RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 IARS2Q9NSE4 1012 aaKnown RBP6.82□□□□□ -1.32
SLIRP-204ENST00000555890 FRRS1LQ9P0K9 344 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 CFAP97Q9P2B7 532 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 GRID1Q9ULK0 1009 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 NUMBLQ9Y6R0 609 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 JMJD1CQ15652 2540 aa6.81□□□□□ -1.32
SLIRP-204ENST00000555890 E2F8A0AVK6 867 aa6.81□□□□□ -1.32
SLIRP-204ENST00000555890 TNFRSF10CO14798 259 aa6.81□□□□□ -1.32
SLIRP-204ENST00000555890 BIRC5O15392 142 aa6.81□□□□□ -1.32
SLIRP-204ENST00000555890 CCL16O15467 120 aa6.81□□□□□ -1.32
SLIRP-204ENST00000555890 GLRA3O75311 464 aa6.81□□□□□ -1.32
SLIRP-204ENST00000555890 VAPBO95292 243 aa6.81□□□□□ -1.32
SLIRP-204ENST00000555890 NDST3O95803 873 aa6.81□□□□□ -1.32
SLIRP-204ENST00000555890 MMP2P08253 660 aa6.81□□□□□ -1.32
SLIRP-204ENST00000555890 GSTA1P08263 222 aa6.81□□□□□ -1.32
SLIRP-204ENST00000555890 HOXD9P28356 352 aaPredicted RBP6.81□□□□□ -1.32
SLIRP-204ENST00000555890 HOXA9P31269 272 aa6.81□□□□□ -1.32
SLIRP-204ENST00000555890 FOXN2P32314 431 aa6.81□□□□□ -1.32
SLIRP-204ENST00000555890 AVPR1AP37288 418 aa6.81□□□□□ -1.32
SLIRP-204ENST00000555890 RPS9P46781 194 aaKnown RBP6.81□□□□□ -1.32
SLIRP-204ENST00000555890 LIMK2P53671 638 aa6.81□□□□□ -1.32
SLIRP-204ENST00000555890 NSUN2Q08J23 767 aaKnown RBP eCLIP6.81□□□□□ -1.32
SLIRP-204ENST00000555890 MTAPQ13126 283 aa6.81□□□□□ -1.32
SLIRP-204ENST00000555890 SRSF5Q13243 272 aaKnown RBP6.81□□□□□ -1.32
SLIRP-204ENST00000555890 CDH18Q13634 790 aa6.81□□□□□ -1.32
SLIRP-204ENST00000555890 MLF2Q15773 248 aaPredicted RBP6.81□□□□□ -1.32
SLIRP-204ENST00000555890 INSCQ1MX18 579 aa6.81□□□□□ -1.32
SLIRP-204ENST00000555890 INO80DQ53TQ3 878 aaPredicted RBP6.81□□□□□ -1.32
SLIRP-204ENST00000555890 RALGPS1Q5JS13 557 aa6.81□□□□□ -1.32
SLIRP-204ENST00000555890 SIRPB2Q5JXA9 342 aa6.81□□□□□ -1.32
SLIRP-204ENST00000555890 MPP7Q5T2T1 576 aa6.81□□□□□ -1.32
SLIRP-204ENST00000555890 TSTD2Q5T7W7 516 aa6.81□□□□□ -1.32
SLIRP-204ENST00000555890 FYB2Q5VWT5 728 aa6.81□□□□□ -1.32
SLIRP-204ENST00000555890 ATG16L1Q676U5 607 aa6.81□□□□□ -1.32
SLIRP-204ENST00000555890 RETSATQ6NUM9 610 aa6.81□□□□□ -1.32
SLIRP-204ENST00000555890 PARM1Q6UWI2 310 aa6.81□□□□□ -1.32
SLIRP-204ENST00000555890 KYAT3Q6YP21 454 aaKnown RBP6.81□□□□□ -1.32
SLIRP-204ENST00000555890 SPATA21Q7Z572 469 aa6.81□□□□□ -1.32
SLIRP-204ENST00000555890 PGBD5Q8N414 524 aa6.81□□□□□ -1.32
SLIRP-204ENST00000555890 ZNF557Q8N988 423 aaPredicted RBP6.81□□□□□ -1.32
SLIRP-204ENST00000555890 RAB3IL1Q8TBN0 382 aa6.81□□□□□ -1.32
SLIRP-204ENST00000555890 DDI1Q8WTU0 396 aa6.81□□□□□ -1.32
SLIRP-204ENST00000555890 ZNF75CPQ92670 426 aaPredicted RBP6.81□□□□□ -1.32
SLIRP-204ENST00000555890 PTPRN2Q92932 1015 aa6.81□□□□□ -1.32
SLIRP-204ENST00000555890 PEX13Q92968 403 aa6.81□□□□□ -1.32
SLIRP-204ENST00000555890 USP13Q92995 863 aaPredicted RBP6.81□□□□□ -1.32
SLIRP-204ENST00000555890 WBP2Q969T9 261 aa6.81□□□□□ -1.32
SLIRP-204ENST00000555890 TADA1Q96BN2 335 aa6.81□□□□□ -1.32
SLIRP-204ENST00000555890 PLPPR2Q96GM1 343 aa6.81□□□□□ -1.32
SLIRP-204ENST00000555890 ZNF419Q96HQ0 510 aaPredicted RBP6.81□□□□□ -1.32
SLIRP-204ENST00000555890 FAM111AQ96PZ2 611 aa6.81□□□□□ -1.32
SLIRP-204ENST00000555890 NUDCD1Q96RS6 583 aa6.81□□□□□ -1.32
SLIRP-204ENST00000555890 SLC22A12Q96S37 553 aa6.81□□□□□ -1.32
SLIRP-204ENST00000555890 SLC13A1Q9BZW2 595 aa6.81□□□□□ -1.32
SLIRP-204ENST00000555890 PCMTD2Q9NV79 361 aa6.81□□□□□ -1.32
SLIRP-204ENST00000555890 FGFR1OP2Q9NVK5 253 aa6.81□□□□□ -1.32
SLIRP-204ENST00000555890 SLC17A7Q9P2U7 560 aa6.81□□□□□ -1.32
SLIRP-204ENST00000555890 MCM8Q9UJA3 840 aa6.81□□□□□ -1.32
SLIRP-204ENST00000555890 VPS28Q9UK41 221 aa6.81□□□□□ -1.32
SLIRP-204ENST00000555890 TLK1Q9UKI8 766 aa6.81□□□□□ -1.32
SLIRP-204ENST00000555890 ARHGAP26Q9UNA1 814 aa6.81□□□□□ -1.32
SLIRP-204ENST00000555890 ANKRD6Q9Y2G4 727 aa6.81□□□□□ -1.32
SLIRP-204ENST00000555890 PLLPQ9Y342 182 aa6.81□□□□□ -1.32
SLIRP-204ENST00000555890 STARD13Q9Y3M8 1113 aa6.81□□□□□ -1.32
SLIRP-204ENST00000555890 CORINQ9Y5Q5 1042 aa6.81□□□□□ -1.32
SLIRP-204ENST00000555890 SVILO95425 2214 aa6.81□□□□□ -1.32
SLIRP-204ENST00000555890 ASCC3Q8N3C0 2202 aaKnown RBP6.81□□□□□ -1.32
SLIRP-204ENST00000555890 ATXN2Q99700 1313 aaKnown RBP6.8□□□□□ -1.32
SLIRP-204ENST00000555890 CCDC195A0A1B0GUA6 201 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 HMX2A2RU54 273 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 WDR91A4D1P6 747 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 ALG1L2C9J202 215 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 AGRPO00253 132 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 LEFTY2O00292 366 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 ZNF197O14709 1029 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 TPP1O14773 563 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 KLF11O14901 512 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 INSIG1O15503 277 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 RRP8O43159 456 aaKnown RBP6.8□□□□□ -1.32
SLIRP-204ENST00000555890 SLC7A4O43246 635 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 SNX3O60493 162 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 RFPL2O75678 378 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 CRTAMO95727 393 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 DHRS4L1P0CG22 281 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 TROVE2P10155 538 aaKnown RBP eCLIP6.8□□□□□ -1.32
SLIRP-204ENST00000555890 EPHA1P21709 976 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 ALDH3A1P30838 453 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 MPLP40238 635 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 CHRNA4P43681 627 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 ARL4DP49703 201 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 CDKN1CP49918 316 aaPredicted RBP6.8□□□□□ -1.32
SLIRP-204ENST00000555890 SCNN1BP51168 640 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 SGSHP51688 502 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 EPHA5P54756 1037 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 SLC12A2P55011 1212 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 RHOAP61586 193 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 PRAMEP78395 509 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 GSTM4Q03013 218 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 PRKCQQ04759 706 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 SLC20A2Q08357 652 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms