RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 SHOC2Q9UQ13 582 aa10.68□□□□□ -0.7
TDP1-212ENST00000555565 KCNK6Q9Y257 313 aa10.68□□□□□ -0.7
TDP1-212ENST00000555565 TMEM184BQ9Y519 407 aaPredicted RBP10.68□□□□□ -0.7
TDP1-212ENST00000555565 MRPS18BQ9Y676 258 aaKnown RBP10.68□□□□□ -0.7
TDP1-212ENST00000555565 RP1L1Q8IWN7 2480 aaPredicted RBP10.67□□□□□ -0.7
TDP1-212ENST00000555565 EFCAB7A8K855 629 aa10.67□□□□□ -0.7
TDP1-212ENST00000555565 PPP1R12AO14974 1030 aaPredicted RBP10.67□□□□□ -0.7
TDP1-212ENST00000555565 NUAK1O60285 661 aa10.67□□□□□ -0.7
TDP1-212ENST00000555565 VPS4BO75351 444 aa10.67□□□□□ -0.7
TDP1-212ENST00000555565 TPM1P09493 284 aa10.67□□□□□ -0.7
TDP1-212ENST00000555565 ACP5P13686 325 aa10.67□□□□□ -0.7
TDP1-212ENST00000555565 TNNT1P13805 278 aa10.67□□□□□ -0.7
TDP1-212ENST00000555565 CSTF2P33240 577 aaKnown RBP eCLIP10.67□□□□□ -0.7
TDP1-212ENST00000555565 SLC1A1P43005 524 aa10.67□□□□□ -0.7
TDP1-212ENST00000555565 NOP2P46087 812 aaKnown RBP10.67□□□□□ -0.7
TDP1-212ENST00000555565 DCDC1P59894 354 aa10.67□□□□□ -0.7
TDP1-212ENST00000555565 MC2RQ01718 297 aa10.67□□□□□ -0.7
TDP1-212ENST00000555565 HHEXQ03014 270 aa10.67□□□□□ -0.7
TDP1-212ENST00000555565 CDK18Q07002 472 aa10.67□□□□□ -0.7
TDP1-212ENST00000555565 TBX2Q13207 712 aaPredicted RBP10.67□□□□□ -0.7
TDP1-212ENST00000555565 TCEAL1Q15170 157 aa10.67□□□□□ -0.7
TDP1-212ENST00000555565 PCSK7Q16549 785 aa10.67□□□□□ -0.7
TDP1-212ENST00000555565 ZNF648Q5T619 568 aaPredicted RBP10.67□□□□□ -0.7
TDP1-212ENST00000555565 TMEM71Q6P5X7 295 aa10.67□□□□□ -0.7
TDP1-212ENST00000555565 IYDQ6PHW0 289 aa10.67□□□□□ -0.7
TDP1-212ENST00000555565 MFSD7Q6UXD7 560 aa10.67□□□□□ -0.7
TDP1-212ENST00000555565 ASB18Q6ZVZ8 466 aa10.67□□□□□ -0.7
TDP1-212ENST00000555565 ARHGAP22Q7Z5H3 698 aa10.67□□□□□ -0.7
TDP1-212ENST00000555565 TMC3Q7Z5M5 1100 aa10.67□□□□□ -0.7
TDP1-212ENST00000555565 RFX6Q8HWS3 928 aa10.67□□□□□ -0.7
TDP1-212ENST00000555565 RHOT1Q8IXI2 618 aa10.67□□□□□ -0.7
TDP1-212ENST00000555565 RNF214Q8ND24 703 aa10.67□□□□□ -0.7
TDP1-212ENST00000555565 SPATA22Q8NHS9 363 aa10.67□□□□□ -0.7
TDP1-212ENST00000555565 STARD8Q92502 1023 aa10.67□□□□□ -0.7
TDP1-212ENST00000555565 SLC38A3Q99624 504 aa10.67□□□□□ -0.7
TDP1-212ENST00000555565 CTRCQ99895 268 aa10.67□□□□□ -0.7
TDP1-212ENST00000555565 DPYSL5Q9BPU6 564 aa10.67□□□□□ -0.7
TDP1-212ENST00000555565 SPATA16Q9BXB7 569 aa10.67□□□□□ -0.7
TDP1-212ENST00000555565 CARD9Q9H257 536 aa10.67□□□□□ -0.7
TDP1-212ENST00000555565 TSPY26PQ9H489 355 aa10.67□□□□□ -0.7
TDP1-212ENST00000555565 RMI1Q9H9A7 625 aa10.67□□□□□ -0.7
TDP1-212ENST00000555565 GLOD4Q9HC38 313 aa10.67□□□□□ -0.7
TDP1-212ENST00000555565 MAGEE1Q9HCI5 957 aa10.67□□□□□ -0.7
TDP1-212ENST00000555565 ARFGAP3Q9NP61 516 aa10.67□□□□□ -0.7
TDP1-212ENST00000555565 DDX56Q9NY93 547 aaKnown RBP10.67□□□□□ -0.7
TDP1-212ENST00000555565 ATXN10Q9UBB4 475 aa10.67□□□□□ -0.7
TDP1-212ENST00000555565 SAE1Q9UBE0 346 aaPredicted RBP10.67□□□□□ -0.7
TDP1-212ENST00000555565 INTUQ9ULD6 942 aa10.67□□□□□ -0.7
TDP1-212ENST00000555565 VPS4AQ9UN37 437 aa10.67□□□□□ -0.7
TDP1-212ENST00000555565 KCTD3Q9Y597 815 aa10.67□□□□□ -0.7
TDP1-212ENST00000555565 ADGRG1Q9Y653 693 aa10.67□□□□□ -0.7
TDP1-212ENST00000555565 OTOGQ6ZRI0 2925 aa10.67□□□□□ -0.7
TDP1-212ENST00000555565 AKR1B15C9JRZ8 316 aaPredicted RBP10.66□□□□□ -0.7
TDP1-212ENST00000555565 GRID2O43424 1007 aa10.66□□□□□ -0.7
TDP1-212ENST00000555565 SNX2O60749 519 aa10.66□□□□□ -0.7
TDP1-212ENST00000555565 DLGAP3O95886 979 aa10.66□□□□□ -0.7
TDP1-212ENST00000555565 MT-CYBP00156 380 aaPredicted RBP10.66□□□□□ -0.7
TDP1-212ENST00000555565 SLC4A1P02730 911 aa10.66□□□□□ -0.7
TDP1-212ENST00000555565 ZNF8P17098 575 aaPredicted RBP10.66□□□□□ -0.7
TDP1-212ENST00000555565 TCN2P20062 427 aa10.66□□□□□ -0.7
TDP1-212ENST00000555565 COMTP21964 271 aa10.66□□□□□ -0.7
TDP1-212ENST00000555565 TNFRSF8P28908 595 aa10.66□□□□□ -0.7
TDP1-212ENST00000555565 CDKN2BP42772 138 aa10.66□□□□□ -0.7
TDP1-212ENST00000555565 RAB15P59190 212 aa10.66□□□□□ -0.7
TDP1-212ENST00000555565 ADCY2Q08462 1091 aa10.66□□□□□ -0.7
TDP1-212ENST00000555565 NFATC2Q13469 925 aa10.66□□□□□ -0.7
TDP1-212ENST00000555565 SEPT6Q14141 434 aa10.66□□□□□ -0.7
TDP1-212ENST00000555565 PRKD1Q15139 912 aaPredicted RBP10.66□□□□□ -0.7
TDP1-212ENST00000555565 SLC14A2Q15849 920 aa10.66□□□□□ -0.7
TDP1-212ENST00000555565 TAZQ16635 292 aa10.66□□□□□ -0.7
TDP1-212ENST00000555565 TEX44Q53QW1 395 aa10.66□□□□□ -0.7
TDP1-212ENST00000555565 ZNF569Q5MCW4 686 aa10.66□□□□□ -0.7
TDP1-212ENST00000555565 ALS2CLQ60I27 953 aa10.66□□□□□ -0.7
TDP1-212ENST00000555565 C16orf46Q6P387 395 aa10.66□□□□□ -0.7
TDP1-212ENST00000555565 CNGA4Q8IV77 575 aa10.66□□□□□ -0.7
TDP1-212ENST00000555565 CCDC112Q8NEF3 446 aa10.66□□□□□ -0.7
TDP1-212ENST00000555565 OR10G6Q8NH81 332 aa10.66□□□□□ -0.7
TDP1-212ENST00000555565 CPT1CQ8TCG5 803 aa10.66□□□□□ -0.7
TDP1-212ENST00000555565 TEKT5Q96M29 485 aa10.66□□□□□ -0.7
TDP1-212ENST00000555565 TEFMQ96QE5 360 aaKnown RBP10.66□□□□□ -0.7
TDP1-212ENST00000555565 ZSCAN5AQ9BUG6 496 aa10.66□□□□□ -0.7
TDP1-212ENST00000555565 EFHD1Q9BUP0 239 aa10.66□□□□□ -0.7
TDP1-212ENST00000555565 OR2AG1Q9H205 316 aa10.66□□□□□ -0.7
TDP1-212ENST00000555565 TRIM39Q9HCM9 518 aa10.66□□□□□ -0.7
TDP1-212ENST00000555565 APMAPQ9HDC9 416 aa10.66□□□□□ -0.7
TDP1-212ENST00000555565 SARS2Q9NP81 518 aaKnown RBP10.66□□□□□ -0.7
TDP1-212ENST00000555565 FBXO8Q9NRD0 319 aa10.66□□□□□ -0.7
TDP1-212ENST00000555565 UBP1Q9NZI7 540 aa10.66□□□□□ -0.7
TDP1-212ENST00000555565 NFKBIL1Q9UBC1 381 aaPredicted RBP10.66□□□□□ -0.7
TDP1-212ENST00000555565 SLC23A2Q9UGH3 650 aa10.66□□□□□ -0.7
TDP1-212ENST00000555565 TLK1Q9UKI8 766 aa10.66□□□□□ -0.7
TDP1-212ENST00000555565 ZNF711Q9Y462 761 aa10.66□□□□□ -0.7
TDP1-212ENST00000555565 MAP4K5Q9Y4K4 846 aa10.66□□□□□ -0.7
TDP1-212ENST00000555565 SPO11Q9Y5K1 396 aa10.66□□□□□ -0.7
TDP1-212ENST00000555565 SHANK1Q9Y566 2161 aa10.66□□□□□ -0.7
TDP1-212ENST00000555565 A0A0A6YYK5 440 aaPredicted RBP10.65□□□□□ -0.7
TDP1-212ENST00000555565 KIR2DS5A0A0G2JLQ3 304 aa10.65□□□□□ -0.7
TDP1-212ENST00000555565 A0A0G2JNG1 304 aa10.65□□□□□ -0.7
TDP1-212ENST00000555565 TTLL8A6PVC2 850 aa10.65□□□□□ -0.7
TDP1-212ENST00000555565 KIR2DS3K7RE56 304 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms