RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 PRKAB1Q9Y478 270 aa6.52□□□□□ -1.37
SLIRP-203ENST00000554074 TMEM184BQ9Y519 407 aaPredicted RBP6.52□□□□□ -1.37
SLIRP-203ENST00000554074 SNRNP200O75643 2136 aaKnown RBP6.52□□□□□ -1.37
SLIRP-203ENST00000554074 CCDC88CQ9P219 2028 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 TRBV23OR9-2A0A075B6M9 112 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 ZNF891A8MT65 544 aaPredicted RBP6.51□□□□□ -1.37
SLIRP-203ENST00000554074 HACD1B0YJ81 288 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 RAD1O60671 282 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 CST8O60676 142 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 PPFIA2O75334 1257 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 PMPCBO75439 489 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 IPO7O95373 1038 aaKnown RBP6.51□□□□□ -1.37
SLIRP-203ENST00000554074 PIRTP0C851 137 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 LIFP15018 202 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 ZNF7P17097 686 aaPredicted RBP6.51□□□□□ -1.37
SLIRP-203ENST00000554074 VCLP18206 1134 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 ITGB6P18564 788 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 WT1P19544 449 aaPredicted RBP6.51□□□□□ -1.37
SLIRP-203ENST00000554074 HLA-DPA1P20036 260 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 MPSTP25325 297 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 MAP4P27816 1152 aaKnown RBP6.51□□□□□ -1.37
SLIRP-203ENST00000554074 DYNLT1P63172 113 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 DMPKQ09013 629 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 WASHC5Q12768 1159 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 MPP3Q13368 585 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 XRCC4Q13426 336 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 NFATC2Q13469 925 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 PPP2R5EQ16537 467 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 PCSK7Q16549 785 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 TBR1Q16650 682 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 INSCQ1MX18 579 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 CRTC2Q53ET0 693 aaPredicted RBP6.51□□□□□ -1.37
SLIRP-203ENST00000554074 ALS2CLQ60I27 953 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 ANKS6Q68DC2 871 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 C11orf63Q6NUN7 778 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 KDELC1Q6UW63 502 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 NPNTQ6UXI9 565 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 SPOCD1Q6ZMY3 1216 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 TMEM26Q6ZUK4 368 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 ZNF761Q86XN6 746 aaPredicted RBP6.51□□□□□ -1.37
SLIRP-203ENST00000554074 FAM129CQ86XR2 697 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 ZNF547Q8IVP9 402 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 KATNAL2Q8IYT4 538 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 RCOR2Q8IZ40 523 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 CACNA2D3Q8IZS8 1091 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 NLGN4XQ8N0W4 816 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 TTC30BQ8N4P2 665 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 IL22RA1Q8N6P7 574 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 NLGN4YQ8NFZ3 816 aaPredicted RBP6.51□□□□□ -1.37
SLIRP-203ENST00000554074 SPATA22Q8NHS9 363 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 HTR3CQ8WXA8 447 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 NCSTNQ92542 709 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 P3H4Q92791 437 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 EXTL1Q92935 676 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 RTP4Q96DX8 246 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 SLC45A3Q96JT2 553 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 CATSPER2Q96P56 530 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 FCRL5Q96RD9 977 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 C19orf43Q9BQ61 176 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 ARHGAP9Q9BRR9 750 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 CEP41Q9BYV8 373 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 ZCCHC2Q9C0B9 1178 aaKnown RBP6.51□□□□□ -1.37
SLIRP-203ENST00000554074 RAB33BQ9H082 229 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 ZMYND15Q9H091 742 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 PRDM8Q9NQV8 689 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 KLC4Q9NSK0 619 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 SMOXQ9NWM0 555 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 GEMIN8Q9NWZ8 242 aaKnown RBP6.51□□□□□ -1.37
SLIRP-203ENST00000554074 SIDT1Q9NXL6 827 aaKnown RBP6.51□□□□□ -1.37
SLIRP-203ENST00000554074 ZNF624Q9P2J8 865 aaPredicted RBP6.51□□□□□ -1.37
SLIRP-203ENST00000554074 EPHA6Q9UF33 1036 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 TUBD1Q9UJT1 453 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 TRHDEQ9UKU6 1024 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 EFR3BQ9Y2G0 817 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.51□□□□□ -1.37
SLIRP-203ENST00000554074 ALG6Q9Y672 507 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 DNMT3AQ9Y6K1 912 aaPredicted RBP6.51□□□□□ -1.37
SLIRP-203ENST00000554074 MED13Q9UHV7 2174 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 NBASA2RRP1 2371 aa6.51□□□□□ -1.37
SLIRP-203ENST00000554074 FER1L5A0AVI2 2057 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 hCG_1818297A0A087WSY0 165 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 KLHL33A6NCF5 533 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 AGRPO00253 132 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 AURKAO14965 403 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 SNX2O60749 519 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 ZNF189O75820 626 aaPredicted RBP6.5□□□□□ -1.37
SLIRP-203ENST00000554074 UBXN7O94888 489 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 CDK14O94921 469 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 ZRANB2O95218 330 aaKnown RBP eCLIP6.5□□□□□ -1.37
SLIRP-203ENST00000554074 DLGAP3O95886 979 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 VIPP01282 170 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 BRAFP15056 766 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 PECAM1P16284 738 aaPredicted RBP6.5□□□□□ -1.37
SLIRP-203ENST00000554074 NFKB1P19838 968 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 IDSP22304 550 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 CD68P34810 354 aaPredicted RBP6.5□□□□□ -1.37
SLIRP-203ENST00000554074 SPAM1P38567 509 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 SLC19A1P41440 591 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 MAGEA1P43355 309 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 TNNT3P45378 269 aaPredicted RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms