RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 MUC6Q6W4X9 2439 aa13.87□□□□□ -0.19
VIPAS39-208ENST00000556412 TCRBV9S1A1TA0A576 114 aa13.87□□□□□ -0.19
VIPAS39-208ENST00000556412 H3BM21 787 aa13.87□□□□□ -0.19
VIPAS39-208ENST00000556412 TNFRSF10CO14798 259 aa13.87□□□□□ -0.19
VIPAS39-208ENST00000556412 GRID2O43424 1007 aa13.87□□□□□ -0.19
VIPAS39-208ENST00000556412 NUAK1O60285 661 aa13.87□□□□□ -0.19
VIPAS39-208ENST00000556412 CER1O95813 267 aa13.87□□□□□ -0.19
VIPAS39-208ENST00000556412 FUCA1P04066 466 aa13.87□□□□□ -0.19
VIPAS39-208ENST00000556412 CSF2P04141 144 aa13.87□□□□□ -0.19
VIPAS39-208ENST00000556412 PBLDP30039 288 aaPredicted RBP13.87□□□□□ -0.19
VIPAS39-208ENST00000556412 BLKP51451 505 aa13.87□□□□□ -0.19
VIPAS39-208ENST00000556412 HK3P52790 923 aa13.87□□□□□ -0.19
VIPAS39-208ENST00000556412 PMS2P54278 862 aa13.87□□□□□ -0.19
VIPAS39-208ENST00000556412 MPP1Q00013 466 aa13.87□□□□□ -0.19
VIPAS39-208ENST00000556412 C1orf61Q13536 156 aa13.87□□□□□ -0.19
VIPAS39-208ENST00000556412 PRRT3Q5FWE3 981 aa13.87□□□□□ -0.19
VIPAS39-208ENST00000556412 UBAP2Q5T6F2 1119 aaKnown RBP13.87□□□□□ -0.19
VIPAS39-208ENST00000556412 WDR93Q6P2C0 686 aa13.87□□□□□ -0.19
VIPAS39-208ENST00000556412 CHST15Q7LFX5 561 aaPredicted RBP13.87□□□□□ -0.19
VIPAS39-208ENST00000556412 CILP2Q8IUL8 1156 aa13.87□□□□□ -0.19
VIPAS39-208ENST00000556412 OXR1Q8N573 874 aa13.87□□□□□ -0.19
VIPAS39-208ENST00000556412 MINDY1Q8N5J2 469 aa13.87□□□□□ -0.19
VIPAS39-208ENST00000556412 GPR150Q8NGU9 434 aa13.87□□□□□ -0.19
VIPAS39-208ENST00000556412 UHMK1Q8TAS1 419 aaKnown RBP13.87□□□□□ -0.19
VIPAS39-208ENST00000556412 HEXDCQ8WVB3 486 aa13.87□□□□□ -0.19
VIPAS39-208ENST00000556412 EDEM2Q9BV94 578 aa13.87□□□□□ -0.19
VIPAS39-208ENST00000556412 FAM8A1Q9UBU6 413 aa13.87□□□□□ -0.19
VIPAS39-208ENST00000556412 PCYT1BQ9Y5K3 369 aaPredicted RBP13.87□□□□□ -0.19
VIPAS39-208ENST00000556412 VPS13AQ96RL7 3174 aa13.86□□□□□ -0.19
VIPAS39-208ENST00000556412 CACNA1HO95180 2353 aa13.86□□□□□ -0.19
VIPAS39-208ENST00000556412 DNAJC6O75061 913 aa13.86□□□□□ -0.19
VIPAS39-208ENST00000556412 LRP3O75074 770 aa13.86□□□□□ -0.19
VIPAS39-208ENST00000556412 IVLP07476 585 aa13.86□□□□□ -0.19
VIPAS39-208ENST00000556412 GSTA2P09210 222 aa13.86□□□□□ -0.19
VIPAS39-208ENST00000556412 ACP5P13686 325 aa13.86□□□□□ -0.19
VIPAS39-208ENST00000556412 ATP1B2P14415 290 aaPredicted RBP13.86□□□□□ -0.19
VIPAS39-208ENST00000556412 NME1P15531 152 aaKnown RBP13.86□□□□□ -0.19
VIPAS39-208ENST00000556412 ZNF7P17097 686 aaPredicted RBP13.86□□□□□ -0.19
VIPAS39-208ENST00000556412 OGNP20774 298 aaKnown RBP13.86□□□□□ -0.19
VIPAS39-208ENST00000556412 STX2P32856 288 aa13.86□□□□□ -0.19
VIPAS39-208ENST00000556412 PHBP35232 272 aa13.86□□□□□ -0.19
VIPAS39-208ENST00000556412 NSG1P42857 185 aa13.86□□□□□ -0.19
VIPAS39-208ENST00000556412 CTSCP53634 463 aa13.86□□□□□ -0.19
VIPAS39-208ENST00000556412 EIF3BP55884 814 aaKnown RBP13.86□□□□□ -0.19
VIPAS39-208ENST00000556412 ITIH4Q14624 930 aa13.86□□□□□ -0.19
VIPAS39-208ENST00000556412 RNF187Q5TA31 235 aaPredicted RBP13.86□□□□□ -0.19
VIPAS39-208ENST00000556412 TMEM220Q6QAJ8 160 aa13.86□□□□□ -0.19
VIPAS39-208ENST00000556412 LRRTM4Q86VH4 590 aa13.86□□□□□ -0.19
VIPAS39-208ENST00000556412 RELL1Q8IUW5 271 aa13.86□□□□□ -0.19
VIPAS39-208ENST00000556412 CTAGE3PQ8IX95 158 aa13.86□□□□□ -0.19
VIPAS39-208ENST00000556412 BEND7Q8N7W2 519 aaPredicted RBP13.86□□□□□ -0.19
VIPAS39-208ENST00000556412 LMX1AQ8TE12 382 aa13.86□□□□□ -0.19
VIPAS39-208ENST00000556412 FBF1Q8TES7 1133 aa13.86□□□□□ -0.19
VIPAS39-208ENST00000556412 CDKL2Q92772 493 aa13.86□□□□□ -0.19
VIPAS39-208ENST00000556412 OR2M4Q96R27 311 aa13.86□□□□□ -0.19
VIPAS39-208ENST00000556412 CLPBQ9H078 707 aa13.86□□□□□ -0.19
VIPAS39-208ENST00000556412 ERVMER34-1Q9H9K5 563 aa13.86□□□□□ -0.19
VIPAS39-208ENST00000556412 TM7SF3Q9NS93 570 aa13.86□□□□□ -0.19
VIPAS39-208ENST00000556412 RXFP3Q9NSD7 469 aa13.86□□□□□ -0.19
VIPAS39-208ENST00000556412 FBXO5Q9UKT4 447 aa13.86□□□□□ -0.19
VIPAS39-208ENST00000556412 CRYL1Q9Y2S2 319 aa13.86□□□□□ -0.19
VIPAS39-208ENST00000556412 THADAQ6YHU6 1953 aa13.86□□□□□ -0.19
VIPAS39-208ENST00000556412 SPAG6O75602 509 aa13.85□□□□□ -0.19
VIPAS39-208ENST00000556412 ABCG1P45844 678 aa13.85□□□□□ -0.19
VIPAS39-208ENST00000556412 CCT8P50990 548 aa13.85□□□□□ -0.19
VIPAS39-208ENST00000556412 HNRNPKP61978 463 aaKnown RBP eCLIP13.85□□□□□ -0.19
VIPAS39-208ENST00000556412 INSCQ1MX18 579 aa13.85□□□□□ -0.19
VIPAS39-208ENST00000556412 TYSND1Q2T9J0 566 aa13.85□□□□□ -0.19
VIPAS39-208ENST00000556412 PYCR3Q53H96 274 aa13.85□□□□□ -0.19
VIPAS39-208ENST00000556412 TEDDM1Q5T9Z0 273 aa13.85□□□□□ -0.19
VIPAS39-208ENST00000556412 PRR23CQ6ZRP0 262 aa13.85□□□□□ -0.19
VIPAS39-208ENST00000556412 LMNTD2Q8IXW0 634 aa13.85□□□□□ -0.19
VIPAS39-208ENST00000556412 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.85□□□□□ -0.19
VIPAS39-208ENST00000556412 MRRFQ96E11 262 aaKnown RBP13.85□□□□□ -0.19
VIPAS39-208ENST00000556412 TMEM168Q9H0V1 697 aa13.85□□□□□ -0.19
VIPAS39-208ENST00000556412 RMI1Q9H9A7 625 aa13.85□□□□□ -0.19
VIPAS39-208ENST00000556412 MOCS1Q9NZB8 636 aa13.85□□□□□ -0.19
VIPAS39-208ENST00000556412 DNAJC16Q9Y2G8 782 aa13.85□□□□□ -0.19
VIPAS39-208ENST00000556412 PLEKHM1Q9Y4G2 1056 aa13.85□□□□□ -0.19
VIPAS39-208ENST00000556412 PRSS21Q9Y6M0 314 aa13.85□□□□□ -0.19
VIPAS39-208ENST00000556412 DGKBQ9Y6T7 804 aa13.85□□□□□ -0.19
VIPAS39-208ENST00000556412 PLXNA2O75051 1894 aa13.85□□□□□ -0.19
VIPAS39-208ENST00000556412 USP34Q70CQ2 3546 aa13.85□□□□□ -0.19
VIPAS39-208ENST00000556412 TRPM6Q9BX84 2022 aa13.85□□□□□ -0.19
VIPAS39-208ENST00000556412 IGLV3-16A0A075B6K0 115 aa13.85□□□□□ -0.19
VIPAS39-208ENST00000556412 A0A1B0GTQ1 180 aa13.85□□□□□ -0.19
VIPAS39-208ENST00000556412 GPR89AB7ZAQ6 455 aa13.85□□□□□ -0.19
VIPAS39-208ENST00000556412 GFRA3O60609 400 aa13.85□□□□□ -0.19
VIPAS39-208ENST00000556412 CELA2BP08218 269 aaPredicted RBP13.85□□□□□ -0.19
VIPAS39-208ENST00000556412 GPR89BP0CG08 455 aa13.85□□□□□ -0.19
VIPAS39-208ENST00000556412 ITGB6P18564 788 aa13.85□□□□□ -0.19
VIPAS39-208ENST00000556412 FMO4P31512 558 aa13.85□□□□□ -0.19
VIPAS39-208ENST00000556412 BNIP3Q12983 259 aa13.85□□□□□ -0.19
VIPAS39-208ENST00000556412 FRG1Q14331 258 aaKnown RBP13.85□□□□□ -0.19
VIPAS39-208ENST00000556412 EFTUD2Q15029 972 aaKnown RBP eCLIP13.85□□□□□ -0.19
VIPAS39-208ENST00000556412 ZNF423Q2M1K9 1284 aa13.85□□□□□ -0.19
VIPAS39-208ENST00000556412 ZNF789Q5FWF6 425 aa13.85□□□□□ -0.19
VIPAS39-208ENST00000556412 PTRHD1Q6GMV3 140 aaKnown RBP13.85□□□□□ -0.19
VIPAS39-208ENST00000556412 PACS1Q6VY07 963 aa13.85□□□□□ -0.19
VIPAS39-208ENST00000556412 GATAD2AQ86YP4 633 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms