RNA–Protein interactions for RNA: ENST00000547533.1

AC055716.3-201, humanhuman

TSL 3 BASIC

Gene AC055716.3, Length 761 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.3-201ENST00000547533 KMT5CQ86Y97 462 aa8.98□□□□□ -0.97
AC055716.3-201ENST00000547533 TRAM1L1Q8N609 369 aa8.98□□□□□ -0.97
AC055716.3-201ENST00000547533 NIPA2Q8N8Q9 360 aa8.98□□□□□ -0.97
AC055716.3-201ENST00000547533 GDAP1Q8TB36 358 aa8.98□□□□□ -0.97
AC055716.3-201ENST00000547533 BRSK1Q8TDC3 778 aa8.98□□□□□ -0.97
AC055716.3-201ENST00000547533 SLC25A23Q9BV35 468 aa8.98□□□□□ -0.97
AC055716.3-201ENST00000547533 GPR63Q9BZJ6 419 aa8.98□□□□□ -0.97
AC055716.3-201ENST00000547533 TRIM7Q9C029 511 aa8.98□□□□□ -0.97
AC055716.3-201ENST00000547533 FANCEQ9HB96 536 aa8.98□□□□□ -0.97
AC055716.3-201ENST00000547533 MAP10Q9P2G4 905 aa8.98□□□□□ -0.97
AC055716.3-201ENST00000547533 ATXN10Q9UBB4 475 aa8.98□□□□□ -0.97
AC055716.3-201ENST00000547533 ANAPC7Q9UJX3 599 aa8.98□□□□□ -0.97
AC055716.3-201ENST00000547533 DNAJC16Q9Y2G8 782 aa8.98□□□□□ -0.97
AC055716.3-201ENST00000547533 ZNF451Q9Y4E5 1061 aa8.98□□□□□ -0.97
AC055716.3-201ENST00000547533 PCDHGB7Q9Y5F8 929 aa8.98□□□□□ -0.97
AC055716.3-201ENST00000547533 BSNQ9UPA5 3926 aa8.98□□□□□ -0.97
AC055716.3-201ENST00000547533 TNRC6AQ8NDV7 1962 aaKnown RBP8.97□□□□□ -0.97
AC055716.3-201ENST00000547533 A0A0U1RQS6 177 aa8.97□□□□□ -0.97
AC055716.3-201ENST00000547533 UBA6A0AVT1 1052 aaPredicted RBP8.97□□□□□ -0.97
AC055716.3-201ENST00000547533 GOLGA6L3A6NEY3 463 aa8.97□□□□□ -0.97
AC055716.3-201ENST00000547533 SMTNL1A8MU46 457 aa8.97□□□□□ -0.97
AC055716.3-201ENST00000547533 FADS2P1A8MWK0 482 aa8.97□□□□□ -0.97
AC055716.3-201ENST00000547533 MFSD11O43934 449 aa8.97□□□□□ -0.97
AC055716.3-201ENST00000547533 KLHL41O60662 606 aa8.97□□□□□ -0.97
AC055716.3-201ENST00000547533 DPM1O60762 260 aa8.97□□□□□ -0.97
AC055716.3-201ENST00000547533 CPNE3O75131 537 aaKnown RBP8.97□□□□□ -0.97
AC055716.3-201ENST00000547533 CDK14O94921 469 aa8.97□□□□□ -0.97
AC055716.3-201ENST00000547533 DDAH2O95865 285 aa8.97□□□□□ -0.97
AC055716.3-201ENST00000547533 KLK3P07288 261 aaPredicted RBP8.97□□□□□ -0.97
AC055716.3-201ENST00000547533 NELFEP18615 380 aaKnown RBP8.97□□□□□ -0.97
AC055716.3-201ENST00000547533 NR1D1P20393 614 aa8.97□□□□□ -0.97
AC055716.3-201ENST00000547533 PRKCIP41743 596 aa8.97□□□□□ -0.97
AC055716.3-201ENST00000547533 CD86P42081 329 aa8.97□□□□□ -0.97
AC055716.3-201ENST00000547533 SH3BP2P78314 561 aa8.97□□□□□ -0.97
AC055716.3-201ENST00000547533 PAFAH1B3Q15102 231 aaKnown RBP8.97□□□□□ -0.97
AC055716.3-201ENST00000547533 PLCL1Q15111 1095 aa8.97□□□□□ -0.97
AC055716.3-201ENST00000547533 CHRNA6Q15825 494 aa8.97□□□□□ -0.97
AC055716.3-201ENST00000547533 UGT8Q16880 541 aa8.97□□□□□ -0.97
AC055716.3-201ENST00000547533 AGAP9Q5VTM2 703 aa8.97□□□□□ -0.97
AC055716.3-201ENST00000547533 ZDHHC20Q5W0Z9 365 aa8.97□□□□□ -0.97
AC055716.3-201ENST00000547533 ALS2CLQ60I27 953 aa8.97□□□□□ -0.97
AC055716.3-201ENST00000547533 CAPRIN2Q6IMN6 1127 aaKnown RBP8.97□□□□□ -0.97
AC055716.3-201ENST00000547533 WASH2PQ6VEQ5 465 aa8.97□□□□□ -0.97
AC055716.3-201ENST00000547533 ZNF571Q7Z3V5 609 aaPredicted RBP8.97□□□□□ -0.97
AC055716.3-201ENST00000547533 TRAPPC5Q8IUR0 188 aa8.97□□□□□ -0.97
AC055716.3-201ENST00000547533 OR8K5Q8NH50 307 aa8.97□□□□□ -0.97
AC055716.3-201ENST00000547533 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.97□□□□□ -0.97
AC055716.3-201ENST00000547533 MAML1Q92585 1016 aa8.97□□□□□ -0.97
AC055716.3-201ENST00000547533 GLYATL1Q969I3 302 aa8.97□□□□□ -0.97
AC055716.3-201ENST00000547533 TSGA13Q96PP4 275 aa8.97□□□□□ -0.97
AC055716.3-201ENST00000547533 GBP4Q96PP9 640 aa8.97□□□□□ -0.97
AC055716.3-201ENST00000547533 ZNF670Q9BS34 389 aa8.97□□□□□ -0.97
AC055716.3-201ENST00000547533 SYT11Q9BT88 431 aa8.97□□□□□ -0.97
AC055716.3-201ENST00000547533 NUP85Q9BW27 656 aa8.97□□□□□ -0.97
AC055716.3-201ENST00000547533 RAB33BQ9H082 229 aa8.97□□□□□ -0.97
AC055716.3-201ENST00000547533 BRD8Q9H0E9 1235 aa8.97□□□□□ -0.97
AC055716.3-201ENST00000547533 ISCUQ9H1K1 167 aa8.97□□□□□ -0.97
AC055716.3-201ENST00000547533 ACTL8Q9H568 366 aa8.97□□□□□ -0.97
AC055716.3-201ENST00000547533 MAGEE1Q9HCI5 957 aa8.97□□□□□ -0.97
AC055716.3-201ENST00000547533 SLC40A1Q9NP59 571 aa8.97□□□□□ -0.97
AC055716.3-201ENST00000547533 SLAMF7Q9NQ25 335 aa8.97□□□□□ -0.97
AC055716.3-201ENST00000547533 WASH6PQ9NQA3 447 aa8.97□□□□□ -0.97
AC055716.3-201ENST00000547533 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.97□□□□□ -0.97
AC055716.3-201ENST00000547533 EPHA6Q9UF33 1036 aa8.97□□□□□ -0.97
AC055716.3-201ENST00000547533 CNOT6Q9ULM6 557 aaKnown RBP8.97□□□□□ -0.97
AC055716.3-201ENST00000547533 PCDHGA9Q9Y5G4 932 aaKnown RBP8.97□□□□□ -0.97
AC055716.3-201ENST00000547533 NOTCH2Q04721 2471 aa8.97□□□□□ -0.97
AC055716.3-201ENST00000547533 PRRC2CQ9Y520 2896 aaKnown RBP8.96□□□□□ -0.97
AC055716.3-201ENST00000547533 CHUKO15111 745 aa8.96□□□□□ -0.98
AC055716.3-201ENST00000547533 SLC4A1P02730 911 aa8.96□□□□□ -0.98
AC055716.3-201ENST00000547533 HLA-DQB2P05538 268 aa8.96□□□□□ -0.98
AC055716.3-201ENST00000547533 ZNF28P17035 718 aa8.96□□□□□ -0.98
AC055716.3-201ENST00000547533 GNLYP22749 145 aa8.96□□□□□ -0.98
AC055716.3-201ENST00000547533 F8A1P23610 371 aa8.96□□□□□ -0.98
AC055716.3-201ENST00000547533 RPL10P27635 214 aaKnown RBP8.96□□□□□ -0.98
AC055716.3-201ENST00000547533 PTPN4P29074 926 aa8.96□□□□□ -0.98
AC055716.3-201ENST00000547533 GJC1P36383 396 aa8.96□□□□□ -0.98
AC055716.3-201ENST00000547533 SLC19A1P41440 591 aa8.96□□□□□ -0.98
AC055716.3-201ENST00000547533 LEPRP48357 1165 aaKnown RBP8.96□□□□□ -0.98
AC055716.3-201ENST00000547533 RRADP55042 308 aa8.96□□□□□ -0.98
AC055716.3-201ENST00000547533 GSDMDP57764 484 aa8.96□□□□□ -0.98
AC055716.3-201ENST00000547533 TPM4P67936 248 aa8.96□□□□□ -0.98
AC055716.3-201ENST00000547533 HSD11B2P80365 405 aa8.96□□□□□ -0.98
AC055716.3-201ENST00000547533 SLC25A11Q02978 314 aaKnown RBP8.96□□□□□ -0.98
AC055716.3-201ENST00000547533 GPR18Q14330 331 aa8.96□□□□□ -0.98
AC055716.3-201ENST00000547533 NFKBIBQ15653 356 aa8.96□□□□□ -0.98
AC055716.3-201ENST00000547533 QPCTQ16769 361 aa8.96□□□□□ -0.98
AC055716.3-201ENST00000547533 NCBP2-AS2Q69YL0 99 aa8.96□□□□□ -0.98
AC055716.3-201ENST00000547533 ABRAXAS1Q6UWZ7 409 aa8.96□□□□□ -0.98
AC055716.3-201ENST00000547533 RBM43Q6ZSC3 357 aaKnown RBP8.96□□□□□ -0.98
AC055716.3-201ENST00000547533 ADGRG6Q86SQ4 1221 aa8.96□□□□□ -0.98
AC055716.3-201ENST00000547533 TMEM126BQ8IUX1 230 aa8.96□□□□□ -0.98
AC055716.3-201ENST00000547533 BEND7Q8N7W2 519 aaPredicted RBP8.96□□□□□ -0.98
AC055716.3-201ENST00000547533 CT55Q8WUE5 264 aa8.96□□□□□ -0.98
AC055716.3-201ENST00000547533 KLHL6Q8WZ60 621 aa8.96□□□□□ -0.98
AC055716.3-201ENST00000547533 MR1Q95460 341 aa8.96□□□□□ -0.98
AC055716.3-201ENST00000547533 HDAC11Q96DB2 347 aa8.96□□□□□ -0.98
AC055716.3-201ENST00000547533 ZNF514Q96K75 400 aaPredicted RBP8.96□□□□□ -0.98
AC055716.3-201ENST00000547533 CD180Q99467 661 aa8.96□□□□□ -0.98
AC055716.3-201ENST00000547533 MAK16Q9BXY0 300 aaKnown RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms