RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 GP5P40197 560 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 ACADVLP49748 655 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 NUMBP49757 651 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 TUBP50607 506 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 CLCN3P51790 818 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 CLCN4P51793 760 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 ALDH18A1P54886 795 aaKnown RBP5.93□□□□□ -1.46
VPS33B-203ENST00000554264 CSE1LP55060 971 aaKnown RBP5.93□□□□□ -1.46
VPS33B-203ENST00000554264 ABCE1P61221 599 aaKnown RBP5.93□□□□□ -1.46
VPS33B-203ENST00000554264 DYNLT1P63172 113 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 TUBA4AP68366 448 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 ARHGAP8P85298 464 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 CDC42EP1Q00587 391 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 INCA1Q0VD86 236 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 DBPQ10586 325 aaPredicted RBP5.93□□□□□ -1.46
VPS33B-203ENST00000554264 TRIP10Q15642 601 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 DPYSL2Q16555 572 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 ZNF528Q3MIS6 628 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 ATP13A4Q4VNC1 1196 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 FASTKD1Q53R41 847 aaKnown RBP5.93□□□□□ -1.46
VPS33B-203ENST00000554264 FBLN7Q53RD9 439 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 PIK3R6Q5UE93 754 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 PDPK2PQ6A1A2 396 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 SPOPLQ6IQ16 392 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 EFCAB12Q6NXP0 572 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 LRRC8BQ6P9F7 803 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 C1orf228Q6PIY5 440 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 LCLAT1Q6UWP7 414 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 GLB1LQ6UWU2 654 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 KBTBD6Q86V97 674 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 PQLC1Q8N2U9 271 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 DCLK2Q8N568 766 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 WDTC1Q8N5D0 677 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 CPSF7Q8N684 471 aaKnown RBP5.93□□□□□ -1.46
VPS33B-203ENST00000554264 PLD5Q8N7P1 536 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 CNTD1Q8N815 330 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 SUMF1Q8NBK3 374 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 OR5B17Q8NGF7 314 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 GABPB2Q8TAK5 448 aaPredicted RBP5.93□□□□□ -1.46
VPS33B-203ENST00000554264 SLC26A7Q8TE54 656 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 CFAP36Q96G28 342 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 TMEM176AQ96HP8 235 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 FAR2Q96K12 515 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 TSNARE1Q96NA8 513 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 KLHL5Q96PQ7 755 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 QKIQ96PU8 341 aaKnown RBP eCLIP5.93□□□□□ -1.46
VPS33B-203ENST00000554264 TUBGCP5Q96RT8 1024 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 TTC1Q99614 292 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 ACO2Q99798 780 aaKnown RBP5.93□□□□□ -1.46
VPS33B-203ENST00000554264 TCHPQ9BT92 498 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 EFHD1Q9BUP0 239 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 TARS2Q9BW92 718 aaKnown RBP5.93□□□□□ -1.46
VPS33B-203ENST00000554264 XYLT2Q9H1B5 865 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 USP29Q9HBJ7 922 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 WDR6Q9NNW5 1121 aaKnown RBP5.93□□□□□ -1.46
VPS33B-203ENST00000554264 CHST12Q9NRB3 414 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 MRPL17Q9NRX2 175 aaKnown RBP5.93□□□□□ -1.46
VPS33B-203ENST00000554264 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.93□□□□□ -1.46
VPS33B-203ENST00000554264 PRMT7Q9NVM4 692 aaPredicted RBP5.93□□□□□ -1.46
VPS33B-203ENST00000554264 CHCHD3Q9NX63 227 aaKnown RBP5.93□□□□□ -1.46
VPS33B-203ENST00000554264 UTP6Q9NYH9 597 aaKnown RBP5.93□□□□□ -1.46
VPS33B-203ENST00000554264 ARMCX1Q9P291 453 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 NCDNQ9UBB6 729 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 CA14Q9ULX7 337 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 DERAQ9Y315 318 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 MYO10Q9HD67 2058 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 PTPRJQ12913 1337 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 CACNA1BQ00975 2339 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 C15orf38-AP3S2A0A0A6YYH1 394 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 SLC12A8A0AV02 714 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 RGSL1A5PLK6 1076 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 TRPC5OSA6NMA1 111 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 ZNF839A8K0R7 811 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 M0QYV0 167 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 ACKR2O00590 384 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 PRKCBP05771 671 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 DCNP07585 359 aaKnown RBP5.92□□□□□ -1.46
VPS33B-203ENST00000554264 APRTP07741 180 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 CNPP09543 421 aaKnown RBP5.92□□□□□ -1.46
VPS33B-203ENST00000554264 FAM58BPP0C7Q3 252 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 UBTFL6P0CB48 400 aaPredicted RBP5.92□□□□□ -1.46
VPS33B-203ENST00000554264 RALBP11234 206 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 FGF3P11487 239 aaPredicted RBP5.92□□□□□ -1.46
VPS33B-203ENST00000554264 DARSP14868 501 aaKnown RBP5.92□□□□□ -1.46
VPS33B-203ENST00000554264 TCF4P15884 667 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 PDGFRAP16234 1089 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 ZNF28P17035 718 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 IL1R2P27930 398 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 MAGEA12P43365 314 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 ACADSBP45954 432 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 ALDH1A3P47895 512 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 PSMD8P48556 350 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 HDAC4P56524 1084 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 PDE1BQ01064 536 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 SULT2A1Q06520 285 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 NIPAL4Q0D2K0 466 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 TBL3Q12788 808 aaKnown RBP5.92□□□□□ -1.46
VPS33B-203ENST00000554264 PRKAA1Q13131 559 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 TUBB3Q13509 450 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 CAPSQ13938 189 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms