RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 DNPEPQ9ULA0 475 aa12.63□□□□□ -0.39
USP28-212ENST00000544750 FER1L5A0AVI2 2057 aa12.63□□□□□ -0.39
USP28-212ENST00000544750 H3BRJ5 948 aa12.62□□□□□ -0.39
USP28-212ENST00000544750 CHUKO15111 745 aa12.62□□□□□ -0.39
USP28-212ENST00000544750 LDLRP01130 860 aa12.62□□□□□ -0.39
USP28-212ENST00000544750 BRAFP15056 766 aa12.62□□□□□ -0.39
USP28-212ENST00000544750 AMD1P17707 334 aa12.62□□□□□ -0.39
USP28-212ENST00000544750 PTPN4P29074 926 aa12.62□□□□□ -0.39
USP28-212ENST00000544750 PCK1P35558 622 aa12.62□□□□□ -0.39
USP28-212ENST00000544750 RPS18P62269 152 aaKnown RBP12.62□□□□□ -0.39
USP28-212ENST00000544750 CHAF1BQ13112 559 aa12.62□□□□□ -0.39
USP28-212ENST00000544750 CACHD1Q5VU97 1274 aa12.62□□□□□ -0.39
USP28-212ENST00000544750 PWWP2BQ6NUJ5 590 aa12.62□□□□□ -0.39
USP28-212ENST00000544750 JMJD6Q6NYC1 403 aaPredicted RBP12.62□□□□□ -0.39
USP28-212ENST00000544750 FAM199XQ6PEV8 388 aaPredicted RBP12.62□□□□□ -0.39
USP28-212ENST00000544750 ZNF517Q6ZMY9 492 aaPredicted RBP12.62□□□□□ -0.39
USP28-212ENST00000544750 ZNF571Q7Z3V5 609 aaPredicted RBP12.62□□□□□ -0.39
USP28-212ENST00000544750 PHYKPLQ8IUZ5 450 aa12.62□□□□□ -0.39
USP28-212ENST00000544750 ARRDC2Q8TBH0 407 aa12.62□□□□□ -0.39
USP28-212ENST00000544750 ADAMTS17Q8TE56 1095 aa12.62□□□□□ -0.39
USP28-212ENST00000544750 NSMCE1Q8WV22 266 aa12.62□□□□□ -0.39
USP28-212ENST00000544750 MAML1Q92585 1016 aa12.62□□□□□ -0.39
USP28-212ENST00000544750 EID2BQ96D98 161 aa12.62□□□□□ -0.39
USP28-212ENST00000544750 SLC41A2Q96JW4 573 aa12.62□□□□□ -0.39
USP28-212ENST00000544750 GPR87Q9BY21 358 aa12.62□□□□□ -0.39
USP28-212ENST00000544750 XPO4Q9C0E2 1151 aaKnown RBP12.62□□□□□ -0.39
USP28-212ENST00000544750 POLR1EQ9GZS1 481 aaKnown RBP12.62□□□□□ -0.39
USP28-212ENST00000544750 FAM83DQ9H4H8 585 aa12.62□□□□□ -0.39
USP28-212ENST00000544750 CASS4Q9NQ75 786 aa12.62□□□□□ -0.39
USP28-212ENST00000544750 DTLQ9NZJ0 730 aa12.62□□□□□ -0.39
USP28-212ENST00000544750 ERRFI1Q9UJM3 462 aaPredicted RBP12.62□□□□□ -0.39
USP28-212ENST00000544750 CHKBQ9Y259 395 aa12.62□□□□□ -0.39
USP28-212ENST00000544750 PCDHGB7Q9Y5F8 929 aa12.62□□□□□ -0.39
USP28-212ENST00000544750 A0A1W2PQJ5 194 aa12.61□□□□□ -0.39
USP28-212ENST00000544750 RGSL1A5PLK6 1076 aa12.61□□□□□ -0.39
USP28-212ENST00000544750 VIPP01282 170 aa12.61□□□□□ -0.39
USP28-212ENST00000544750 GYPCP04921 128 aa12.61□□□□□ -0.39
USP28-212ENST00000544750 LPOP22079 712 aaPredicted RBP12.61□□□□□ -0.39
USP28-212ENST00000544750 ARL4AP40617 200 aa12.61□□□□□ -0.39
USP28-212ENST00000544750 EPHB1P54762 984 aa12.61□□□□□ -0.39
USP28-212ENST00000544750 RPL26P61254 145 aaKnown RBP12.61□□□□□ -0.39
USP28-212ENST00000544750 DSC2Q02487 901 aa12.61□□□□□ -0.39
USP28-212ENST00000544750 ASIC2Q16515 512 aa12.61□□□□□ -0.39
USP28-212ENST00000544750 SMTNL2Q2TAL5 461 aa12.61□□□□□ -0.39
USP28-212ENST00000544750 ZNF648Q5T619 568 aaPredicted RBP12.61□□□□□ -0.39
USP28-212ENST00000544750 HGSNATQ68CP4 663 aa12.61□□□□□ -0.39
USP28-212ENST00000544750 PPP1R2P3Q6NXS1 205 aa12.61□□□□□ -0.39
USP28-212ENST00000544750 ABRAXAS1Q6UWZ7 409 aa12.61□□□□□ -0.39
USP28-212ENST00000544750 SYVN1Q86TM6 617 aa12.61□□□□□ -0.39
USP28-212ENST00000544750 LRRC49Q8IUZ0 686 aa12.61□□□□□ -0.39
USP28-212ENST00000544750 ING2Q9H160 280 aa12.61□□□□□ -0.39
USP28-212ENST00000544750 OR2AG1Q9H205 316 aa12.61□□□□□ -0.39
USP28-212ENST00000544750 HAUS4Q9H6D7 363 aa12.61□□□□□ -0.39
USP28-212ENST00000544750 SLC40A1Q9NP59 571 aa12.61□□□□□ -0.39
USP28-212ENST00000544750 IGSF5Q9NSI5 407 aa12.61□□□□□ -0.39
USP28-212ENST00000544750 POT1Q9NUX5 634 aa12.61□□□□□ -0.39
USP28-212ENST00000544750 RPL26L1Q9UNX3 145 aaKnown RBP12.61□□□□□ -0.39
USP28-212ENST00000544750 ANKRD12Q6UB98 2062 aa12.61□□□□□ -0.39
USP28-212ENST00000544750 CROCCQ5TZA2 2017 aa12.61□□□□□ -0.39
USP28-212ENST00000544750 APCP25054 2843 aa12.6□□□□□ -0.39
USP28-212ENST00000544750 IGHV5-51A0A0C4DH38 117 aa12.6□□□□□ -0.39
USP28-212ENST00000544750 C1orf232A0A0U1RR37 186 aa12.6□□□□□ -0.39
USP28-212ENST00000544750 ARGFXA6NJG6 315 aa12.6□□□□□ -0.39
USP28-212ENST00000544750 TMCO5BA8MYB1 307 aa12.6□□□□□ -0.39
USP28-212ENST00000544750 GPR89AB7ZAQ6 455 aa12.6□□□□□ -0.39
USP28-212ENST00000544750 DDX3XO00571 662 aaKnown RBP eCLIP12.6□□□□□ -0.391e-9■■■■□ 20
USP28-212ENST00000544750 RASSF9O75901 435 aa12.6□□□□□ -0.39
USP28-212ENST00000544750 CCDC172P0C7W6 258 aa12.6□□□□□ -0.39
USP28-212ENST00000544750 GPR89BP0CG08 455 aa12.6□□□□□ -0.39
USP28-212ENST00000544750 RARAP10276 462 aa12.6□□□□□ -0.39
USP28-212ENST00000544750 FOLR1P15328 257 aa12.6□□□□□ -0.39
USP28-212ENST00000544750 CES1P23141 567 aa12.6□□□□□ -0.39
USP28-212ENST00000544750 IL4RP24394 825 aa12.6□□□□□ -0.39
USP28-212ENST00000544750 SERPINB6P35237 376 aa12.6□□□□□ -0.39
USP28-212ENST00000544750 PTGIRP43119 386 aa12.6□□□□□ -0.39
USP28-212ENST00000544750 CCL11P51671 97 aa12.6□□□□□ -0.39
USP28-212ENST00000544750 PPP1CAP62136 330 aa12.6□□□□□ -0.39
USP28-212ENST00000544750 NIPAL4Q0D2K0 466 aa12.6□□□□□ -0.39
USP28-212ENST00000544750 GPR18Q14330 331 aa12.6□□□□□ -0.39
USP28-212ENST00000544750 CHRNA6Q15825 494 aa12.6□□□□□ -0.39
USP28-212ENST00000544750 BOLA3Q53S33 107 aa12.6□□□□□ -0.39
USP28-212ENST00000544750 TXNRD3NBQ6F5E7 133 aa12.6□□□□□ -0.39
USP28-212ENST00000544750 CYB5D1Q6P9G0 228 aa12.6□□□□□ -0.39
USP28-212ENST00000544750 WASH2PQ6VEQ5 465 aa12.6□□□□□ -0.39
USP28-212ENST00000544750 FAM92BQ6ZTR7 304 aa12.6□□□□□ -0.39
USP28-212ENST00000544750 ADGRG6Q86SQ4 1221 aa12.6□□□□□ -0.39
USP28-212ENST00000544750 ZGRF1Q86YA3 2104 aa12.6□□□□□ -0.39
USP28-212ENST00000544750 RBMXL3Q8N7X1 1067 aaKnown RBP12.6□□□□□ -0.39
USP28-212ENST00000544750 RNF214Q8ND24 703 aa12.6□□□□□ -0.39
USP28-212ENST00000544750 OSGEPL1Q9H4B0 414 aa12.6□□□□□ -0.39
USP28-212ENST00000544750 PCDH9Q9HC56 1237 aa12.6□□□□□ -0.39
USP28-212ENST00000544750 PCDH18Q9HCL0 1135 aa12.6□□□□□ -0.39
USP28-212ENST00000544750 TRIM39Q9HCM9 518 aa12.6□□□□□ -0.39
USP28-212ENST00000544750 PDE7BQ9NP56 450 aa12.6□□□□□ -0.39
USP28-212ENST00000544750 ARFGAP3Q9NP61 516 aa12.6□□□□□ -0.39
USP28-212ENST00000544750 WASH6PQ9NQA3 447 aa12.6□□□□□ -0.39
USP28-212ENST00000544750 PKD2L2Q9NZM6 624 aa12.6□□□□□ -0.39
USP28-212ENST00000544750 RARRES3Q9UL19 164 aa12.6□□□□□ -0.39
USP28-212ENST00000544750 ZNF451Q9Y4E5 1061 aa12.6□□□□□ -0.39
USP28-212ENST00000544750 FBN2P35556 2912 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms