RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 TBX5Q99593 518 aa15.33■□□□□ 0.04
CHD4-210ENST00000544040 AGO3Q9H9G7 860 aaKnown RBP15.33■□□□□ 0.04
CHD4-210ENST00000544040 SAGE2PA6NJ88 616 aa15.33■□□□□ 0.04
CHD4-210ENST00000544040 ADM5C9JUS6 153 aa15.33■□□□□ 0.04
CHD4-210ENST00000544040 ZNF806P0C7X5 589 aa15.33■□□□□ 0.04
CHD4-210ENST00000544040 MAPK8P45983 427 aa15.33■□□□□ 0.04
CHD4-210ENST00000544040 ELP6Q0PNE2 266 aa15.33■□□□□ 0.04
CHD4-210ENST00000544040 FAM110BQ8TC76 370 aa15.33■□□□□ 0.04
CHD4-210ENST00000544040 PIK3R3Q92569 461 aa15.33■□□□□ 0.04
CHD4-210ENST00000544040 HPF1Q9NWY4 346 aa15.33■□□□□ 0.04
CHD4-210ENST00000544040 FKBP7Q9Y680 259 aa15.33■□□□□ 0.04
CHD4-210ENST00000544040 QSOX1O00391 747 aa15.33■□□□□ 0.04
CHD4-210ENST00000544040 C22orf31O95567 290 aa15.33■□□□□ 0.04
CHD4-210ENST00000544040 LIX1Q8N485 282 aa15.33■□□□□ 0.04
CHD4-210ENST00000544040 OR10H4Q8NGA5 316 aa15.33■□□□□ 0.04
CHD4-210ENST00000544040 TNFRSF25Q93038 417 aa15.33■□□□□ 0.04
CHD4-210ENST00000544040 NODALQ96S42 347 aa15.33■□□□□ 0.04
CHD4-210ENST00000544040 ABHD16BQ9H3Z7 469 aa15.33■□□□□ 0.04
CHD4-210ENST00000544040 KCNQ5Q9NR82 932 aa15.33■□□□□ 0.04
CHD4-210ENST00000544040 COMMD3Q9UBI1 195 aa15.33■□□□□ 0.04
CHD4-210ENST00000544040 SMIM10L2AP0DMW4 78 aa15.32■□□□□ 0.04
CHD4-210ENST00000544040 SMIM10L2BP0DMW5 78 aa15.32■□□□□ 0.04
CHD4-210ENST00000544040 RYKP34925 604 aa15.32■□□□□ 0.04
CHD4-210ENST00000544040 CELF3Q5SZQ8 465 aaKnown RBP15.32■□□□□ 0.04
CHD4-210ENST00000544040 ZFPM1Q8IX07 1006 aa15.32■□□□□ 0.04
CHD4-210ENST00000544040 ZBTB2Q8N680 514 aa15.32■□□□□ 0.04
CHD4-210ENST00000544040 C7orf57Q8NEG2 295 aa15.32■□□□□ 0.04
CHD4-210ENST00000544040 OR4K2Q8NGD2 314 aa15.32■□□□□ 0.04
CHD4-210ENST00000544040 PTPN18Q99952 460 aa15.32■□□□□ 0.04
CHD4-210ENST00000544040 RHOJQ9H4E5 214 aa15.32■□□□□ 0.04
CHD4-210ENST00000544040 PCDH18Q9HCL0 1135 aa15.32■□□□□ 0.04
CHD4-210ENST00000544040 MFHAS1Q9Y4C4 1052 aa15.32■□□□□ 0.04
CHD4-210ENST00000544040 TET3O43151 1660 aa15.32■□□□□ 0.04
CHD4-210ENST00000544040 FABP12A6NFH5 140 aa15.32■□□□□ 0.04
CHD4-210ENST00000544040 SMAD9O15198 467 aaKnown RBP15.32■□□□□ 0.04
CHD4-210ENST00000544040 TGDSO95455 350 aa15.32■□□□□ 0.04
CHD4-210ENST00000544040 FGF1P05230 155 aa15.32■□□□□ 0.04
CHD4-210ENST00000544040 ATF6P18850 670 aa15.32■□□□□ 0.04
CHD4-210ENST00000544040 ALAS2P22557 587 aa15.32■□□□□ 0.04
CHD4-210ENST00000544040 AP3S2P59780 193 aa15.32■□□□□ 0.04
CHD4-210ENST00000544040 SLC20A2Q08357 652 aa15.32■□□□□ 0.04
CHD4-210ENST00000544040 PSMD5Q16401 504 aa15.32■□□□□ 0.04
CHD4-210ENST00000544040 C1orf189Q5VU69 101 aa15.32■□□□□ 0.04
CHD4-210ENST00000544040 PEX5LQ8IYB4 626 aa15.32■□□□□ 0.04
CHD4-210ENST00000544040 TTC29Q8NA56 475 aaPredicted RBP15.32■□□□□ 0.04
CHD4-210ENST00000544040 JSRP1Q96MG2 331 aaPredicted RBP15.32■□□□□ 0.04
CHD4-210ENST00000544040 CDT1Q9H211 546 aa15.32■□□□□ 0.04
CHD4-210ENST00000544040 EBF3Q9H4W6 596 aa15.32■□□□□ 0.04
CHD4-210ENST00000544040 PLK2Q9NYY3 685 aa15.32■□□□□ 0.04
CHD4-210ENST00000544040 MRPS23Q9Y3D9 190 aaKnown RBP15.32■□□□□ 0.04
CHD4-210ENST00000544040 CCL22O00626 93 aa15.32■□□□□ 0.04
CHD4-210ENST00000544040 ECHS1P30084 290 aa15.32■□□□□ 0.04
CHD4-210ENST00000544040 MATKP42679 507 aa15.32■□□□□ 0.04
CHD4-210ENST00000544040 RTP1P59025 263 aa15.32■□□□□ 0.04
CHD4-210ENST00000544040 FASTKD3Q14CZ7 662 aaKnown RBP15.32■□□□□ 0.04
CHD4-210ENST00000544040 IL17AQ16552 155 aa15.32■□□□□ 0.04
CHD4-210ENST00000544040 LAPTM4BQ86VI4 370 aa15.32■□□□□ 0.04
CHD4-210ENST00000544040 OR51V1Q9H2C8 321 aa15.32■□□□□ 0.04
CHD4-210ENST00000544040 CXorf21Q9HAI6 301 aa15.32■□□□□ 0.04
CHD4-210ENST00000544040 FSCN2O14926 492 aa15.32■□□□□ 0.04
CHD4-210ENST00000544040 FMO3P31513 532 aa15.32■□□□□ 0.04
CHD4-210ENST00000544040 MAGEA12P43365 314 aa15.32■□□□□ 0.04
CHD4-210ENST00000544040 GTF2BQ00403 316 aa15.32■□□□□ 0.04
CHD4-210ENST00000544040 DDR1Q08345 913 aa15.32■□□□□ 0.04
CHD4-210ENST00000544040 LARS2Q15031 903 aaKnown RBP15.32■□□□□ 0.04
CHD4-210ENST00000544040 TMEM161BQ8NDZ6 487 aa15.32■□□□□ 0.04
CHD4-210ENST00000544040 CHRAC1Q9NRG0 131 aa15.32■□□□□ 0.04
CHD4-210ENST00000544040 CRTC2Q53ET0 693 aaPredicted RBP15.32■□□□□ 0.04
CHD4-210ENST00000544040 RFWD3Q6PCD5 774 aa15.32■□□□□ 0.04
CHD4-210ENST00000544040 LRRC55Q6ZSA7 311 aa15.32■□□□□ 0.04
CHD4-210ENST00000544040 ZNF567Q8N184 647 aa15.32■□□□□ 0.04
CHD4-210ENST00000544040 TRIM2Q9C040 744 aa15.32■□□□□ 0.04
CHD4-210ENST00000544040 A0A1W2PQH9 124 aa15.31■□□□□ 0.04
CHD4-210ENST00000544040 RPP40O75818 363 aaKnown RBP15.31■□□□□ 0.04
CHD4-210ENST00000544040 PCCBP05166 539 aa15.31■□□□□ 0.04
CHD4-210ENST00000544040 LAMP2P13473 410 aa15.31■□□□□ 0.04
CHD4-210ENST00000544040 HSPA7P48741 367 aa15.31■□□□□ 0.04
CHD4-210ENST00000544040 RGS8P57771 180 aaPredicted RBP15.31■□□□□ 0.04
CHD4-210ENST00000544040 SMAD3P84022 425 aaKnown RBP15.31■□□□□ 0.04
CHD4-210ENST00000544040 CSTF1Q05048 431 aaKnown RBP15.31■□□□□ 0.04
CHD4-210ENST00000544040 IKBKEQ14164 716 aa15.31■□□□□ 0.04
CHD4-210ENST00000544040 CXCL17Q6UXB2 119 aa15.31■□□□□ 0.04
CHD4-210ENST00000544040 GALNT15Q8N3T1 639 aa15.31■□□□□ 0.04
CHD4-210ENST00000544040 DNAJA4Q8WW22 397 aaPredicted RBP15.31■□□□□ 0.04
CHD4-210ENST00000544040 SLC44A1Q8WWI5 657 aa15.31■□□□□ 0.04
CHD4-210ENST00000544040 CDCA5Q96FF9 252 aa15.31■□□□□ 0.04
CHD4-210ENST00000544040 ZC3H10Q96K80 434 aaKnown RBP15.31■□□□□ 0.04
CHD4-210ENST00000544040 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.31■□□□□ 0.04
CHD4-210ENST00000544040 C5orf51A6NDU8 294 aa15.31■□□□□ 0.04
CHD4-210ENST00000544040 GNB5O14775 395 aa15.31■□□□□ 0.04
CHD4-210ENST00000544040 SCAMP1O15126 338 aa15.31■□□□□ 0.04
CHD4-210ENST00000544040 CDH4P55283 916 aa15.31■□□□□ 0.04
CHD4-210ENST00000544040 ZNF460Q14592 562 aa15.31■□□□□ 0.04
CHD4-210ENST00000544040 TLR1Q15399 786 aa15.31■□□□□ 0.04
CHD4-210ENST00000544040 FITM2Q8N6M3 262 aa15.31■□□□□ 0.04
CHD4-210ENST00000544040 MAB21L3Q8N8X9 362 aa15.31■□□□□ 0.04
CHD4-210ENST00000544040 CCDC54Q8NEL0 328 aa15.31■□□□□ 0.04
CHD4-210ENST00000544040 UROC1Q96N76 676 aa15.31■□□□□ 0.04
CHD4-210ENST00000544040 MGME1Q9BQP7 344 aa15.31■□□□□ 0.04
CHD4-210ENST00000544040 IFT80Q9P2H3 777 aaPredicted RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms