RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 DENND2DQ9H6A0 471 aaPredicted RBP6.22□□□□□ -1.41
TGFBR1-208ENST00000550253 ZNF304Q9HCX3 659 aa6.22□□□□□ -1.41
TGFBR1-208ENST00000550253 MLXIPLQ9NP71 852 aa6.22□□□□□ -1.41
TGFBR1-208ENST00000550253 AATFQ9NY61 560 aaKnown RBP eCLIP6.22□□□□□ -1.41
TGFBR1-208ENST00000550253 GDE1Q9NZC3 331 aa6.22□□□□□ -1.41
TGFBR1-208ENST00000550253 DNAJB9Q9UBS3 223 aa6.22□□□□□ -1.41
TGFBR1-208ENST00000550253 TNNQ9UQP3 1299 aa6.22□□□□□ -1.41
TGFBR1-208ENST00000550253 FRMD4BQ9Y2L6 1034 aa6.22□□□□□ -1.41
TGFBR1-208ENST00000550253 LRRC72A6NJI9 287 aa6.21□□□□□ -1.42
TGFBR1-208ENST00000550253 A6NL46 340 aa6.21□□□□□ -1.42
TGFBR1-208ENST00000550253 KLRF2D3W0D1 207 aa6.21□□□□□ -1.42
TGFBR1-208ENST00000550253 MSI1O43347 362 aaKnown RBP6.21□□□□□ -1.42
TGFBR1-208ENST00000550253 RECQL5O94762 991 aaPredicted RBP6.21□□□□□ -1.42
TGFBR1-208ENST00000550253 PEX11BO96011 259 aa6.21□□□□□ -1.42
TGFBR1-208ENST00000550253 HNRNPCP07910 306 aaKnown RBP eCLIP6.21□□□□□ -1.42
TGFBR1-208ENST00000550253 MMP9P14780 707 aa6.21□□□□□ -1.42
TGFBR1-208ENST00000550253 TACR2P21452 398 aa6.21□□□□□ -1.42
TGFBR1-208ENST00000550253 ITGB8P26012 769 aa6.21□□□□□ -1.42
TGFBR1-208ENST00000550253 ANP32AP39687 249 aaKnown RBP6.21□□□□□ -1.42
TGFBR1-208ENST00000550253 CLK1P49759 484 aaKnown RBP6.21□□□□□ -1.42
TGFBR1-208ENST00000550253 CCR3P51677 355 aa6.21□□□□□ -1.42
TGFBR1-208ENST00000550253 POLGP54098 1239 aaPredicted RBP6.21□□□□□ -1.42
TGFBR1-208ENST00000550253 IRX3P78415 501 aaPredicted RBP6.21□□□□□ -1.42
TGFBR1-208ENST00000550253 SHHQ15465 462 aa6.21□□□□□ -1.42
TGFBR1-208ENST00000550253 DAB2IPQ5VWQ8 1189 aa6.21□□□□□ -1.42
TGFBR1-208ENST00000550253 PET117Q6UWS5 81 aa6.21□□□□□ -1.42
TGFBR1-208ENST00000550253 TRIM72Q6ZMU5 477 aa6.21□□□□□ -1.42
TGFBR1-208ENST00000550253 RBM44Q6ZP01 1051 aaKnown RBP6.21□□□□□ -1.42
TGFBR1-208ENST00000550253 CCDC91Q7Z6B0 441 aa6.21□□□□□ -1.42
TGFBR1-208ENST00000550253 LRRC56Q8IYG6 542 aaPredicted RBP6.21□□□□□ -1.42
TGFBR1-208ENST00000550253 CCDC170Q8IYT3 715 aa6.21□□□□□ -1.42
TGFBR1-208ENST00000550253 Q8N3U1 123 aa6.21□□□□□ -1.42
TGFBR1-208ENST00000550253 SLC44A3Q8N4M1 653 aa6.21□□□□□ -1.42
TGFBR1-208ENST00000550253 MRPS27Q92552 414 aaKnown RBP6.21□□□□□ -1.42
TGFBR1-208ENST00000550253 FAM162AQ96A26 154 aa6.21□□□□□ -1.42
TGFBR1-208ENST00000550253 PAG1Q9NWQ8 432 aa6.21□□□□□ -1.42
TGFBR1-208ENST00000550253 CRNNQ9UBG3 495 aaPredicted RBP6.21□□□□□ -1.42
TGFBR1-208ENST00000550253 RAPGEFL1Q9UHV5 662 aa6.21□□□□□ -1.42
TGFBR1-208ENST00000550253 ST6GALNAC2Q9UJ37 374 aa6.21□□□□□ -1.42
TGFBR1-208ENST00000550253 NAV1Q8NEY1 1877 aa6.21□□□□□ -1.42
TGFBR1-208ENST00000550253 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 HSPB2A8KAH6 182 aa6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 H7C1Q1 480 aa6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 TADA2AO75478 443 aa6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 GCATO75600 419 aa6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 KLRC2P26717 231 aa6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 YWHAQP27348 245 aa6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 ACADLP28330 430 aa6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 TCF7P36402 384 aaPredicted RBP6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 DYNLL1P63167 89 aaKnown RBP6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 HOXA4Q00056 320 aaPredicted RBP6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 PKP1Q13835 747 aa6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 GALNT3Q14435 633 aa6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 HSPB2Q16082 182 aa6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 CDONQ4KMG0 1287 aa6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 MPP7Q5T2T1 576 aa6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 LRIF1Q5T3J3 769 aa6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 QSOX2Q6ZRP7 698 aa6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 SLC29A4Q7RTT9 530 aa6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 PIWIL3Q7Z3Z3 882 aaKnown RBP6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 NOXA1Q86UR1 476 aa6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 EPHX4Q8IUS5 362 aa6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 UEVLDQ8IX04 471 aa6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 NDUFAF2Q8N183 169 aa6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 TC2NQ8N9U0 490 aa6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 MGARPQ8TDB4 240 aa6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 WIPF2Q8TF74 440 aaPredicted RBP6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 NSMCE1Q8WV22 266 aa6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 HAS1Q92839 578 aa6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 PTERQ96BW5 349 aa6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 PPP1R13BQ96KQ4 1090 aa6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 BBC3Q96PG8 261 aaPredicted RBP6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 FCRL5Q96RD9 977 aa6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 MLST8Q9BVC4 326 aa6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 WDR6Q9NNW5 1121 aaKnown RBP6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 PFDN4Q9NQP4 134 aa6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 RAI14Q9P0K7 980 aa6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 GBF1Q92538 1859 aa6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 PLXNA1Q9UIW2 1896 aa6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 ZNFX1Q9P2E3 1918 aaKnown RBP6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 CYP2D7A0A087X1C5 515 aa6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 PSMA7O14818 248 aa6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 FMO6PO60774 539 aa6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 ASNSP08243 561 aa6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 PCNAP12004 261 aa6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 CYBAP13498 195 aa6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 FDPSP14324 419 aaKnown RBP6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 ST6GAL1P15907 406 aa6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 SRD5A1P18405 259 aa6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 MC5RP33032 325 aa6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 MPLP40238 635 aa6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 CCR10P46092 362 aa6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 CSE1LP55060 971 aaKnown RBP6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 TFAP4Q01664 338 aa6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 MTX1Q13505 466 aa6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 MVPQ14764 893 aaKnown RBP6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 HYAL4Q2M3T9 481 aa6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 USP39Q53GS9 565 aaKnown RBP6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 C6orf141Q5SZD1 244 aa6.2□□□□□ -1.42
TGFBR1-208ENST00000550253 TMEM198Q66K66 360 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms