RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 SLC2A7Q6PXP3 512 aa15.18■□□□□ 0.02
TMEM55B-207ENST00000557041 FAM110BQ8TC76 370 aa15.18■□□□□ 0.02
TMEM55B-207ENST00000557041 SDCCAG3Q96C92 435 aa15.18■□□□□ 0.02
TMEM55B-207ENST00000557041 MPP4Q96JB8 637 aa15.18■□□□□ 0.02
TMEM55B-207ENST00000557041 HIST1H2AHQ96KK5 128 aa15.18■□□□□ 0.02
TMEM55B-207ENST00000557041 HIST1H2AJQ99878 128 aa15.18■□□□□ 0.02
TMEM55B-207ENST00000557041 DCUN1D5Q9BTE7 237 aa15.18■□□□□ 0.02
TMEM55B-207ENST00000557041 H2AFJQ9BTM1 129 aa15.18■□□□□ 0.02
TMEM55B-207ENST00000557041 TDRD1Q9BXT4 1180 aaKnown RBP15.18■□□□□ 0.02
TMEM55B-207ENST00000557041 ATG10Q9H0Y0 220 aa15.18■□□□□ 0.02
TMEM55B-207ENST00000557041 ARNT2Q9HBZ2 717 aa15.18■□□□□ 0.02
TMEM55B-207ENST00000557041 OPTCQ9UBM4 332 aa15.18■□□□□ 0.02
TMEM55B-207ENST00000557041 F5P12259 2224 aa15.18■□□□□ 0.02
TMEM55B-207ENST00000557041 ARHGAP10A1A4S6 786 aa15.18■□□□□ 0.02
TMEM55B-207ENST00000557041 PAPSS2O95340 614 aaPredicted RBP15.18■□□□□ 0.02
TMEM55B-207ENST00000557041 TM4SF4P48230 202 aa15.18■□□□□ 0.02
TMEM55B-207ENST00000557041 HTR6P50406 440 aa15.18■□□□□ 0.02
TMEM55B-207ENST00000557041 DNAJB13P59910 316 aa15.18■□□□□ 0.02
TMEM55B-207ENST00000557041 SLC44A4Q53GD3 710 aa15.18■□□□□ 0.02
TMEM55B-207ENST00000557041 AP1ARQ63HQ0 302 aa15.18■□□□□ 0.02
TMEM55B-207ENST00000557041 BEND5Q7L4P6 421 aa15.18■□□□□ 0.02
TMEM55B-207ENST00000557041 SYVN1Q86TM6 617 aa15.18■□□□□ 0.02
TMEM55B-207ENST00000557041 FIBCD1Q8N539 461 aa15.18■□□□□ 0.02
TMEM55B-207ENST00000557041 GATA6Q92908 595 aa15.18■□□□□ 0.02
TMEM55B-207ENST00000557041 TSSK3Q96PN8 268 aa15.18■□□□□ 0.02
TMEM55B-207ENST00000557041 PHF12Q96QT6 1004 aa15.18■□□□□ 0.02
TMEM55B-207ENST00000557041 CDK5RAP1Q96SZ6 601 aaKnown RBP15.18■□□□□ 0.02
TMEM55B-207ENST00000557041 USP22Q9UPT9 525 aa15.18■□□□□ 0.02
TMEM55B-207ENST00000557041 FAM155AB1AL88 458 aaPredicted RBP15.18■□□□□ 0.02
TMEM55B-207ENST00000557041 RAD51BO15315 384 aa15.18■□□□□ 0.02
TMEM55B-207ENST00000557041 KDELR3O43731 214 aa15.18■□□□□ 0.02
TMEM55B-207ENST00000557041 BCAS2O75934 225 aaPredicted RBP15.18■□□□□ 0.02
TMEM55B-207ENST00000557041 ITPKAP23677 461 aa15.18■□□□□ 0.02
TMEM55B-207ENST00000557041 HALP42357 657 aa15.18■□□□□ 0.02
TMEM55B-207ENST00000557041 ATP6V0D1P61421 351 aa15.18■□□□□ 0.02
TMEM55B-207ENST00000557041 COL9A2Q14055 689 aaPredicted RBP15.18■□□□□ 0.02
TMEM55B-207ENST00000557041 TGFBIQ15582 683 aa15.18■□□□□ 0.02
TMEM55B-207ENST00000557041 SLC5A9Q2M3M2 681 aa15.18■□□□□ 0.02
TMEM55B-207ENST00000557041 RETREG3Q86VR2 466 aa15.18■□□□□ 0.02
TMEM55B-207ENST00000557041 CPSF7Q8N684 471 aaKnown RBP15.18■□□□□ 0.02
TMEM55B-207ENST00000557041 ABCB8Q9NUT2 735 aa15.18■□□□□ 0.02
TMEM55B-207ENST00000557041 HECAQ9UBI9 543 aaPredicted RBP15.18■□□□□ 0.02
TMEM55B-207ENST00000557041 SIP14410 1827 aa15.17■□□□□ 0.02
TMEM55B-207ENST00000557041 LOC285556D6RIA3 1793 aa15.17■□□□□ 0.02
TMEM55B-207ENST00000557041 ILVBLA1L0T0 632 aa15.17■□□□□ 0.02
TMEM55B-207ENST00000557041 MROH6A6NGR9 719 aa15.17■□□□□ 0.02
TMEM55B-207ENST00000557041 NEDD8-MDP1E9PL57 170 aa15.17■□□□□ 0.02
TMEM55B-207ENST00000557041 CASQ2O14958 399 aaPredicted RBP15.17■□□□□ 0.02
TMEM55B-207ENST00000557041 INPPL1O15357 1258 aa15.17■□□□□ 0.02
TMEM55B-207ENST00000557041 SH3BP5O60239 455 aa15.17■□□□□ 0.02
TMEM55B-207ENST00000557041 KERAO60938 352 aa15.17■□□□□ 0.02
TMEM55B-207ENST00000557041 FDXRP22570 491 aa15.17■□□□□ 0.02
TMEM55B-207ENST00000557041 PAX3P23760 479 aa15.17■□□□□ 0.02
TMEM55B-207ENST00000557041 LIPEQ05469 1076 aa15.17■□□□□ 0.02
TMEM55B-207ENST00000557041 ARHGEF6Q15052 776 aa15.17■□□□□ 0.02
TMEM55B-207ENST00000557041 CRY1Q16526 586 aa15.17■□□□□ 0.02
TMEM55B-207ENST00000557041 STK32CQ86UX6 486 aa15.17■□□□□ 0.02
TMEM55B-207ENST00000557041 ELMOD1Q8N336 334 aa15.17■□□□□ 0.02
TMEM55B-207ENST00000557041 DLG3Q92796 817 aa15.17■□□□□ 0.02
TMEM55B-207ENST00000557041 LIN7AO14910 233 aaPredicted RBP15.17■□□□□ 0.02
TMEM55B-207ENST00000557041 NEK2P51955 445 aa15.17■□□□□ 0.02
TMEM55B-207ENST00000557041 GCNT7Q6ZNI0 430 aa15.17■□□□□ 0.02
TMEM55B-207ENST00000557041 TSPAN33Q86UF1 283 aa15.17■□□□□ 0.02
TMEM55B-207ENST00000557041 WFDC5Q8TCV5 224 aa15.17■□□□□ 0.02
TMEM55B-207ENST00000557041 KIAA1191Q96A73 305 aa15.17■□□□□ 0.02
TMEM55B-207ENST00000557041 FUBP1Q96AE4 644 aaKnown RBP15.17■□□□□ 0.02
TMEM55B-207ENST00000557041 ASB9Q96DX5 294 aa15.17■□□□□ 0.02
TMEM55B-207ENST00000557041 IGSF21Q96ID5 467 aa15.17■□□□□ 0.02
TMEM55B-207ENST00000557041 FEM1AQ9BSK4 669 aa15.17■□□□□ 0.02
TMEM55B-207ENST00000557041 SPATA16Q9BXB7 569 aa15.17■□□□□ 0.02
TMEM55B-207ENST00000557041 DPY30Q9C005 99 aa15.17■□□□□ 0.02
TMEM55B-207ENST00000557041 LIMD1Q9UGP4 676 aa15.17■□□□□ 0.02
TMEM55B-207ENST00000557041 IKZF3Q9UKT9 509 aa15.17■□□□□ 0.02
TMEM55B-207ENST00000557041 ZNF711Q9Y462 761 aa15.17■□□□□ 0.02
TMEM55B-207ENST00000557041 ASB1Q9Y576 335 aa15.17■□□□□ 0.02
TMEM55B-207ENST00000557041 H3BNX3 289 aa15.16■□□□□ 0.02
TMEM55B-207ENST00000557041 CACNG3O60359 315 aa15.16■□□□□ 0.02
TMEM55B-207ENST00000557041 HK2P52789 917 aa15.16■□□□□ 0.02
TMEM55B-207ENST00000557041 CDKL1Q00532 357 aa15.16■□□□□ 0.02
TMEM55B-207ENST00000557041 PRKG2Q13237 762 aa15.16■□□□□ 0.02
TMEM55B-207ENST00000557041 CBX2Q14781 532 aaPredicted RBP15.16■□□□□ 0.02
TMEM55B-207ENST00000557041 CHRNA6Q15825 494 aa15.16■□□□□ 0.02
TMEM55B-207ENST00000557041 AAK1Q2M2I8 961 aa15.16■□□□□ 0.02
TMEM55B-207ENST00000557041 TMEM214Q6NUQ4 689 aaKnown RBP15.16■□□□□ 0.02
TMEM55B-207ENST00000557041 ZNF296Q8WUU4 475 aaPredicted RBP15.16■□□□□ 0.02
TMEM55B-207ENST00000557041 MED8Q96G25 268 aa15.16■□□□□ 0.02
TMEM55B-207ENST00000557041 CLSTN3Q9BQT9 956 aa15.16■□□□□ 0.02
TMEM55B-207ENST00000557041 TFB2MQ9H5Q4 396 aaKnown RBP15.16■□□□□ 0.02
TMEM55B-207ENST00000557041 MEAF6Q9HAF1 191 aa15.16■□□□□ 0.02
TMEM55B-207ENST00000557041 INTS7Q9NVH2 962 aaKnown RBP15.16■□□□□ 0.02
TMEM55B-207ENST00000557041 NLE1Q9NVX2 485 aaPredicted RBP15.16■□□□□ 0.02
TMEM55B-207ENST00000557041 OR2AG2A6NM03 316 aa15.16■□□□□ 0.02
TMEM55B-207ENST00000557041 IDO1P14902 403 aa15.16■□□□□ 0.02
TMEM55B-207ENST00000557041 OGNP20774 298 aaKnown RBP15.16■□□□□ 0.02
TMEM55B-207ENST00000557041 POLR2JP52435 117 aaKnown RBP15.16■□□□□ 0.02
TMEM55B-207ENST00000557041 ESRRGP62508 458 aa15.16■□□□□ 0.02
TMEM55B-207ENST00000557041 PTGR1Q14914 329 aa15.16■□□□□ 0.02
TMEM55B-207ENST00000557041 TRIM60Q495X7 471 aa15.16■□□□□ 0.02
TMEM55B-207ENST00000557041 BBS7Q8IWZ6 715 aa15.16■□□□□ 0.02
TMEM55B-207ENST00000557041 FAM162AQ96A26 154 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms