RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 GMNNO75496 209 aa11.72□□□□□ -0.53
VIPAS39-211ENST00000557658 RPP40O75818 363 aaKnown RBP11.72□□□□□ -0.53
VIPAS39-211ENST00000557658 RHOBTB1O94844 696 aa11.72□□□□□ -0.53
VIPAS39-211ENST00000557658 ANXA6P08133 673 aa11.72□□□□□ -0.53
VIPAS39-211ENST00000557658 JAK1P23458 1154 aa11.72□□□□□ -0.53
VIPAS39-211ENST00000557658 OCA2Q04671 838 aa11.72□□□□□ -0.53
VIPAS39-211ENST00000557658 PRKG2Q13237 762 aa11.72□□□□□ -0.53
VIPAS39-211ENST00000557658 SEMA3AQ14563 771 aa11.72□□□□□ -0.53
VIPAS39-211ENST00000557658 IHHQ14623 411 aa11.72□□□□□ -0.53
VIPAS39-211ENST00000557658 ZNF846Q147U1 533 aa11.72□□□□□ -0.53
VIPAS39-211ENST00000557658 TIGD5Q53EQ6 642 aa11.72□□□□□ -0.53
VIPAS39-211ENST00000557658 SYVN1Q86TM6 617 aa11.72□□□□□ -0.53
VIPAS39-211ENST00000557658 RALGPS2Q86X27 583 aaPredicted RBP11.72□□□□□ -0.53
VIPAS39-211ENST00000557658 TMCO5AQ8N6Q1 288 aa11.72□□□□□ -0.53
VIPAS39-211ENST00000557658 ABHD11Q8NFV4 315 aa11.72□□□□□ -0.53
VIPAS39-211ENST00000557658 OR4L1Q8NH43 312 aa11.72□□□□□ -0.53
VIPAS39-211ENST00000557658 BLOC1S5Q8TDH9 187 aa11.72□□□□□ -0.53
VIPAS39-211ENST00000557658 ISG20Q96AZ6 181 aaKnown RBP11.72□□□□□ -0.53
VIPAS39-211ENST00000557658 CCDC138Q96M89 665 aa11.72□□□□□ -0.53
VIPAS39-211ENST00000557658 TMLHEQ9NVH6 421 aa11.72□□□□□ -0.53
VIPAS39-211ENST00000557658 COMMD8Q9NX08 183 aa11.72□□□□□ -0.53
VIPAS39-211ENST00000557658 TTC36A6NLP5 189 aa11.71□□□□□ -0.53
VIPAS39-211ENST00000557658 TBC1D4O60343 1298 aa11.71□□□□□ -0.53
VIPAS39-211ENST00000557658 ECI2O75521 394 aa11.71□□□□□ -0.53
VIPAS39-211ENST00000557658 SOAT2O75908 522 aa11.71□□□□□ -0.53
VIPAS39-211ENST00000557658 ZBTB7AO95365 584 aa11.71□□□□□ -0.53
VIPAS39-211ENST00000557658 MLYCDO95822 493 aa11.71□□□□□ -0.53
VIPAS39-211ENST00000557658 HALP42357 657 aa11.71□□□□□ -0.53
VIPAS39-211ENST00000557658 MLLT10P55197 1068 aa11.71□□□□□ -0.53
VIPAS39-211ENST00000557658 GABARAPL2P60520 117 aa11.71□□□□□ -0.53
VIPAS39-211ENST00000557658 RAD51Q06609 339 aa11.71□□□□□ -0.53
VIPAS39-211ENST00000557658 RBBP7Q16576 425 aa11.71□□□□□ -0.53
VIPAS39-211ENST00000557658 CYP2A13Q16696 494 aa11.71□□□□□ -0.53
VIPAS39-211ENST00000557658 SLC2A7Q6PXP3 512 aa11.71□□□□□ -0.53
VIPAS39-211ENST00000557658 FRA10AC1Q70Z53 315 aa11.71□□□□□ -0.53
VIPAS39-211ENST00000557658 TFAP2DQ7Z6R9 452 aa11.71□□□□□ -0.53
VIPAS39-211ENST00000557658 ZFAND4Q86XD8 727 aa11.71□□□□□ -0.53
VIPAS39-211ENST00000557658 ZDHHC13Q8IUH4 622 aa11.71□□□□□ -0.53
VIPAS39-211ENST00000557658 TTC30BQ8N4P2 665 aa11.71□□□□□ -0.53
VIPAS39-211ENST00000557658 DPP10Q8N608 796 aa11.71□□□□□ -0.53
VIPAS39-211ENST00000557658 ZNF555Q8NEP9 628 aa11.71□□□□□ -0.53
VIPAS39-211ENST00000557658 SLC22A17Q8WUG5 538 aa11.71□□□□□ -0.53
VIPAS39-211ENST00000557658 C1orf74Q96LT6 269 aa11.71□□□□□ -0.53
VIPAS39-211ENST00000557658 TINF2Q9BSI4 451 aa11.71□□□□□ -0.53
VIPAS39-211ENST00000557658 TOR3AQ9H497 397 aa11.71□□□□□ -0.53
VIPAS39-211ENST00000557658 MIOSQ9NXC5 875 aa11.71□□□□□ -0.53
VIPAS39-211ENST00000557658 NUDT5Q9UKK9 219 aa11.71□□□□□ -0.53
VIPAS39-211ENST00000557658 PDE10AQ9Y233 779 aa11.71□□□□□ -0.53
VIPAS39-211ENST00000557658 DOCK4Q8N1I0 1966 aa11.71□□□□□ -0.54
VIPAS39-211ENST00000557658 LCHNA4D1U4 455 aa11.71□□□□□ -0.54
VIPAS39-211ENST00000557658 TRIM43BA6NCK2 446 aa11.71□□□□□ -0.54
VIPAS39-211ENST00000557658 CASTOR2A6NHX0 329 aa11.71□□□□□ -0.54
VIPAS39-211ENST00000557658 CLDN25C9JDP6 229 aa11.71□□□□□ -0.54
VIPAS39-211ENST00000557658 STX16O14662 325 aa11.71□□□□□ -0.54
VIPAS39-211ENST00000557658 HAPLN1P10915 354 aaPredicted RBP11.71□□□□□ -0.54
VIPAS39-211ENST00000557658 TCF3P15923 654 aa11.71□□□□□ -0.54
VIPAS39-211ENST00000557658 IL7RP16871 459 aa11.71□□□□□ -0.54
VIPAS39-211ENST00000557658 RHOQP17081 205 aa11.71□□□□□ -0.54
VIPAS39-211ENST00000557658 IL12AP29459 219 aa11.71□□□□□ -0.54
VIPAS39-211ENST00000557658 PRDX3P30048 256 aaKnown RBP11.71□□□□□ -0.54
VIPAS39-211ENST00000557658 RPL9P32969 192 aaKnown RBP11.71□□□□□ -0.54
VIPAS39-211ENST00000557658 MTHFRP42898 656 aa11.71□□□□□ -0.54
VIPAS39-211ENST00000557658 PSEN2P49810 448 aa11.71□□□□□ -0.54
VIPAS39-211ENST00000557658 AFF1P51825 1210 aaKnown RBP11.71□□□□□ -0.54
VIPAS39-211ENST00000557658 STC1P52823 247 aa11.71□□□□□ -0.54
VIPAS39-211ENST00000557658 PTPRCAPQ14761 206 aa11.71□□□□□ -0.54
VIPAS39-211ENST00000557658 TSNQ15631 228 aaKnown RBP11.71□□□□□ -0.54
VIPAS39-211ENST00000557658 FBXO48Q5FWF7 155 aa11.71□□□□□ -0.54
VIPAS39-211ENST00000557658 PIK3R6Q5UE93 754 aa11.71□□□□□ -0.54
VIPAS39-211ENST00000557658 MSANTD2Q6P1R3 559 aa11.71□□□□□ -0.54
VIPAS39-211ENST00000557658 TXNDC11Q6PKC3 985 aa11.71□□□□□ -0.54
VIPAS39-211ENST00000557658 PAQR3Q6TCH7 311 aa11.71□□□□□ -0.54
VIPAS39-211ENST00000557658 CRTC3Q6UUV7 619 aa11.71□□□□□ -0.54
VIPAS39-211ENST00000557658 SCIMPQ6UWF3 145 aa11.71□□□□□ -0.54
VIPAS39-211ENST00000557658 DTWD1Q8N5C7 304 aa11.71□□□□□ -0.54
VIPAS39-211ENST00000557658 AADATQ8N5Z0 425 aa11.71□□□□□ -0.54
VIPAS39-211ENST00000557658 TEX26Q8N6G2 289 aa11.71□□□□□ -0.54
VIPAS39-211ENST00000557658 FNDC5Q8NAU1 212 aa11.71□□□□□ -0.54
VIPAS39-211ENST00000557658 ARRDC2Q8TBH0 407 aa11.71□□□□□ -0.54
VIPAS39-211ENST00000557658 TADA1Q96BN2 335 aa11.71□□□□□ -0.54
VIPAS39-211ENST00000557658 ABHD8Q96I13 439 aa11.71□□□□□ -0.54
VIPAS39-211ENST00000557658 SERPINB11Q96P15 392 aa11.71□□□□□ -0.54
VIPAS39-211ENST00000557658 HGH1Q9BTY7 390 aa11.71□□□□□ -0.54
VIPAS39-211ENST00000557658 C1QTNF3Q9BXJ4 246 aa11.71□□□□□ -0.54
VIPAS39-211ENST00000557658 HMG20AQ9NP66 347 aa11.71□□□□□ -0.54
VIPAS39-211ENST00000557658 ATAD3AQ9NVI7 634 aa11.71□□□□□ -0.54
VIPAS39-211ENST00000557658 TAS2R13Q9NYV9 303 aa11.71□□□□□ -0.54
VIPAS39-211ENST00000557658 ITGB1BP2Q9UKP3 347 aa11.71□□□□□ -0.54
VIPAS39-211ENST00000557658 SNX5Q9Y5X3 404 aa11.71□□□□□ -0.54
VIPAS39-211ENST00000557658 ARL5AQ9Y689 179 aa11.71□□□□□ -0.54
VIPAS39-211ENST00000557658 UBA6A0AVT1 1052 aaPredicted RBP11.7□□□□□ -0.54
VIPAS39-211ENST00000557658 G3V2T6 193 aa11.7□□□□□ -0.54
VIPAS39-211ENST00000557658 ALDH2P05091 517 aa11.7□□□□□ -0.54
VIPAS39-211ENST00000557658 FGF1P05230 155 aa11.7□□□□□ -0.54
VIPAS39-211ENST00000557658 PCNAP12004 261 aa11.7□□□□□ -0.54
VIPAS39-211ENST00000557658 HLA-DPA1P20036 260 aa11.7□□□□□ -0.54
VIPAS39-211ENST00000557658 OXCT1P55809 520 aa11.7□□□□□ -0.54
VIPAS39-211ENST00000557658 TOP3AQ13472 1001 aaPredicted RBP11.7□□□□□ -0.54
VIPAS39-211ENST00000557658 C6orf136Q5SQH8 315 aa11.7□□□□□ -0.54
VIPAS39-211ENST00000557658 C6orf141Q5SZD1 244 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms