RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 CERS6Q6ZMG9 384 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 CEP128Q6ZU80 1094 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 KCNMB4Q86W47 210 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 NAXDQ8IW45 347 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 ZNF548Q8NEK5 533 aaPredicted RBP6.24□□□□□ -1.41
LTBR-212ENST00000543542 FAM46DQ8NEK8 389 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 DDHD1Q8NEL9 900 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 FBXO25Q8TCJ0 367 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 CALML6Q8TD86 181 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 GLMNQ92990 594 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 LRRC39Q96DD0 335 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 TRIM56Q9BRZ2 755 aaKnown RBP6.24□□□□□ -1.41
LTBR-212ENST00000543542 DUSP23Q9BVJ7 150 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 TSSK1BQ9BXA7 367 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 CLPBQ9H078 707 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 TMEM168Q9H0V1 697 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 CCDC68Q9H2F9 335 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 DPEP2Q9H4A9 486 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 VPS37BQ9H9H4 285 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 L2HGDHQ9H9P8 463 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 GPR27Q9NS67 375 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 IARS2Q9NSE4 1012 aaKnown RBP6.24□□□□□ -1.41
LTBR-212ENST00000543542 KLC4Q9NSK0 619 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 TREX1Q9NSU2 369 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 EVA1BQ9NVM1 165 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 DNAAF2Q9NVR5 837 aaKnown RBP6.24□□□□□ -1.41
LTBR-212ENST00000543542 SMOXQ9NWM0 555 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 UCKL1Q9NWZ5 548 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 ZDHHC3Q9NYG2 299 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 GRHL1Q9NZI5 618 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 IL1RAPL1Q9NZN1 696 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 SIRPGQ9P1W8 387 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 GULP1Q9UBP9 304 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 DMGDHQ9UI17 866 aaKnown RBP6.24□□□□□ -1.41
LTBR-212ENST00000543542 KLF15Q9UIH9 416 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 CNOT6Q9ULM6 557 aaKnown RBP6.24□□□□□ -1.41
LTBR-212ENST00000543542 SLC17A4Q9Y2C5 497 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 DNAJC16Q9Y2G8 782 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 PCDHGB2Q9Y5G2 931 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 DGKBQ9Y6T7 804 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 FAM169AQ9Y6X4 670 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 USP34Q70CQ2 3546 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 LRP4O75096 1905 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 PLXNB3Q9ULL4 1909 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 DMDP11532 3685 aa6.24□□□□□ -1.41
LTBR-212ENST00000543542 PDZK1P1A8MUH7 402 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 B4DGG1 531 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 QSOX1O00391 747 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 EIF3HO15372 352 aaKnown RBP eCLIP6.23□□□□□ -1.41
LTBR-212ENST00000543542 SH3BP5O60239 455 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 PCDHGA12O60330 932 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 DNAJC6O75061 913 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 LDOC1O95751 146 aaPredicted RBP6.23□□□□□ -1.41
LTBR-212ENST00000543542 FTH1P02794 183 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 CELA2BP08218 269 aaPredicted RBP6.23□□□□□ -1.41
LTBR-212ENST00000543542 OR56A5P0C7T3 313 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 AK4P27144 223 aaPredicted RBP6.23□□□□□ -1.41
LTBR-212ENST00000543542 FOXN2P32314 431 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 NSG1P42857 185 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 MAGEA3P43357 314 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 MAGEA4P43358 317 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 CARSP49589 748 aaKnown RBP6.23□□□□□ -1.41
LTBR-212ENST00000543542 EIF3BP55884 814 aaKnown RBP6.23□□□□□ -1.41
LTBR-212ENST00000543542 TUBB4BP68371 445 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 CTBSQ01459 385 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 ACVR1Q04771 509 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 CUL1Q13616 776 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 LRP8Q14114 963 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 ITIH4Q14624 930 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 CRYMQ14894 314 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 SHBQ15464 509 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 TRADDQ15628 312 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 SEPT7Q16181 437 aaKnown RBP6.23□□□□□ -1.41
LTBR-212ENST00000543542 DBN1Q16643 649 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 RSPO4Q2I0M5 234 aaPredicted RBP6.23□□□□□ -1.41
LTBR-212ENST00000543542 SYTL3Q4VX76 610 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 PYCR3Q53H96 274 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 CCDC157Q569K6 752 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 HSP90AA5PQ58FG0 334 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 RNF187Q5TA31 235 aaPredicted RBP6.23□□□□□ -1.41
LTBR-212ENST00000543542 ZNF470Q6ECI4 717 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 NEPROQ6NW34 567 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 MICALCLQ6ZW33 695 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 LDB1Q86U70 411 aaPredicted RBP6.23□□□□□ -1.41
LTBR-212ENST00000543542 TMEM135Q86UB9 458 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 AMZ2Q86W34 360 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 PIANPQ8IYJ0 282 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 RASGEF1AQ8N9B8 481 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 LRRN4CLQ8ND94 238 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 GSDMBQ8TAX9 411 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 SAP25Q8TEE9 199 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 ZDHHC1Q8WTX9 485 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 NAT14Q8WUY8 206 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 UBXN4Q92575 508 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 CDKL2Q92772 493 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 SGF29Q96ES7 293 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 CERS2Q96G23 380 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 ZNF514Q96K75 400 aaPredicted RBP6.23□□□□□ -1.41
LTBR-212ENST00000543542 CNDP2Q96KP4 475 aaKnown RBP6.23□□□□□ -1.41
LTBR-212ENST00000543542 C9orf72Q96LT7 481 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms