RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 HEY2Q9UBP5 337 aa6.05□□□□□ -1.44
RTF1-204ENST00000558117 DBNLQ9UJU6 430 aaKnown RBP6.05□□□□□ -1.44
RTF1-204ENST00000558117 PLIN4Q96Q06 1357 aa6.05□□□□□ -1.44
RTF1-204ENST00000558117 NOTCH4Q99466 2003 aa6.04□□□□□ -1.44
RTF1-204ENST00000558117 FBN1P35555 2871 aaKnown RBP6.04□□□□□ -1.44
RTF1-204ENST00000558117 MYBPHLA2RUH7 354 aa6.04□□□□□ -1.44
RTF1-204ENST00000558117 RRN3P2A6NIE6 340 aa6.04□□□□□ -1.44
RTF1-204ENST00000558117 SPECC1L-ADORA2AF8WAN1 911 aa6.04□□□□□ -1.44
RTF1-204ENST00000558117 PRDM1O75626 825 aa6.04□□□□□ -1.44
RTF1-204ENST00000558117 WNT1P04628 370 aa6.04□□□□□ -1.44
RTF1-204ENST00000558117 PSMC3P17980 439 aa6.04□□□□□ -1.44
RTF1-204ENST00000558117 GRK6P43250 576 aa6.04□□□□□ -1.44
RTF1-204ENST00000558117 TMPRSS3P57727 454 aa6.04□□□□□ -1.44
RTF1-204ENST00000558117 B4GALNT1Q00973 533 aa6.04□□□□□ -1.44
RTF1-204ENST00000558117 PDCLQ13371 301 aa6.04□□□□□ -1.44
RTF1-204ENST00000558117 MTX1Q13505 466 aa6.04□□□□□ -1.44
RTF1-204ENST00000558117 CUL4BQ13620 913 aa6.04□□□□□ -1.44
RTF1-204ENST00000558117 PON2Q15165 354 aa6.04□□□□□ -1.44
RTF1-204ENST00000558117 TBRG1Q3YBR2 411 aa6.04□□□□□ -1.44
RTF1-204ENST00000558117 SBK1Q52WX2 424 aa6.04□□□□□ -1.44
RTF1-204ENST00000558117 FAM78AQ5JUQ0 283 aa6.04□□□□□ -1.44
RTF1-204ENST00000558117 VITQ6UXI7 678 aa6.04□□□□□ -1.44
RTF1-204ENST00000558117 RTL10Q7L3V2 364 aa6.04□□□□□ -1.44
RTF1-204ENST00000558117 SYT13Q7L8C5 426 aa6.04□□□□□ -1.44
RTF1-204ENST00000558117 MDGA2Q7Z553 956 aa6.04□□□□□ -1.44
RTF1-204ENST00000558117 GLCCI1Q86VQ1 547 aa6.04□□□□□ -1.44
RTF1-204ENST00000558117 ZNF354CQ86Y25 554 aa6.04□□□□□ -1.44
RTF1-204ENST00000558117 RNF168Q8IYW5 571 aaPredicted RBP6.04□□□□□ -1.44
RTF1-204ENST00000558117 PAQR4Q8N4S7 273 aaPredicted RBP6.04□□□□□ -1.44
RTF1-204ENST00000558117 NKAPQ8N5F7 415 aaKnown RBP6.04□□□□□ -1.44
RTF1-204ENST00000558117 MPLKIPQ8TAP9 179 aa6.04□□□□□ -1.44
RTF1-204ENST00000558117 FGF11Q92914 225 aa6.04□□□□□ -1.44
RTF1-204ENST00000558117 ADAD1Q96M93 576 aaKnown RBP6.04□□□□□ -1.44
RTF1-204ENST00000558117 ZFP14Q9HCL3 533 aa6.04□□□□□ -1.44
RTF1-204ENST00000558117 TBC1D13Q9NVG8 400 aa6.04□□□□□ -1.44
RTF1-204ENST00000558117 HCFC1R1Q9NWW0 138 aa6.04□□□□□ -1.44
RTF1-204ENST00000558117 GINS2Q9Y248 185 aa6.04□□□□□ -1.44
RTF1-204ENST00000558117 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.04□□□□□ -1.44
RTF1-204ENST00000558117 MORC2Q9Y6X9 1032 aaPredicted RBP6.04□□□□□ -1.44
RTF1-204ENST00000558117 APCP25054 2843 aa6.03□□□□□ -1.44
RTF1-204ENST00000558117 SVILO95425 2214 aa6.03□□□□□ -1.44
RTF1-204ENST00000558117 TRBV5-3A0A0A0MS03 114 aa6.03□□□□□ -1.44
RTF1-204ENST00000558117 A0A0U1RQF3 1178 aa6.03□□□□□ -1.44
RTF1-204ENST00000558117 DPPA5A6NC42 116 aa6.03□□□□□ -1.44
RTF1-204ENST00000558117 MYMKA6NI61 221 aa6.03□□□□□ -1.44
RTF1-204ENST00000558117 E7EVH7 732 aa6.03□□□□□ -1.44
RTF1-204ENST00000558117 CCL16O15467 120 aa6.03□□□□□ -1.44
RTF1-204ENST00000558117 ATG13O75143 517 aa6.03□□□□□ -1.44
RTF1-204ENST00000558117 FAM155BO75949 473 aa6.03□□□□□ -1.44
RTF1-204ENST00000558117 ITGB6P18564 788 aa6.03□□□□□ -1.44
RTF1-204ENST00000558117 MARK3P27448 753 aa6.03□□□□□ -1.44
RTF1-204ENST00000558117 HOXA9P31269 272 aa6.03□□□□□ -1.44
RTF1-204ENST00000558117 PTGER3P43115 390 aa6.03□□□□□ -1.44
RTF1-204ENST00000558117 ADPRHP54922 357 aa6.03□□□□□ -1.44
RTF1-204ENST00000558117 GFPT1Q06210 699 aaPredicted RBP6.03□□□□□ -1.44
RTF1-204ENST00000558117 TAF5Q15542 800 aa6.03□□□□□ -1.44
RTF1-204ENST00000558117 ZNF260Q3ZCT1 412 aa6.03□□□□□ -1.44
RTF1-204ENST00000558117 USH1GQ495M9 461 aa6.03□□□□□ -1.44
RTF1-204ENST00000558117 MIDNQ504T8 468 aa6.03□□□□□ -1.44
RTF1-204ENST00000558117 DGAT2L7PQ6IED9 249 aa6.03□□□□□ -1.44
RTF1-204ENST00000558117 KRTAP5-3Q6L8H2 238 aa6.03□□□□□ -1.44
RTF1-204ENST00000558117 ZNF280DQ6N043 979 aa6.03□□□□□ -1.44
RTF1-204ENST00000558117 LRIG3Q6UXM1 1119 aa6.03□□□□□ -1.44
RTF1-204ENST00000558117 SYNE3Q6ZMZ3 975 aa6.03□□□□□ -1.44
RTF1-204ENST00000558117 PIM3Q86V86 326 aa6.03□□□□□ -1.44
RTF1-204ENST00000558117 RALGPS2Q86X27 583 aaPredicted RBP6.03□□□□□ -1.44
RTF1-204ENST00000558117 ERICH1Q86X53 443 aa6.03□□□□□ -1.44
RTF1-204ENST00000558117 ZNF444Q8N0Y2 327 aaPredicted RBP6.03□□□□□ -1.44
RTF1-204ENST00000558117 OR6Y1Q8NGX8 325 aa6.03□□□□□ -1.44
RTF1-204ENST00000558117 SLC2A12Q8TD20 617 aa6.03□□□□□ -1.44
RTF1-204ENST00000558117 CCT6BQ92526 530 aa6.03□□□□□ -1.44
RTF1-204ENST00000558117 KAT2AQ92830 837 aa6.03□□□□□ -1.44
RTF1-204ENST00000558117 RILPL2Q969X0 211 aa6.03□□□□□ -1.44
RTF1-204ENST00000558117 TBC1D20Q96BZ9 403 aa6.03□□□□□ -1.44
RTF1-204ENST00000558117 NPAS1Q99742 590 aa6.03□□□□□ -1.44
RTF1-204ENST00000558117 HDHD5Q9BXW7 423 aa6.03□□□□□ -1.44
RTF1-204ENST00000558117 KRTAP17-1Q9BYP8 105 aa6.03□□□□□ -1.44
RTF1-204ENST00000558117 MYLK2Q9H1R3 596 aa6.03□□□□□ -1.44
RTF1-204ENST00000558117 IL21RQ9HBE5 538 aa6.03□□□□□ -1.44
RTF1-204ENST00000558117 PDE11AQ9HCR9 933 aa6.03□□□□□ -1.44
RTF1-204ENST00000558117 FBXW11Q9UKB1 542 aa6.03□□□□□ -1.44
RTF1-204ENST00000558117 PILRBQ9UKJ0 227 aa6.03□□□□□ -1.44
RTF1-204ENST00000558117 UTS2RQ9UKP6 389 aa6.03□□□□□ -1.44
RTF1-204ENST00000558117 PCDH15Q96QU1 1955 aa6.03□□□□□ -1.44
RTF1-204ENST00000558117 ABCB11O95342 1321 aa6.02□□□□□ -1.45
RTF1-204ENST00000558117 THADAQ6YHU6 1953 aa6.02□□□□□ -1.45
RTF1-204ENST00000558117 STAB1Q9NY15 2570 aa6.02□□□□□ -1.45
RTF1-204ENST00000558117 MTCL1Q9Y4B5 1905 aaKnown RBP6.02□□□□□ -1.45
RTF1-204ENST00000558117 LY6G6EA0A0G2JKS1 128 aa6.02□□□□□ -1.45
RTF1-204ENST00000558117 CCER2I3L3R5 266 aa6.02□□□□□ -1.45
RTF1-204ENST00000558117 ZNF263O14978 683 aa6.02□□□□□ -1.45
RTF1-204ENST00000558117 APBB3O95704 486 aa6.02□□□□□ -1.45
RTF1-204ENST00000558117 SERPINF2P08697 491 aa6.02□□□□□ -1.45
RTF1-204ENST00000558117 HSPD1P10809 573 aaKnown RBP6.02□□□□□ -1.45
RTF1-204ENST00000558117 LYL1P12980 280 aa6.02□□□□□ -1.45
RTF1-204ENST00000558117 CEBPBP17676 345 aa6.02□□□□□ -1.45
RTF1-204ENST00000558117 GLUD2P49448 558 aa6.02□□□□□ -1.45
RTF1-204ENST00000558117 UCNP55089 124 aa6.02□□□□□ -1.45
RTF1-204ENST00000558117 KRTAP10-11P60412 298 aa6.02□□□□□ -1.45
RTF1-204ENST00000558117 CDK18Q07002 472 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms