RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 MCPH1Q8NEM0 835 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 TAS1R2Q8TE23 839 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 NSMAFQ92636 917 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 SLAMF9Q96A28 289 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 FCRL5Q96RD9 977 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 CRACR2AQ9BSW2 395 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 GATA5Q9BWX5 397 aaPredicted RBP3.77□□□□□ -1.81
TDP1-217ENST00000557782 GTPBP2Q9BX10 602 aaKnown RBP3.77□□□□□ -1.81
TDP1-217ENST00000557782 OSBPL8Q9BZF1 889 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 PPIL3Q9H2H8 161 aaKnown RBP3.77□□□□□ -1.81
TDP1-217ENST00000557782 GPR108Q9NPR9 543 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 AURKAIP1Q9NWT8 199 aaPredicted RBP3.77□□□□□ -1.81
TDP1-217ENST00000557782 ANKRD10Q9NXR5 420 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 AATFQ9NY61 560 aaKnown RBP eCLIP3.77□□□□□ -1.81
TDP1-217ENST00000557782 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.77□□□□□ -1.81
TDP1-217ENST00000557782 PPP4R1LQ9P1A2 415 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 ZNF624Q9P2J8 865 aaPredicted RBP3.77□□□□□ -1.81
TDP1-217ENST00000557782 EXTL2Q9UBQ6 330 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 GMEB2Q9UKD1 530 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 CCPG1Q9ULG6 757 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 STRAPQ9Y3F4 350 aaKnown RBP3.77□□□□□ -1.81
TDP1-217ENST00000557782 WNT6Q9Y6F9 365 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 CLCA3PQ9Y6N3 262 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 NPHP3Q7Z494 1330 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 SALL3Q9BXA9 1300 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 A0A1W2PPM1 405 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 DPPA5A6NC42 116 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 TMEM8BA6NDV4 472 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 UBE2Q2LH0YL09 131 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 TTI1O43156 1089 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 HYAL3O43820 417 aaPredicted RBP3.76□□□□□ -1.81
TDP1-217ENST00000557782 SELENOFO60613 162 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 TSPAN1O60635 241 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 CREG1O75629 220 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 NEURL1O76050 574 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 MMP3P08254 477 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 AHCYP23526 432 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 HOXD9P28356 352 aaPredicted RBP3.76□□□□□ -1.81
TDP1-217ENST00000557782 CCT8P50990 548 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 LINC00310P59036 64 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 ADORA2A-AS1P86434 159 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 SPOCK1Q08629 439 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 PMPCAQ10713 525 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 IQCCQ4KMZ1 466 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 TIGD2Q4W5G0 525 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 KLHL26Q53HC5 615 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 LRRC73Q5JTD7 316 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.76□□□□□ -1.81
TDP1-217ENST00000557782 ABHD17BQ5VST6 288 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 TCERG1LQ5VWI1 586 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 HIST2H2BCQ6DN03 193 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 HIST2H2BDQ6DRA6 164 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 NEK5Q6P3R8 708 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 FAM198BQ6UWH4 519 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 ENPP7Q6UWV6 458 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 ISLR2Q6UXK2 745 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 TRIM72Q6ZMU5 477 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 RBM44Q6ZP01 1051 aaKnown RBP3.76□□□□□ -1.81
TDP1-217ENST00000557782 Q6ZSN1 163 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 TRAPPC11Q7Z392 1133 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 FAM219AQ8IW50 185 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 ARHGEF19Q8IW93 802 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 CCDC83Q8IWF9 413 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 ZDHHC23Q8IYP9 409 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 GALNT16Q8N428 558 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 ZNF276Q8N554 614 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 BBS10Q8TAM1 723 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 CAGE1Q8TC20 777 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 HM13Q8TCT9 377 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 UBLCP1Q8WVY7 318 aaPredicted RBP3.76□□□□□ -1.81
TDP1-217ENST00000557782 ASB10Q8WXI3 467 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 ADAMTS14Q8WXS8 1223 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 ST6GALNAC6Q969X2 333 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 LENG9Q96B70 501 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 Q96MF0 132 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 GDAP1L1Q96MZ0 367 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 KLHL5Q96PQ7 755 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 NAP1L3Q99457 506 aaPredicted RBP3.76□□□□□ -1.81
TDP1-217ENST00000557782 TXN2Q99757 166 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 PKP2Q99959 881 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 MOV10L1Q9BXT6 1211 aaKnown RBP3.76□□□□□ -1.81
TDP1-217ENST00000557782 TMEM39BQ9GZU3 492 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 HINT3Q9NQE9 182 aaKnown RBP3.76□□□□□ -1.81
TDP1-217ENST00000557782 DDX4Q9NQI0 724 aaKnown RBP3.76□□□□□ -1.81
TDP1-217ENST00000557782 KLHL1Q9NR64 748 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 SLC35D1Q9NTN3 355 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 DNAJC11Q9NVH1 559 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 DPP3Q9NY33 737 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 SPASTQ9UBP0 616 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 RAPGEFL1Q9UHV5 662 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 ANGPTL3Q9Y5C1 460 aa3.76□□□□□ -1.81
TDP1-217ENST00000557782 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.76□□□□□ -1.81
TDP1-217ENST00000557782 CLRN2A0PK11 232 aa3.75□□□□□ -1.81
TDP1-217ENST00000557782 H7C1Q1 480 aa3.75□□□□□ -1.81
TDP1-217ENST00000557782 CACNB4O00305 520 aaPredicted RBP3.75□□□□□ -1.81
TDP1-217ENST00000557782 RRHO14718 337 aa3.75□□□□□ -1.81
TDP1-217ENST00000557782 NDUFS4O43181 175 aa3.75□□□□□ -1.81
TDP1-217ENST00000557782 PALMO75781 387 aa3.75□□□□□ -1.81
TDP1-217ENST00000557782 RGS11O94810 467 aa3.75□□□□□ -1.81
TDP1-217ENST00000557782 APBB3O95704 486 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms