RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 GIMD1P0DJR0 217 aa12.88□□□□□ -0.35
RAB5C-206ENST00000550406 PAMP19021 973 aa12.88□□□□□ -0.35
RAB5C-206ENST00000550406 TNFRSF8P28908 595 aa12.88□□□□□ -0.35
RAB5C-206ENST00000550406 GNPDA1P46926 289 aa12.88□□□□□ -0.35
RAB5C-206ENST00000550406 PPARDQ03181 441 aa12.88□□□□□ -0.35
RAB5C-206ENST00000550406 HSP90AA5PQ58FG0 334 aa12.88□□□□□ -0.35
RAB5C-206ENST00000550406 ZNF789Q5FWF6 425 aa12.88□□□□□ -0.35
RAB5C-206ENST00000550406 XKR5Q6UX68 686 aa12.88□□□□□ -0.35
RAB5C-206ENST00000550406 CCNI2Q6ZMN8 369 aaPredicted RBP12.88□□□□□ -0.35
RAB5C-206ENST00000550406 C11orf96Q7Z7L8 435 aa12.88□□□□□ -0.35
RAB5C-206ENST00000550406 KCNMB4Q86W47 210 aa12.88□□□□□ -0.35
RAB5C-206ENST00000550406 RELL1Q8IUW5 271 aa12.88□□□□□ -0.35
RAB5C-206ENST00000550406 DENND6AQ8IWF6 608 aa12.88□□□□□ -0.35
RAB5C-206ENST00000550406 SLC25A45Q8N413 288 aa12.88□□□□□ -0.35
RAB5C-206ENST00000550406 CCL4L1Q8NHW4 92 aa12.88□□□□□ -0.35
RAB5C-206ENST00000550406 SAP25Q8TEE9 199 aa12.88□□□□□ -0.35
RAB5C-206ENST00000550406 SGF29Q96ES7 293 aa12.88□□□□□ -0.35
RAB5C-206ENST00000550406 FMO2Q99518 471 aa12.88□□□□□ -0.35
RAB5C-206ENST00000550406 TXLNGYQ9BZA5 131 aa12.88□□□□□ -0.35
RAB5C-206ENST00000550406 CARS2Q9HA77 564 aaKnown RBP12.88□□□□□ -0.35
RAB5C-206ENST00000550406 LRRC4CQ9HCJ2 640 aa12.88□□□□□ -0.35
RAB5C-206ENST00000550406 SMYD2Q9NRG4 433 aa12.88□□□□□ -0.35
RAB5C-206ENST00000550406 IARS2Q9NSE4 1012 aaKnown RBP12.88□□□□□ -0.35
RAB5C-206ENST00000550406 C20orf96Q9NUD7 363 aaPredicted RBP12.88□□□□□ -0.35
RAB5C-206ENST00000550406 DNAAF2Q9NVR5 837 aaKnown RBP12.88□□□□□ -0.35
RAB5C-206ENST00000550406 SLC17A6Q9P2U8 582 aa12.88□□□□□ -0.35
RAB5C-206ENST00000550406 MTRF1LQ9UGC7 380 aaKnown RBP12.88□□□□□ -0.35
RAB5C-206ENST00000550406 SLC23A2Q9UGH3 650 aa12.88□□□□□ -0.35
RAB5C-206ENST00000550406 MOSPD1Q9UJG1 213 aa12.88□□□□□ -0.35
RAB5C-206ENST00000550406 GRID2O43424 1007 aa12.87□□□□□ -0.35
RAB5C-206ENST00000550406 SDC3O75056 442 aa12.87□□□□□ -0.35
RAB5C-206ENST00000550406 PIAS2O75928 621 aa12.87□□□□□ -0.35
RAB5C-206ENST00000550406 RASGRP1O95267 797 aa12.87□□□□□ -0.35
RAB5C-206ENST00000550406 CER1O95813 267 aa12.87□□□□□ -0.35
RAB5C-206ENST00000550406 ATP1B2P14415 290 aaPredicted RBP12.87□□□□□ -0.35
RAB5C-206ENST00000550406 MSH3P20585 1137 aa12.87□□□□□ -0.35
RAB5C-206ENST00000550406 OGNP20774 298 aaKnown RBP12.87□□□□□ -0.35
RAB5C-206ENST00000550406 DGKAP23743 735 aa12.87□□□□□ -0.35
RAB5C-206ENST00000550406 GABRB3P28472 473 aa12.87□□□□□ -0.35
RAB5C-206ENST00000550406 EPHA8P29322 1005 aaPredicted RBP12.87□□□□□ -0.35
RAB5C-206ENST00000550406 VSNL1P62760 191 aa12.87□□□□□ -0.35
RAB5C-206ENST00000550406 TUBB4BP68371 445 aa12.87□□□□□ -0.35
RAB5C-206ENST00000550406 CTBP1Q13363 440 aa12.87□□□□□ -0.35
RAB5C-206ENST00000550406 C1orf61Q13536 156 aa12.87□□□□□ -0.35
RAB5C-206ENST00000550406 ITIH4Q14624 930 aa12.87□□□□□ -0.35
RAB5C-206ENST00000550406 KYNUQ16719 465 aa12.87□□□□□ -0.35
RAB5C-206ENST00000550406 TYSND1Q2T9J0 566 aa12.87□□□□□ -0.35
RAB5C-206ENST00000550406 TEDDM1Q5T9Z0 273 aa12.87□□□□□ -0.35
RAB5C-206ENST00000550406 TMEM220Q6QAJ8 160 aa12.87□□□□□ -0.35
RAB5C-206ENST00000550406 CERS6Q6ZMG9 384 aa12.87□□□□□ -0.35
RAB5C-206ENST00000550406 DBX2Q6ZNG2 339 aa12.87□□□□□ -0.35
RAB5C-206ENST00000550406 CAPN12Q6ZSI9 719 aa12.87□□□□□ -0.35
RAB5C-206ENST00000550406 DET1Q7L5Y6 550 aa12.87□□□□□ -0.35
RAB5C-206ENST00000550406 NRROSQ86YC3 692 aa12.87□□□□□ -0.35
RAB5C-206ENST00000550406 GATAD2AQ86YP4 633 aa12.87□□□□□ -0.35
RAB5C-206ENST00000550406 CILP2Q8IUL8 1156 aa12.87□□□□□ -0.35
RAB5C-206ENST00000550406 CNTN4Q8IWV2 1026 aa12.87□□□□□ -0.35
RAB5C-206ENST00000550406 PALM2Q8IXS6 379 aa12.87□□□□□ -0.35
RAB5C-206ENST00000550406 OXR1Q8N573 874 aa12.87□□□□□ -0.35
RAB5C-206ENST00000550406 CLDN19Q8N6F1 224 aa12.87□□□□□ -0.35
RAB5C-206ENST00000550406 BEND7Q8N7W2 519 aaPredicted RBP12.87□□□□□ -0.35
RAB5C-206ENST00000550406 EIF1ADQ8N9N8 165 aaKnown RBP12.87□□□□□ -0.35
RAB5C-206ENST00000550406 GSDMBQ8TAX9 411 aa12.87□□□□□ -0.35
RAB5C-206ENST00000550406 CERS2Q96G23 380 aa12.87□□□□□ -0.35
RAB5C-206ENST00000550406 COPS8Q99627 209 aa12.87□□□□□ -0.35
RAB5C-206ENST00000550406 EDEM2Q9BV94 578 aa12.87□□□□□ -0.35
RAB5C-206ENST00000550406 LRRC61Q9BV99 259 aa12.87□□□□□ -0.35
RAB5C-206ENST00000550406 RMI1Q9H9A7 625 aa12.87□□□□□ -0.35
RAB5C-206ENST00000550406 NINJ2Q9NZG7 142 aa12.87□□□□□ -0.35
RAB5C-206ENST00000550406 GULP1Q9UBP9 304 aa12.87□□□□□ -0.35
RAB5C-206ENST00000550406 ZNHIT2Q9UHR6 403 aa12.87□□□□□ -0.35
RAB5C-206ENST00000550406 PRR19A6NJB7 356 aa12.86□□□□□ -0.35
RAB5C-206ENST00000550406 OR2AG2A6NM03 316 aa12.86□□□□□ -0.35
RAB5C-206ENST00000550406 C4orf47A7E2U8 309 aa12.86□□□□□ -0.35
RAB5C-206ENST00000550406 CXorf49A8MYA2 514 aaPredicted RBP12.86□□□□□ -0.35
RAB5C-206ENST00000550406 GPR89AB7ZAQ6 455 aa12.86□□□□□ -0.35
RAB5C-206ENST00000550406 DFNA5O60443 496 aa12.86□□□□□ -0.35
RAB5C-206ENST00000550406 PIAS1O75925 651 aa12.86□□□□□ -0.35
RAB5C-206ENST00000550406 GPR89BP0CG08 455 aa12.86□□□□□ -0.35
RAB5C-206ENST00000550406 ZNF883P0CG24 379 aa12.86□□□□□ -0.35
RAB5C-206ENST00000550406 AK4P27144 223 aaPredicted RBP12.86□□□□□ -0.35
RAB5C-206ENST00000550406 AKT1P31749 480 aa12.86□□□□□ -0.35
RAB5C-206ENST00000550406 SLC1A2P43004 574 aa12.86□□□□□ -0.35
RAB5C-206ENST00000550406 HNRNPKP61978 463 aaKnown RBP eCLIP12.86□□□□□ -0.35
RAB5C-206ENST00000550406 MPP1Q00013 466 aa12.86□□□□□ -0.35
RAB5C-206ENST00000550406 CTBSQ01459 385 aa12.86□□□□□ -0.35
RAB5C-206ENST00000550406 TCEA2Q15560 299 aa12.86□□□□□ -0.35
RAB5C-206ENST00000550406 AASDHQ4L235 1098 aaPredicted RBP12.86□□□□□ -0.35
RAB5C-206ENST00000550406 ZNF658BQ4V348 819 aaPredicted RBP12.86□□□□□ -0.35
RAB5C-206ENST00000550406 PRRT3Q5FWE3 981 aa12.86□□□□□ -0.35
RAB5C-206ENST00000550406 LYPLAL1Q5VWZ2 237 aa12.86□□□□□ -0.35
RAB5C-206ENST00000550406 ZNF470Q6ECI4 717 aa12.86□□□□□ -0.35
RAB5C-206ENST00000550406 MRNIPQ6NTE8 343 aa12.86□□□□□ -0.35
RAB5C-206ENST00000550406 CRTC3Q6UUV7 619 aa12.86□□□□□ -0.35
RAB5C-206ENST00000550406 PACS1Q6VY07 963 aa12.86□□□□□ -0.35
RAB5C-206ENST00000550406 C3orf62Q6ZUJ4 267 aa12.86□□□□□ -0.35
RAB5C-206ENST00000550406 CYS1Q717R9 158 aa12.86□□□□□ -0.35
RAB5C-206ENST00000550406 C2CD4AQ8NCU7 369 aaPredicted RBP12.86□□□□□ -0.35
RAB5C-206ENST00000550406 ZNF548Q8NEK5 533 aaPredicted RBP12.86□□□□□ -0.35
RAB5C-206ENST00000550406 GPBAR1Q8TDU6 330 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms