RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 CETN2P41208 172 aa9.21□□□□□ -0.94
SMAD3-215ENST00000560424 GARSP41250 739 aaKnown RBP9.21□□□□□ -0.94
SMAD3-215ENST00000560424 PER3P56645 1201 aa9.21□□□□□ -0.94
SMAD3-215ENST00000560424 POLR2LP62875 67 aaKnown RBP9.21□□□□□ -0.94
SMAD3-215ENST00000560424 HHEXQ03014 270 aa9.21□□□□□ -0.94
SMAD3-215ENST00000560424 KLF1Q13351 362 aaPredicted RBP9.21□□□□□ -0.94
SMAD3-215ENST00000560424 NFATC2Q13469 925 aa9.21□□□□□ -0.94
SMAD3-215ENST00000560424 DNASE1L3Q13609 305 aa9.21□□□□□ -0.94
SMAD3-215ENST00000560424 KRTAP21-3Q3LHN1 58 aa9.21□□□□□ -0.94
SMAD3-215ENST00000560424 WDR93Q6P2C0 686 aa9.21□□□□□ -0.94
SMAD3-215ENST00000560424 CYB5D1Q6P9G0 228 aa9.21□□□□□ -0.94
SMAD3-215ENST00000560424 DOK6Q6PKX4 331 aa9.21□□□□□ -0.94
SMAD3-215ENST00000560424 CYP4V2Q6ZWL3 525 aaPredicted RBP9.21□□□□□ -0.94
SMAD3-215ENST00000560424 CPNE8Q86YQ8 564 aa9.21□□□□□ -0.94
SMAD3-215ENST00000560424 SLC13A5Q86YT5 568 aaPredicted RBP9.21□□□□□ -0.94
SMAD3-215ENST00000560424 HPS6Q86YV9 775 aa9.21□□□□□ -0.94
SMAD3-215ENST00000560424 PLXDC1Q8IUK5 500 aa9.21□□□□□ -0.94
SMAD3-215ENST00000560424 MCEMP1Q8IX19 187 aa9.21□□□□□ -0.94
SMAD3-215ENST00000560424 EMC1Q8N766 993 aa9.21□□□□□ -0.94
SMAD3-215ENST00000560424 NOA1Q8NC60 698 aaKnown RBP9.21□□□□□ -0.94
SMAD3-215ENST00000560424 LRRN4CLQ8ND94 238 aa9.21□□□□□ -0.94
SMAD3-215ENST00000560424 SH3KBP1Q96B97 665 aa9.21□□□□□ -0.94
SMAD3-215ENST00000560424 TBC1D31Q96DN5 1066 aa9.21□□□□□ -0.94
SMAD3-215ENST00000560424 NUS1Q96E22 293 aa9.21□□□□□ -0.94
SMAD3-215ENST00000560424 MS4A14Q96JA4 679 aa9.21□□□□□ -0.94
SMAD3-215ENST00000560424 ATP13A3Q9H7F0 1226 aa9.21□□□□□ -0.94
SMAD3-215ENST00000560424 HOMER3Q9NSC5 361 aa9.21□□□□□ -0.94
SMAD3-215ENST00000560424 TMEM248Q9NWD8 314 aa9.21□□□□□ -0.94
SMAD3-215ENST00000560424 KCTD5Q9NXV2 234 aa9.21□□□□□ -0.94
SMAD3-215ENST00000560424 ITGB1BP2Q9UKP3 347 aa9.21□□□□□ -0.94
SMAD3-215ENST00000560424 RAB21Q9UL25 225 aa9.21□□□□□ -0.94
SMAD3-215ENST00000560424 PADI1Q9ULC6 663 aa9.21□□□□□ -0.94
SMAD3-215ENST00000560424 ENTPD4Q9Y227 616 aa9.21□□□□□ -0.94
SMAD3-215ENST00000560424 PCDHGB7Q9Y5F8 929 aa9.21□□□□□ -0.94
SMAD3-215ENST00000560424 F8P00451 2351 aa9.21□□□□□ -0.94
SMAD3-215ENST00000560424 FAM170AA1A519 330 aa9.2□□□□□ -0.94
SMAD3-215ENST00000560424 ARGFXA6NJG6 315 aa9.2□□□□□ -0.94
SMAD3-215ENST00000560424 C3orf70A6NLC5 250 aaPredicted RBP9.2□□□□□ -0.94
SMAD3-215ENST00000560424 A8MX80 341 aa9.2□□□□□ -0.94
SMAD3-215ENST00000560424 C21orf140B9A014 251 aa9.2□□□□□ -0.94
SMAD3-215ENST00000560424 MAP3K6O95382 1288 aa9.2□□□□□ -0.94
SMAD3-215ENST00000560424 RECKO95980 971 aa9.2□□□□□ -0.94
SMAD3-215ENST00000560424 CEACAM5P06731 702 aa9.2□□□□□ -0.94
SMAD3-215ENST00000560424 PRF1P14222 555 aa9.2□□□□□ -0.94
SMAD3-215ENST00000560424 MCM3P25205 808 aa9.2□□□□□ -0.94
SMAD3-215ENST00000560424 NFKBIAP25963 317 aa9.2□□□□□ -0.94
SMAD3-215ENST00000560424 MIPP30301 263 aa9.2□□□□□ -0.94
SMAD3-215ENST00000560424 FASLGP48023 281 aa9.2□□□□□ -0.94
SMAD3-215ENST00000560424 FNTAP49354 379 aa9.2□□□□□ -0.94
SMAD3-215ENST00000560424 ARSEP51690 589 aa9.2□□□□□ -0.94
SMAD3-215ENST00000560424 HDAC4P56524 1084 aa9.2□□□□□ -0.94
SMAD3-215ENST00000560424 RPS15P62841 145 aaKnown RBP9.2□□□□□ -0.94
SMAD3-215ENST00000560424 CDK18Q07002 472 aa9.2□□□□□ -0.94
SMAD3-215ENST00000560424 CHAF1BQ13112 559 aa9.2□□□□□ -0.94
SMAD3-215ENST00000560424 PDK2Q15119 407 aa9.2□□□□□ -0.94
SMAD3-215ENST00000560424 LONRF2Q1L5Z9 754 aa9.2□□□□□ -0.94
SMAD3-215ENST00000560424 ERCC6LQ2NKX8 1250 aa9.2□□□□□ -0.94
SMAD3-215ENST00000560424 DENND2CQ68D51 928 aa9.2□□□□□ -0.94
SMAD3-215ENST00000560424 RAET1GQ6H3X3 334 aa9.2□□□□□ -0.94
SMAD3-215ENST00000560424 CCDC70Q6NSX1 233 aa9.2□□□□□ -0.94
SMAD3-215ENST00000560424 DRICH1Q6PGQ1 229 aaPredicted RBP9.2□□□□□ -0.94
SMAD3-215ENST00000560424 LIPIQ6XZB0 460 aa9.2□□□□□ -0.94
SMAD3-215ENST00000560424 IQCKQ8N0W5 287 aa9.2□□□□□ -0.94
SMAD3-215ENST00000560424 EIF1ADQ8N9N8 165 aaKnown RBP9.2□□□□□ -0.94
SMAD3-215ENST00000560424 SLC37A2Q8TED4 501 aa9.2□□□□□ -0.94
SMAD3-215ENST00000560424 ANKRD7Q92527 254 aa9.2□□□□□ -0.94
SMAD3-215ENST00000560424 SLCO2A1Q92959 643 aa9.2□□□□□ -0.94
SMAD3-215ENST00000560424 PNPLA2Q96AD5 504 aa9.2□□□□□ -0.94
SMAD3-215ENST00000560424 ELMO2Q96JJ3 720 aa9.2□□□□□ -0.94
SMAD3-215ENST00000560424 CFAP57Q96MR6 1250 aa9.2□□□□□ -0.94
SMAD3-215ENST00000560424 OR2M4Q96R27 311 aa9.2□□□□□ -0.94
SMAD3-215ENST00000560424 TUBGCP5Q96RT8 1024 aa9.2□□□□□ -0.94
SMAD3-215ENST00000560424 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.2□□□□□ -0.94
SMAD3-215ENST00000560424 FRMD8P1Q9BZ68 369 aaPredicted RBP9.2□□□□□ -0.94
SMAD3-215ENST00000560424 UNKQ9C0B0 810 aaKnown RBP9.2□□□□□ -0.94
SMAD3-215ENST00000560424 ING2Q9H160 280 aa9.2□□□□□ -0.94
SMAD3-215ENST00000560424 ACTL8Q9H568 366 aa9.2□□□□□ -0.94
SMAD3-215ENST00000560424 LRRC19Q9H756 370 aa9.2□□□□□ -0.94
SMAD3-215ENST00000560424 UBA2Q9UBT2 640 aaPredicted RBP9.2□□□□□ -0.94
SMAD3-215ENST00000560424 PCDHGA6Q9Y5G7 932 aa9.2□□□□□ -0.94
SMAD3-215ENST00000560424 HEATR9A2RTY3 570 aa9.19□□□□□ -0.94
SMAD3-215ENST00000560424 BHMG1C9JSJ3 638 aaPredicted RBP9.19□□□□□ -0.94
SMAD3-215ENST00000560424 PRSS44E7EML9 344 aa9.19□□□□□ -0.94
SMAD3-215ENST00000560424 PRPSAP2O60256 369 aa9.19□□□□□ -0.94
SMAD3-215ENST00000560424 RASSF9O75901 435 aa9.19□□□□□ -0.94
SMAD3-215ENST00000560424 SLC2A4P14672 509 aa9.19□□□□□ -0.94
SMAD3-215ENST00000560424 TCF4P15884 667 aa9.19□□□□□ -0.94
SMAD3-215ENST00000560424 ZNF28P17035 718 aa9.19□□□□□ -0.94
SMAD3-215ENST00000560424 IL1R2P27930 398 aa9.19□□□□□ -0.94
SMAD3-215ENST00000560424 CDKN2BP42772 138 aa9.19□□□□□ -0.94
SMAD3-215ENST00000560424 ZNF135P52742 658 aaPredicted RBP9.19□□□□□ -0.94
SMAD3-215ENST00000560424 EPHA4P54764 986 aa9.19□□□□□ -0.94
SMAD3-215ENST00000560424 ATP11AP98196 1134 aa9.19□□□□□ -0.94
SMAD3-215ENST00000560424 CDK3Q00526 305 aa9.19□□□□□ -0.94
SMAD3-215ENST00000560424 BCL2L1Q07817 233 aa9.19□□□□□ -0.94
SMAD3-215ENST00000560424 IL11RAQ14626 422 aa9.19□□□□□ -0.94
SMAD3-215ENST00000560424 SIX1Q15475 284 aaPredicted RBP9.19□□□□□ -0.94
SMAD3-215ENST00000560424 DPYSL2Q16555 572 aa9.19□□□□□ -0.94
SMAD3-215ENST00000560424 CDO1Q16878 200 aa9.19□□□□□ -0.94
SMAD3-215ENST00000560424 UGT8Q16880 541 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms