902F9 699 aa4.63□□□□□ -1.67
CHD9-206ENST00000562791 AZIN2Q96A70 460 aa4.63□□□□□ -1.67
CHD9-206ENST00000562791 EFHD2Q96C19 240 aaPredicted RBP4.63□□□□□ -1.67
CHD9-206ENST00000562791 EGLN2Q96KS0 407 aa4.63□□□□□ -1.67
CHD9-206ENST00000562791 SPATA17Q96L03 361 aa4.63□□□□□ -1.67
CHD9-206ENST00000562791 TSG101Q99816 390 aa4.63□□□□□ -1.67
CHD9-206ENST00000562791 CIB1Q99828 191 aa4.63□□□□□ -1.67
CHD9-206ENST00000562791 GPATCH1Q9BRR8 931 aaKnown RBP4.63□□□□□ -1.67
CHD9-206ENST00000562791 INTS2Q9H0H0 1204 aaKnown RBP4.63□□□□□ -1.67
CHD9-206ENST00000562791 CDT1Q9H211 546 aa4.63□□□□□ -1.67
CHD9-206ENST00000562791 UBN1Q9NPG3 1134 aa4.63□□□□□ -1.67
CHD9-206ENST00000562791 CCDC177Q9NQR7 707 aaPredicted RBP4.63□□□□□ -1.67
CHD9-206ENST00000562791 ABCF3Q9NUQ8 709 aa4.63□□□□□ -1.67
CHD9-206ENST00000562791 EHD2Q9NZN4 543 aa4.63□□□□□ -1.67
CHD9-206ENST00000562791 LUZP4Q9P127 313 aa4.63□□□□□ -1.67
CHD9-206ENST00000562791 LRFN1Q9P244 771 aa4.63□□□□□ -1.67
CHD9-206ENST00000562791 VPS18Q9P253 973 aa4.63□□□□□ -1.67
CHD9-206ENST00000562791 KIF17Q9P2E2 1029 aa4.63□□□□□ -1.67
CHD9-206ENST00000562791 PDP2Q9P2J9 529 aa4.63□□□□□ -1.67
CHD9-206ENST00000562791 KLQ9UEF7 1012 aa4.63□□□□□ -1.67
CHD9-206ENST00000562791 OSGIN2Q9Y236 505 aa4.63□□□□□ -1.67
CHD9-206ENST00000562791 LRCH1Q9Y2L9 728 aa4.63□□□□□ -1.67
CHD9-206ENST00000562791 NFE2L3Q9Y4A8 694 aa4.63□□□□□ -1.67
CHD9-206ENST00000562791 TTC41PQ6P2S7 1318 aa4.63□□□□□ -1.67
CHD9-206ENST00000562791 ANKRD30AQ9BXX3 1397 aa4.63□□□□□ -1.67
CHD9-206ENST00000562791 POLR1AO95602 1720 aaPredicted RBP4.63□□□□□ -1.67
CHD9-206ENST00000562791 ATP10AO60312 1499 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 SHROOM2Q13796 1616 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.62□□□□□ -1.67
CHD9-206ENST00000562791 SYCE3A1L190 88 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 MACROD2A1Z1Q3 448 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 PI4K2BG5E9Z4 385 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 HSPB6O14558 160 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 SYN3O14994 580 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 NCAM2O15394 837 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 RANBP6O60518 1105 aaKnown RBP4.62□□□□□ -1.67
CHD9-206ENST00000562791 TSPAN9O75954 239 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 SLITRK3O94933 977 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 POP4O95707 220 aaKnown RBP4.62□□□□□ -1.67
CHD9-206ENST00000562791 CLTAP09496 248 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 MYZAPP0CAP1 466 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 CHN1P15882 459 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 HMOX2P30519 316 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 AXLP30530 894 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 CTNNA1P35221 906 aaKnown RBP4.62□□□□□ -1.67
CHD9-206ENST00000562791 HNF1BP35680 557 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 AARSP49588 968 aaKnown RBP eCLIP4.62□□□□□ -1.67
CHD9-206ENST00000562791 CLCNKBP51801 687 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 CDH12P55289 794 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 S100A12P80511 92 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 BNC1Q01954 994 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 DNAJC3Q13217 504 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 ITGB3BPQ13352 177 aaPredicted RBP4.62□□□□□ -1.67
CHD9-206ENST00000562791 XRCC4Q13426 336 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 NR1D2Q14995 579 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 STK38Q15208 465 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 OASLQ15646 514 aaKnown RBP4.62□□□□□ -1.67
CHD9-206ENST00000562791 FAM83BQ5T0W9 1011 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 ATG9BQ674R7 924 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.62□□□□□ -1.67
CHD9-206ENST00000562791 KDELC1Q6UW63 502 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 ZNF704Q6ZNC4 412 aaPredicted RBP4.62□□□□□ -1.67
CHD9-206ENST00000562791 USP43Q70EL4 1123 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 CREB3L2Q70SY1 520 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 GALNT7Q86SF2 657 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 HACE1Q8IYU2 909 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 FAM9CQ8IZT9 166 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 CPXCR1Q8N123 301 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 PTGR2Q8N8N7 351 aaPredicted RBP4.62□□□□□ -1.67
CHD9-206ENST00000562791 SLC22A8Q8TCC7 542 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 WFIKKN2Q8TEU8 576 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 SLC35F5Q8WV83 523 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 POF1BQ8WVV4 589 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 DNASE2BQ8WZ79 361 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 DHX58Q96C10 678 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 ANKRD36BP1Q96IX9 119 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 ZNF333Q96JL9 665 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 SECISBP2Q96T21 854 aaKnown RBP4.62□□□□□ -1.67
CHD9-206ENST00000562791 RMDN3Q96TC7 470 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 GAL3ST1Q99999 423 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 BPIFA3Q9BQP9 254 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 IFT27Q9BW83 186 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 NDEL1Q9GZM8 345 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.62□□□□□ -1.67
CHD9-206ENST00000562791 HAUS4Q9H6D7 363 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 VIPAS39Q9H9C1 493 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 VPS37BQ9H9H4 285 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 UCK1Q9HA47 277 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 C8orf4Q9NR00 106 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 SDHAF3Q9NRP4 125 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 FARSBQ9NSD9 589 aaKnown RBP4.62□□□□□ -1.67
CHD9-206ENST00000562791 TXLNGQ9NUQ3 528 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 MRGBPQ9NV56 204 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 NDUFAF4Q9P032 175 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 MDFICQ9P1T7 246 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms