RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 MN1Q10571 1320 aaPredicted RBP5.31□□□□□ -1.56
HOXB3-213ENST00000552000 ZNF469Q96JG9 3925 aaPredicted RBP5.31□□□□□ -1.56
HOXB3-213ENST00000552000 FAM237AA0A1B0GTK4 181 aa5.31□□□□□ -1.56
HOXB3-213ENST00000552000 A6NL46 340 aa5.31□□□□□ -1.56
HOXB3-213ENST00000552000 PRSS44E7EML9 344 aa5.31□□□□□ -1.56
HOXB3-213ENST00000552000 PSMA7O14818 248 aa5.31□□□□□ -1.56
HOXB3-213ENST00000552000 SPAG6O75602 509 aa5.31□□□□□ -1.56
HOXB3-213ENST00000552000 ZNF202O95125 648 aa5.31□□□□□ -1.56
HOXB3-213ENST00000552000 PLEKP08567 350 aaPredicted RBP5.31□□□□□ -1.56
HOXB3-213ENST00000552000 ANKRD34CP0C6C1 535 aa5.31□□□□□ -1.56
HOXB3-213ENST00000552000 SERPINA4P29622 427 aa5.31□□□□□ -1.56
HOXB3-213ENST00000552000 HNRNPH3P31942 346 aaKnown RBP5.31□□□□□ -1.56
HOXB3-213ENST00000552000 SOX18P35713 384 aa5.31□□□□□ -1.56
HOXB3-213ENST00000552000 SCNN1AP37088 669 aa5.31□□□□□ -1.56
HOXB3-213ENST00000552000 ETV3P41162 512 aa5.31□□□□□ -1.56
HOXB3-213ENST00000552000 ITGA1P56199 1179 aa5.31□□□□□ -1.56
HOXB3-213ENST00000552000 APBA1Q02410 837 aa5.31□□□□□ -1.56
HOXB3-213ENST00000552000 CDK18Q07002 472 aa5.31□□□□□ -1.56
HOXB3-213ENST00000552000 IL10RAQ13651 578 aa5.31□□□□□ -1.56
HOXB3-213ENST00000552000 CNGA3Q16281 694 aa5.31□□□□□ -1.56
HOXB3-213ENST00000552000 UGT8Q16880 541 aa5.31□□□□□ -1.56
HOXB3-213ENST00000552000 C15orf59Q2T9L4 293 aaPredicted RBP5.31□□□□□ -1.56
HOXB3-213ENST00000552000 PYCR3Q53H96 274 aa5.31□□□□□ -1.56
HOXB3-213ENST00000552000 KLHL10Q6JEL2 608 aa5.31□□□□□ -1.56
HOXB3-213ENST00000552000 FAM199XQ6PEV8 388 aaPredicted RBP5.31□□□□□ -1.56
HOXB3-213ENST00000552000 BNIPLQ7Z465 357 aa5.31□□□□□ -1.56
HOXB3-213ENST00000552000 TRIM74Q86UV6 250 aa5.31□□□□□ -1.56
HOXB3-213ENST00000552000 PLXDC1Q8IUK5 500 aa5.31□□□□□ -1.56
HOXB3-213ENST00000552000 TRIM59Q8IWR1 403 aa5.31□□□□□ -1.56
HOXB3-213ENST00000552000 RHOT1Q8IXI2 618 aa5.31□□□□□ -1.56
HOXB3-213ENST00000552000 IQCKQ8N0W5 287 aa5.31□□□□□ -1.56
HOXB3-213ENST00000552000 EMC1Q8N766 993 aa5.31□□□□□ -1.56
HOXB3-213ENST00000552000 RTL3Q8N8U3 475 aaKnown RBP5.31□□□□□ -1.56
HOXB3-213ENST00000552000 THAP4Q8WY91 577 aa5.31□□□□□ -1.56
HOXB3-213ENST00000552000 SHC3Q92529 594 aa5.31□□□□□ -1.56
HOXB3-213ENST00000552000 ECHDC3Q96DC8 303 aa5.31□□□□□ -1.56
HOXB3-213ENST00000552000 C18orf8Q96DM3 657 aa5.31□□□□□ -1.56
HOXB3-213ENST00000552000 DTD2Q96FN9 168 aa5.31□□□□□ -1.56
HOXB3-213ENST00000552000 TUBGCP5Q96RT8 1024 aa5.31□□□□□ -1.56
HOXB3-213ENST00000552000 NUDT9Q9BW91 350 aa5.31□□□□□ -1.56
HOXB3-213ENST00000552000 PDCL3Q9H2J4 239 aa5.31□□□□□ -1.56
HOXB3-213ENST00000552000 STN1Q9H668 368 aaKnown RBP5.31□□□□□ -1.56
HOXB3-213ENST00000552000 RETREG1Q9H6L5 497 aa5.31□□□□□ -1.56
HOXB3-213ENST00000552000 ATP13A3Q9H7F0 1226 aa5.31□□□□□ -1.56
HOXB3-213ENST00000552000 AKIRIN1Q9H9L7 192 aaPredicted RBP5.31□□□□□ -1.56
HOXB3-213ENST00000552000 SARS2Q9NP81 518 aaKnown RBP5.31□□□□□ -1.56
HOXB3-213ENST00000552000 LHX9Q9NQ69 397 aa5.31□□□□□ -1.56
HOXB3-213ENST00000552000 TMEM51Q9NW97 253 aa5.31□□□□□ -1.56
HOXB3-213ENST00000552000 RMND1Q9NWS8 449 aa5.31□□□□□ -1.56
HOXB3-213ENST00000552000 CNOT8Q9UFF9 292 aaKnown RBP5.31□□□□□ -1.56
HOXB3-213ENST00000552000 SLC17A4Q9Y2C5 497 aa5.31□□□□□ -1.56
HOXB3-213ENST00000552000 PCDHGB7Q9Y5F8 929 aa5.31□□□□□ -1.56
HOXB3-213ENST00000552000 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.31□□□□□ -1.56
HOXB3-213ENST00000552000 LILRA5A6NI73 299 aa5.3□□□□□ -1.56
HOXB3-213ENST00000552000 C21orf140B9A014 251 aa5.3□□□□□ -1.56
HOXB3-213ENST00000552000 F5H423 210 aaPredicted RBP5.3□□□□□ -1.56
HOXB3-213ENST00000552000 J3KR12 359 aa5.3□□□□□ -1.56
HOXB3-213ENST00000552000 ZNF185O15231 689 aa5.3□□□□□ -1.56
HOXB3-213ENST00000552000 LRRTM2O43300 516 aa5.3□□□□□ -1.56
HOXB3-213ENST00000552000 KIF1CO43896 1103 aaKnown RBP5.3□□□□□ -1.56
HOXB3-213ENST00000552000 SNX2O60749 519 aa5.3□□□□□ -1.56
HOXB3-213ENST00000552000 PRAMEF11O60813 436 aa5.3□□□□□ -1.56
HOXB3-213ENST00000552000 ZG16O60844 167 aa5.3□□□□□ -1.56
HOXB3-213ENST00000552000 CEACAM4O75871 244 aa5.3□□□□□ -1.56
HOXB3-213ENST00000552000 HEXIM1O94992 359 aaKnown RBP5.3□□□□□ -1.56
HOXB3-213ENST00000552000 TIAF1O95411 115 aa5.3□□□□□ -1.56
HOXB3-213ENST00000552000 C9P02748 559 aa5.3□□□□□ -1.56
HOXB3-213ENST00000552000 MT-ND3P03897 115 aa5.3□□□□□ -1.56
HOXB3-213ENST00000552000 SNRPB2P08579 225 aaKnown RBP5.3□□□□□ -1.56
HOXB3-213ENST00000552000 PNMA6AP0CW24 399 aaPredicted RBP5.3□□□□□ -1.56
HOXB3-213ENST00000552000 TYRP1P17643 537 aa5.3□□□□□ -1.56
HOXB3-213ENST00000552000 SLC9A1P19634 815 aa5.3□□□□□ -1.56
HOXB3-213ENST00000552000 PTPN4P29074 926 aa5.3□□□□□ -1.56
HOXB3-213ENST00000552000 EPHB2P29323 1055 aa5.3□□□□□ -1.56
HOXB3-213ENST00000552000 GPR1P46091 355 aa5.3□□□□□ -1.56
HOXB3-213ENST00000552000 GABRB2P47870 512 aa5.3□□□□□ -1.56
HOXB3-213ENST00000552000 NDST2P52849 883 aa5.3□□□□□ -1.56
HOXB3-213ENST00000552000 PER3P56645 1201 aa5.3□□□□□ -1.56
HOXB3-213ENST00000552000 BCL2L1Q07817 233 aa5.3□□□□□ -1.56
HOXB3-213ENST00000552000 RAPSNQ13702 412 aa5.3□□□□□ -1.56
HOXB3-213ENST00000552000 PKP1Q13835 747 aa5.3□□□□□ -1.56
HOXB3-213ENST00000552000 IL11RAQ14626 422 aa5.3□□□□□ -1.56
HOXB3-213ENST00000552000 TSNAXIP1Q2TAA8 658 aa5.3□□□□□ -1.56
HOXB3-213ENST00000552000 PARP15Q460N3 678 aa5.3□□□□□ -1.56
HOXB3-213ENST00000552000 PLEKHN1Q494U1 663 aaPredicted RBP5.3□□□□□ -1.56
HOXB3-213ENST00000552000 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.3□□□□□ -1.56
HOXB3-213ENST00000552000 COBLL1Q53SF7 1204 aa5.3□□□□□ -1.56
HOXB3-213ENST00000552000 ANKRD34AQ69YU3 496 aa5.3□□□□□ -1.56
HOXB3-213ENST00000552000 ISM2Q6H9L7 571 aa5.3□□□□□ -1.56
HOXB3-213ENST00000552000 TRIM65Q6PJ69 517 aa5.3□□□□□ -1.56
HOXB3-213ENST00000552000 Q6ZVL8 140 aa5.3□□□□□ -1.56
HOXB3-213ENST00000552000 HSD11B1LQ7Z5J1 315 aa5.3□□□□□ -1.56
HOXB3-213ENST00000552000 SYVN1Q86TM6 617 aa5.3□□□□□ -1.56
HOXB3-213ENST00000552000 SLC9B2Q86UD5 537 aa5.3□□□□□ -1.56
HOXB3-213ENST00000552000 PPP1R3BQ86XI6 285 aa5.3□□□□□ -1.56
HOXB3-213ENST00000552000 GALNT13Q8IUC8 556 aa5.3□□□□□ -1.56
HOXB3-213ENST00000552000 PYROXD2Q8N2H3 581 aa5.3□□□□□ -1.56
HOXB3-213ENST00000552000 CCDC185Q8N715 623 aa5.3□□□□□ -1.56
HOXB3-213ENST00000552000 TMEM35BQ8NCS4 154 aa5.3□□□□□ -1.56
HOXB3-213ENST00000552000 FDCSPQ8NFU4 85 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms