RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 TRIM48Q8IWZ4 208 aa12.66□□□□□ -0.38
PTCH1-221ENST00000550914 CLEC18CQ8NCF0 446 aa12.66□□□□□ -0.38
PTCH1-221ENST00000550914 GPR26Q8NDV2 337 aa12.66□□□□□ -0.38
PTCH1-221ENST00000550914 IMP4Q96G21 291 aaKnown RBP12.66□□□□□ -0.38
PTCH1-221ENST00000550914 SLC25A51Q9H1U9 297 aa12.66□□□□□ -0.38
PTCH1-221ENST00000550914 ZNF71Q9NQZ8 489 aaPredicted RBP12.66□□□□□ -0.38
PTCH1-221ENST00000550914 SCHIP1Q9P0W5 487 aaPredicted RBP12.66□□□□□ -0.38
PTCH1-221ENST00000550914 ZNF624Q9P2J8 865 aaPredicted RBP12.66□□□□□ -0.38
PTCH1-221ENST00000550914 ANKMY1Q9P2S6 941 aa12.66□□□□□ -0.38
PTCH1-221ENST00000550914 EPHA6Q9UF33 1036 aa12.66□□□□□ -0.38
PTCH1-221ENST00000550914 KCND3Q9UK17 655 aa12.66□□□□□ -0.38
PTCH1-221ENST00000550914 FGF5P12034 268 aa12.65□□□□□ -0.38
PTCH1-221ENST00000550914 AMD1P17707 334 aa12.65□□□□□ -0.38
PTCH1-221ENST00000550914 HNRNPH3P31942 346 aaKnown RBP12.65□□□□□ -0.38
PTCH1-221ENST00000550914 DLSTP36957 453 aa12.65□□□□□ -0.38
PTCH1-221ENST00000550914 CAPZBP47756 277 aa12.65□□□□□ -0.38
PTCH1-221ENST00000550914 UBASH3AP57075 661 aa12.65□□□□□ -0.38
PTCH1-221ENST00000550914 FOXM1Q08050 763 aa12.65□□□□□ -0.38
PTCH1-221ENST00000550914 KLRB1Q12918 225 aa12.65□□□□□ -0.38
PTCH1-221ENST00000550914 GALNT3Q14435 633 aa12.65□□□□□ -0.38
PTCH1-221ENST00000550914 PDK1Q15118 436 aa12.65□□□□□ -0.38
PTCH1-221ENST00000550914 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.65□□□□□ -0.38
PTCH1-221ENST00000550914 SLC9A4Q6AI14 798 aa12.65□□□□□ -0.38
PTCH1-221ENST00000550914 TCTN3Q6NUS6 607 aa12.65□□□□□ -0.38
PTCH1-221ENST00000550914 NT5DC3Q86UY8 548 aa12.65□□□□□ -0.38
PTCH1-221ENST00000550914 CPNE8Q86YQ8 564 aa12.65□□□□□ -0.38
PTCH1-221ENST00000550914 PLD5Q8N7P1 536 aa12.65□□□□□ -0.38
PTCH1-221ENST00000550914 LRRN4Q8WUT4 740 aa12.65□□□□□ -0.38
PTCH1-221ENST00000550914 CTNNBL1Q8WYA6 563 aaPredicted RBP12.65□□□□□ -0.38
PTCH1-221ENST00000550914 KLHL6Q8WZ60 621 aa12.65□□□□□ -0.38
PTCH1-221ENST00000550914 TADA1Q96BN2 335 aa12.65□□□□□ -0.38
PTCH1-221ENST00000550914 ZDHHC12Q96GR4 267 aa12.65□□□□□ -0.38
PTCH1-221ENST00000550914 TGM7Q96PF1 710 aa12.65□□□□□ -0.38
PTCH1-221ENST00000550914 VPS35Q96QK1 796 aa12.65□□□□□ -0.38
PTCH1-221ENST00000550914 GPR63Q9BZJ6 419 aa12.65□□□□□ -0.38
PTCH1-221ENST00000550914 RAB33BQ9H082 229 aa12.65□□□□□ -0.38
PTCH1-221ENST00000550914 BRD8Q9H0E9 1235 aa12.65□□□□□ -0.38
PTCH1-221ENST00000550914 SLC40A1Q9NP59 571 aa12.65□□□□□ -0.38
PTCH1-221ENST00000550914 SLC23A2Q9UGH3 650 aa12.65□□□□□ -0.38
PTCH1-221ENST00000550914 ZNF711Q9Y462 761 aa12.65□□□□□ -0.38
PTCH1-221ENST00000550914 PCDHGA6Q9Y5G7 932 aa12.65□□□□□ -0.38
PTCH1-221ENST00000550914 KCNMB2Q9Y691 235 aa12.65□□□□□ -0.38
PTCH1-221ENST00000550914 SLC30A1Q9Y6M5 507 aa12.65□□□□□ -0.38
PTCH1-221ENST00000550914 ICE1Q9Y2F5 2266 aa12.65□□□□□ -0.38
PTCH1-221ENST00000550914 NBPF19A0A087WUL8 3843 aa12.64□□□□□ -0.39
PTCH1-221ENST00000550914 PDZK1P1A8MUH7 402 aa12.64□□□□□ -0.39
PTCH1-221ENST00000550914 MKRN2OSH3BPM6 223 aa12.64□□□□□ -0.39
PTCH1-221ENST00000550914 KCNJ13O60928 360 aa12.64□□□□□ -0.39
PTCH1-221ENST00000550914 CDK14O94921 469 aa12.64□□□□□ -0.39
PTCH1-221ENST00000550914 NDUFA10O95299 355 aa12.64□□□□□ -0.39
PTCH1-221ENST00000550914 MT-ND3P03897 115 aa12.64□□□□□ -0.39
PTCH1-221ENST00000550914 NTRK1P04629 796 aa12.64□□□□□ -0.39
PTCH1-221ENST00000550914 GYPCP04921 128 aa12.64□□□□□ -0.39
PTCH1-221ENST00000550914 BRAFP15056 766 aa12.64□□□□□ -0.39
PTCH1-221ENST00000550914 ZFXP17010 805 aaPredicted RBP12.64□□□□□ -0.39
PTCH1-221ENST00000550914 BPIP17213 487 aa12.64□□□□□ -0.39
PTCH1-221ENST00000550914 TYRP1P17643 537 aa12.64□□□□□ -0.39
PTCH1-221ENST00000550914 VCLP18206 1134 aa12.64□□□□□ -0.39
PTCH1-221ENST00000550914 IDSP22304 550 aa12.64□□□□□ -0.39
PTCH1-221ENST00000550914 F8A1P23610 371 aa12.64□□□□□ -0.39
PTCH1-221ENST00000550914 CDK18Q07002 472 aa12.64□□□□□ -0.39
PTCH1-221ENST00000550914 ZFYVE27Q5T4F4 411 aa12.64□□□□□ -0.39
PTCH1-221ENST00000550914 ALS2CLQ60I27 953 aa12.64□□□□□ -0.39
PTCH1-221ENST00000550914 C16orf46Q6P387 395 aa12.64□□□□□ -0.39
PTCH1-221ENST00000550914 CRTC3Q6UUV7 619 aa12.64□□□□□ -0.39
PTCH1-221ENST00000550914 ZNF547Q8IVP9 402 aa12.64□□□□□ -0.39
PTCH1-221ENST00000550914 DTX3LQ8TDB6 740 aa12.64□□□□□ -0.39
PTCH1-221ENST00000550914 RAPGEF5Q92565 580 aa12.64□□□□□ -0.39
PTCH1-221ENST00000550914 STAMBPL1Q96FJ0 436 aa12.64□□□□□ -0.39
PTCH1-221ENST00000550914 OLFM3Q96PB7 478 aa12.64□□□□□ -0.39
PTCH1-221ENST00000550914 OR6C1Q96RD1 312 aa12.64□□□□□ -0.39
PTCH1-221ENST00000550914 ARFGAP3Q9NP61 516 aa12.64□□□□□ -0.39
PTCH1-221ENST00000550914 SEMA5BQ9P283 1151 aa12.64□□□□□ -0.39
PTCH1-221ENST00000550914 CROTQ9UKG9 612 aa12.64□□□□□ -0.39
PTCH1-221ENST00000550914 SHOC2Q9UQ13 582 aa12.64□□□□□ -0.39
PTCH1-221ENST00000550914 POLHQ9Y253 713 aa12.64□□□□□ -0.39
PTCH1-221ENST00000550914 HEY1Q9Y5J3 304 aa12.64□□□□□ -0.39
PTCH1-221ENST00000550914 MED13Q9UHV7 2174 aa12.63□□□□□ -0.39
PTCH1-221ENST00000550914 LRRD1A4D1F6 860 aa12.63□□□□□ -0.39
PTCH1-221ENST00000550914 PPP1R12AO14974 1030 aaPredicted RBP12.63□□□□□ -0.39
PTCH1-221ENST00000550914 RASSF9O75901 435 aa12.63□□□□□ -0.39
PTCH1-221ENST00000550914 KIAA0754O94854 1291 aa12.63□□□□□ -0.39
PTCH1-221ENST00000550914 NDST3O95803 873 aa12.63□□□□□ -0.39
PTCH1-221ENST00000550914 CCNYL3P0C7X3 344 aa12.63□□□□□ -0.39
PTCH1-221ENST00000550914 PIRTP0C851 137 aa12.63□□□□□ -0.39
PTCH1-221ENST00000550914 ZNF28P17035 718 aa12.63□□□□□ -0.39
PTCH1-221ENST00000550914 NELFEP18615 380 aaKnown RBP12.63□□□□□ -0.39
PTCH1-221ENST00000550914 LEPRP48357 1165 aaKnown RBP12.63□□□□□ -0.39
PTCH1-221ENST00000550914 CD97P48960 835 aa12.63□□□□□ -0.39
PTCH1-221ENST00000550914 SH3BP2P78314 561 aa12.63□□□□□ -0.39
PTCH1-221ENST00000550914 AP1B1Q10567 949 aa12.63□□□□□ -0.39
PTCH1-221ENST00000550914 GPR18Q14330 331 aa12.63□□□□□ -0.39
PTCH1-221ENST00000550914 IGFBP7Q16270 282 aa12.63□□□□□ -0.39
PTCH1-221ENST00000550914 SLC18A3Q16572 532 aa12.63□□□□□ -0.39
PTCH1-221ENST00000550914 ZNF648Q5T619 568 aaPredicted RBP12.63□□□□□ -0.39
PTCH1-221ENST00000550914 ATP1A1-AS1Q5TC04 95 aa12.63□□□□□ -0.39
PTCH1-221ENST00000550914 ZDHHC20Q5W0Z9 365 aa12.63□□□□□ -0.39
PTCH1-221ENST00000550914 CCDC70Q6NSX1 233 aa12.63□□□□□ -0.39
PTCH1-221ENST00000550914 CAVIN1Q6NZI2 390 aaKnown RBP12.63□□□□□ -0.39
PTCH1-221ENST00000550914 C11orf96Q7Z7L8 435 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms