RNA–Protein interactions for RNA: ENST00000556744.1

MARK3-211, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 1,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-211ENST00000556744 KLHL8Q9P2G9 620 aaPredicted RBP9.41□□□□□ -0.9
MARK3-211ENST00000556744 APPL1Q9UKG1 709 aa9.41□□□□□ -0.9
MARK3-211ENST00000556744 PADI4Q9UM07 663 aa9.41□□□□□ -0.9
MARK3-211ENST00000556744 SUFUQ9UMX1 484 aa9.41□□□□□ -0.9
MARK3-211ENST00000556744 PACSIN2Q9UNF0 486 aaPredicted RBP9.41□□□□□ -0.9
MARK3-211ENST00000556744 ZNF711Q9Y462 761 aa9.41□□□□□ -0.9
MARK3-211ENST00000556744 SPO11Q9Y5K1 396 aa9.41□□□□□ -0.9
MARK3-211ENST00000556744 BPTFQ12830 3046 aa9.41□□□□□ -0.9
MARK3-211ENST00000556744 CELSR3Q9NYQ7 3312 aa9.41□□□□□ -0.9
MARK3-211ENST00000556744 TCRBV7S2A1N4TA0A589 114 aa9.4□□□□□ -0.9
MARK3-211ENST00000556744 FAM149AA5PLN7 773 aa9.4□□□□□ -0.9
MARK3-211ENST00000556744 GOLGA6L9A6NEM1 432 aa9.4□□□□□ -0.9
MARK3-211ENST00000556744 PRR19A6NJB7 356 aa9.4□□□□□ -0.9
MARK3-211ENST00000556744 GPR89AB7ZAQ6 455 aa9.4□□□□□ -0.9
MARK3-211ENST00000556744 TAF4O00268 1085 aa9.4□□□□□ -0.9
MARK3-211ENST00000556744 AURKAO14965 403 aa9.4□□□□□ -0.9
MARK3-211ENST00000556744 PPFIA2O75334 1257 aa9.4□□□□□ -0.9
MARK3-211ENST00000556744 TCEA3O75764 348 aa9.4□□□□□ -0.9
MARK3-211ENST00000556744 MT-CO3P00414 261 aa9.4□□□□□ -0.9
MARK3-211ENST00000556744 GHRHP01286 108 aa9.4□□□□□ -0.9
MARK3-211ENST00000556744 FGF1P05230 155 aa9.4□□□□□ -0.9
MARK3-211ENST00000556744 CCDC175P0C221 793 aa9.4□□□□□ -0.9
MARK3-211ENST00000556744 GPR89BP0CG08 455 aa9.4□□□□□ -0.9
MARK3-211ENST00000556744 ARAFP10398 606 aa9.4□□□□□ -0.9
MARK3-211ENST00000556744 JUPP14923 745 aa9.4□□□□□ -0.9
MARK3-211ENST00000556744 GLB1P16278 677 aa9.4□□□□□ -0.9
MARK3-211ENST00000556744 BPIP17213 487 aa9.4□□□□□ -0.9
MARK3-211ENST00000556744 ADCY8P40145 1251 aa9.4□□□□□ -0.9
MARK3-211ENST00000556744 MAP2K3P46734 347 aa9.4□□□□□ -0.9
MARK3-211ENST00000556744 POLD2P49005 469 aa9.4□□□□□ -0.9
MARK3-211ENST00000556744 CLCNKAP51800 687 aa9.4□□□□□ -0.9
MARK3-211ENST00000556744 GEMP55040 296 aa9.4□□□□□ -0.9
MARK3-211ENST00000556744 TARDBPQ13148 414 aaKnown RBP eCLIP9.4□□□□□ -0.94e-7■■■■■ 46.2
MARK3-211ENST00000556744 LRP8Q14114 963 aa9.4□□□□□ -0.9
MARK3-211ENST00000556744 HLTFQ14527 1009 aaKnown RBP eCLIP9.4□□□□□ -0.9
MARK3-211ENST00000556744 NR1D2Q14995 579 aa9.4□□□□□ -0.9
MARK3-211ENST00000556744 OASLQ15646 514 aaKnown RBP9.4□□□□□ -0.9
MARK3-211ENST00000556744 PERM1Q5SV97 790 aa9.4□□□□□ -0.9
MARK3-211ENST00000556744 CERCAMQ5T4B2 595 aa9.4□□□□□ -0.9
MARK3-211ENST00000556744 CCDC181Q5TID7 509 aa9.4□□□□□ -0.9
MARK3-211ENST00000556744 ZDHHC20Q5W0Z9 365 aa9.4□□□□□ -0.9
MARK3-211ENST00000556744 KCTD11Q693B1 232 aa9.4□□□□□ -0.9
MARK3-211ENST00000556744 ITPRIPL1Q6GPH6 555 aa9.4□□□□□ -0.9
MARK3-211ENST00000556744 DENND5AQ6IQ26 1287 aa9.4□□□□□ -0.9
MARK3-211ENST00000556744 DARS2Q6PI48 645 aaKnown RBP9.4□□□□□ -0.9
MARK3-211ENST00000556744 EFL1Q7Z2Z2 1120 aaKnown RBP9.4□□□□□ -0.9
MARK3-211ENST00000556744 RD3Q7Z3Z2 195 aa9.4□□□□□ -0.9
MARK3-211ENST00000556744 KDELC2Q7Z4H8 507 aa9.4□□□□□ -0.9
MARK3-211ENST00000556744 PROSER1Q86XN7 944 aa9.4□□□□□ -0.9
MARK3-211ENST00000556744 MARCH9Q86YJ5 346 aa9.4□□□□□ -0.9
MARK3-211ENST00000556744 CCNJLQ8IV13 435 aa9.4□□□□□ -0.9
MARK3-211ENST00000556744 CCL4L1Q8NHW4 92 aa9.4□□□□□ -0.9
MARK3-211ENST00000556744 VPS35Q96QK1 796 aa9.4□□□□□ -0.9
MARK3-211ENST00000556744 FERMT1Q9BQL6 677 aa9.4□□□□□ -0.9
MARK3-211ENST00000556744 CARS2Q9HA77 564 aaKnown RBP9.4□□□□□ -0.9
MARK3-211ENST00000556744 GRPEL1Q9HAV7 217 aa9.4□□□□□ -0.9
MARK3-211ENST00000556744 TRIM39Q9HCM9 518 aa9.4□□□□□ -0.9
MARK3-211ENST00000556744 SPATS2LQ9NUQ6 558 aaKnown RBP9.4□□□□□ -0.9
MARK3-211ENST00000556744 DNAJB12Q9NXW2 375 aaKnown RBP9.4□□□□□ -0.9
MARK3-211ENST00000556744 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.4□□□□□ -0.9
MARK3-211ENST00000556744 RSPH14Q9UHP6 348 aa9.4□□□□□ -0.9
MARK3-211ENST00000556744 TMPRSS11EQ9UL52 423 aa9.4□□□□□ -0.9
MARK3-211ENST00000556744 GUCA1BQ9UMX6 200 aa9.4□□□□□ -0.9
MARK3-211ENST00000556744 GPR34Q9UPC5 381 aa9.4□□□□□ -0.9
MARK3-211ENST00000556744 SHOC2Q9UQ13 582 aa9.4□□□□□ -0.9
MARK3-211ENST00000556744 CLCA2Q9UQC9 943 aa9.4□□□□□ -0.9
MARK3-211ENST00000556744 R3HDM2Q9Y2K5 976 aaKnown RBP9.4□□□□□ -0.9
MARK3-211ENST00000556744 AAR2Q9Y312 384 aaKnown RBP9.4□□□□□ -0.9
MARK3-211ENST00000556744 OAS3Q9Y6K5 1087 aaKnown RBP9.4□□□□□ -0.9
MARK3-211ENST00000556744 ZFHX4Q86UP3 3567 aa9.4□□□□□ -0.91
MARK3-211ENST00000556744 ZFYVE26Q68DK2 2539 aa9.4□□□□□ -0.91
MARK3-211ENST00000556744 TMEM238LA0A1B0GVL6 79 aa9.39□□□□□ -0.91
MARK3-211ENST00000556744 CPED1A4D0V7 1026 aa9.39□□□□□ -0.91
MARK3-211ENST00000556744 GAPDHSO14556 408 aaPredicted RBP9.39□□□□□ -0.91
MARK3-211ENST00000556744 CHUKO15111 745 aa9.39□□□□□ -0.91
MARK3-211ENST00000556744 KCNN4O15554 427 aa9.39□□□□□ -0.91
MARK3-211ENST00000556744 NUDT21O43809 227 aaKnown RBP9.39□□□□□ -0.91
MARK3-211ENST00000556744 NUAK1O60285 661 aa9.39□□□□□ -0.91
MARK3-211ENST00000556744 AGTP01019 485 aa9.39□□□□□ -0.91
MARK3-211ENST00000556744 PIRTP0C851 137 aa9.39□□□□□ -0.91
MARK3-211ENST00000556744 PSMA3P25788 255 aa9.39□□□□□ -0.91
MARK3-211ENST00000556744 ADH6P28332 368 aa9.39□□□□□ -0.91
MARK3-211ENST00000556744 STIP1P31948 543 aaKnown RBP9.39□□□□□ -0.91
MARK3-211ENST00000556744 CHRNA4P43681 627 aa9.39□□□□□ -0.91
MARK3-211ENST00000556744 CLDN6P56747 220 aa9.39□□□□□ -0.91
MARK3-211ENST00000556744 ILF3Q12906 894 aaKnown RBP eCLIP9.39□□□□□ -0.913e-10■■■■□ 20.1
MARK3-211ENST00000556744 SQSTM1Q13501 440 aa9.39□□□□□ -0.91
MARK3-211ENST00000556744 PEX6Q13608 980 aa9.39□□□□□ -0.91
MARK3-211ENST00000556744 SIX1Q15475 284 aaPredicted RBP9.39□□□□□ -0.91
MARK3-211ENST00000556744 ST3GAL2Q16842 350 aa9.39□□□□□ -0.91
MARK3-211ENST00000556744 PARP6Q2NL67 630 aa9.39□□□□□ -0.91
MARK3-211ENST00000556744 C14orf28Q4W4Y0 310 aa9.39□□□□□ -0.91
MARK3-211ENST00000556744 IGF2-ASQ6U949 168 aa9.39□□□□□ -0.91
MARK3-211ENST00000556744 TAF8Q7Z7C8 310 aa9.39□□□□□ -0.91
MARK3-211ENST00000556744 SLC13A5Q86YT5 568 aaPredicted RBP9.39□□□□□ -0.91
MARK3-211ENST00000556744 TMEM102Q8N9M5 508 aaPredicted RBP9.39□□□□□ -0.91
MARK3-211ENST00000556744 KYQ8NBH2 561 aa9.39□□□□□ -0.91
MARK3-211ENST00000556744 FAM46DQ8NEK8 389 aa9.39□□□□□ -0.91
MARK3-211ENST00000556744 CCDC110Q8TBZ0 833 aa9.39□□□□□ -0.91
MARK3-211ENST00000556744 MAPK15Q8TD08 544 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms