RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 MLNP12872 115 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 HOXD12P35452 270 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 NUDT1P36639 197 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 STC1P52823 247 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 THOP1P52888 689 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 SESN2P58004 480 aaPredicted RBP9.79□□□□□ -0.84
PSEN1-213ENST00000555386 BNC1Q01954 994 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 SEMA5AQ13591 1074 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 PDE1CQ14123 709 aaPredicted RBP9.79□□□□□ -0.84
PSEN1-213ENST00000555386 EFTUD2Q15029 972 aaKnown RBP eCLIP9.79□□□□□ -0.84
PSEN1-213ENST00000555386 SNCBQ16143 134 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 KBTBD12Q3ZCT8 623 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 SWT1Q5T5J6 900 aaKnown RBP9.79□□□□□ -0.84
PSEN1-213ENST00000555386 PEAR1Q5VY43 1037 aaPredicted RBP9.79□□□□□ -0.84
PSEN1-213ENST00000555386 KCTD11Q693B1 232 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 SLC23A3Q6PIS1 610 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 DOK6Q6PKX4 331 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 LVRNQ6Q4G3 990 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 RANBP10Q6VN20 620 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 RD3Q7Z3Z2 195 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 CAND1Q86VP6 1230 aaKnown RBP9.79□□□□□ -0.84
PSEN1-213ENST00000555386 LRRC6Q86X45 466 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 CCNJLQ8IV13 435 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 IGDCC3Q8IVU1 814 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 MFSD2AQ8NA29 543 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 TMEM145Q8NBT3 493 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 ZNF75CPQ92670 426 aaPredicted RBP9.79□□□□□ -0.84
PSEN1-213ENST00000555386 SKA1Q96BD8 255 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 EID2BQ96D98 161 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 DTD2Q96FN9 168 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 LENG8Q96PV6 779 aaPredicted RBP9.79□□□□□ -0.84
PSEN1-213ENST00000555386 EDEM2Q9BV94 578 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 RIOK2Q9BVS4 552 aaKnown RBP9.79□□□□□ -0.84
PSEN1-213ENST00000555386 SPATA16Q9BXB7 569 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 CAPN10Q9HC96 672 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 MAGEE1Q9HCI5 957 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 EIF2B3Q9NR50 452 aaKnown RBP9.79□□□□□ -0.84
PSEN1-213ENST00000555386 TXLNGQ9NUQ3 528 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 MKS1Q9NXB0 559 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 PKD2L2Q9NZM6 624 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 ZC3H7BQ9UGR2 993 aaKnown RBP9.79□□□□□ -0.84
PSEN1-213ENST00000555386 PCDH15Q96QU1 1955 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 CNOT1A5YKK6 2376 aaKnown RBP9.79□□□□□ -0.84
PSEN1-213ENST00000555386 SPEGQ15772 3267 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 C10orf142B7Z368 130 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 KLF11O14901 512 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 VILLO15195 856 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 STX7O15400 261 aaKnown RBP9.79□□□□□ -0.84
PSEN1-213ENST00000555386 SDC3O75056 442 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 SYPP08247 313 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 SNRPAP09012 282 aaKnown RBP9.79□□□□□ -0.84
PSEN1-213ENST00000555386 DHRS4L1P0CG22 281 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 ZNF30P17039 623 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 TGM1P22735 817 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 CNTFP26441 200 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 GPR1P46091 355 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 SPINT3P49223 89 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 SERPINB9P50453 376 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 NCALDP61601 193 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 ELF3P78545 371 aaPredicted RBP9.79□□□□□ -0.84
PSEN1-213ENST00000555386 CRADDP78560 199 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 DNAJC3Q13217 504 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 CDKN3Q16667 212 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 HLA-BQ31612 363 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 TPRG1LQ5T0D9 272 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 CERCAMQ5T4B2 595 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 ICE2Q659A1 982 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 DENND5AQ6IQ26 1287 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 PNCKQ6P2M8 343 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 SH2D5Q6ZV89 423 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 TECPR1Q7Z6L1 1165 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 TRIM74Q86UV6 250 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 TRIM42Q8IWZ5 723 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 MINDY1Q8N5J2 469 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 FITM2Q8N6M3 262 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 GPR26Q8NDV2 337 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 TCP10LQ8TDR4 215 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 LYSMD1Q96S90 227 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 AGAP2Q99490 1192 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 APOOQ9BUR5 198 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 FAM83DQ9H4H8 585 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 GAREM1Q9H706 876 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 DNAJC28Q9NX36 388 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.79□□□□□ -0.84
PSEN1-213ENST00000555386 GRID1Q9ULK0 1009 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 HS3ST3A1Q9Y663 406 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 C2orf81A6NN90 581 aa9.78□□□□□ -0.84
PSEN1-213ENST00000555386 C4orf47A7E2U8 309 aa9.78□□□□□ -0.84
PSEN1-213ENST00000555386 PSMD11O00231 422 aa9.78□□□□□ -0.84
PSEN1-213ENST00000555386 HNRNPCL1O60812 293 aaKnown RBP9.78□□□□□ -0.84
PSEN1-213ENST00000555386 KRT38O76015 456 aa9.78□□□□□ -0.84
PSEN1-213ENST00000555386 TGDSO95455 350 aa9.78□□□□□ -0.84
PSEN1-213ENST00000555386 C1QAP02745 245 aa9.78□□□□□ -0.84
PSEN1-213ENST00000555386 TROVE2P10155 538 aaKnown RBP eCLIP9.78□□□□□ -0.84
PSEN1-213ENST00000555386 NQO1P15559 274 aaKnown RBP9.78□□□□□ -0.84
PSEN1-213ENST00000555386 BPIP17213 487 aa9.78□□□□□ -0.84
PSEN1-213ENST00000555386 CCNFP41002 786 aa9.78□□□□□ -0.84
PSEN1-213ENST00000555386 RABIFP47224 123 aa9.78□□□□□ -0.84
PSEN1-213ENST00000555386 NXPH1P58417 271 aa9.78□□□□□ -0.84
PSEN1-213ENST00000555386 NAB1Q13506 487 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms