RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 LPGAT1Q92604 370 aa22.82■■□□□ 1.24
HOMER3-205ENST00000542541 BOCQ9BWV1 1114 aa22.82■■□□□ 1.24
HOMER3-205ENST00000542541 CCDC68Q9H2F9 335 aa22.82■■□□□ 1.24
HOMER3-205ENST00000542541 KLQ9UEF7 1012 aa22.82■■□□□ 1.24
HOMER3-205ENST00000542541 CRYL1Q9Y2S2 319 aa22.82■■□□□ 1.24
HOMER3-205ENST00000542541 PCDHB1Q9Y5F3 818 aa22.82■■□□□ 1.24
HOMER3-205ENST00000542541 SDK1Q7Z5N4 2213 aa22.82■■□□□ 1.24
HOMER3-205ENST00000542541 NUAK1O60285 661 aa22.82■■□□□ 1.24
HOMER3-205ENST00000542541 OR1I1O60431 355 aa22.82■■□□□ 1.24
HOMER3-205ENST00000542541 PIAS1O75925 651 aa22.82■■□□□ 1.24
HOMER3-205ENST00000542541 HAUS5O94927 633 aa22.82■■□□□ 1.24
HOMER3-205ENST00000542541 ESR1P03372 595 aa22.82■■□□□ 1.24
HOMER3-205ENST00000542541 GP5P40197 560 aa22.82■■□□□ 1.24
HOMER3-205ENST00000542541 CD151P48509 253 aa22.82■■□□□ 1.24
HOMER3-205ENST00000542541 NXPH1P58417 271 aa22.82■■□□□ 1.24
HOMER3-205ENST00000542541 B4GALNT1Q00973 533 aa22.82■■□□□ 1.24
HOMER3-205ENST00000542541 PARGQ86W56 976 aa22.82■■□□□ 1.24
HOMER3-205ENST00000542541 RASGEF1AQ8N9B8 481 aa22.82■■□□□ 1.24
HOMER3-205ENST00000542541 FETUBQ9UGM5 382 aa22.82■■□□□ 1.24
HOMER3-205ENST00000542541 MOSPD1Q9UJG1 213 aa22.82■■□□□ 1.24
HOMER3-205ENST00000542541 GPR34Q9UPC5 381 aa22.82■■□□□ 1.24
HOMER3-205ENST00000542541 ANKRD6Q9Y2G4 727 aa22.82■■□□□ 1.24
HOMER3-205ENST00000542541 HCN4Q9Y3Q4 1203 aa22.82■■□□□ 1.24
HOMER3-205ENST00000542541 PSAT1Q9Y617 370 aa22.82■■□□□ 1.24
HOMER3-205ENST00000542541 CHUKO15111 745 aa22.81■■□□□ 1.24
HOMER3-205ENST00000542541 IVLP07476 585 aa22.81■■□□□ 1.24
HOMER3-205ENST00000542541 OR56A5P0C7T3 313 aa22.81■■□□□ 1.24
HOMER3-205ENST00000542541 H2AFXP16104 143 aaPredicted RBP22.81■■□□□ 1.24
HOMER3-205ENST00000542541 ZNF8P17098 575 aaPredicted RBP22.81■■□□□ 1.24
HOMER3-205ENST00000542541 POLD2P49005 469 aa22.81■■□□□ 1.24
HOMER3-205ENST00000542541 BLKP51451 505 aa22.81■■□□□ 1.24
HOMER3-205ENST00000542541 CSE1LP55060 971 aaKnown RBP22.81■■□□□ 1.24
HOMER3-205ENST00000542541 EIF3BP55884 814 aaKnown RBP22.81■■□□□ 1.24
HOMER3-205ENST00000542541 FZD2Q14332 565 aa22.81■■□□□ 1.24
HOMER3-205ENST00000542541 TPRG1LQ5T0D9 272 aa22.81■■□□□ 1.24
HOMER3-205ENST00000542541 GRTP1Q5TC63 336 aa22.81■■□□□ 1.24
HOMER3-205ENST00000542541 LAYNQ6UX15 382 aa22.81■■□□□ 1.24
HOMER3-205ENST00000542541 CLDN19Q8N6F1 224 aa22.81■■□□□ 1.24
HOMER3-205ENST00000542541 SGF29Q96ES7 293 aa22.81■■□□□ 1.24
HOMER3-205ENST00000542541 SCARF2Q96GP6 870 aaPredicted RBP22.81■■□□□ 1.24
HOMER3-205ENST00000542541 PPCSQ9HAB8 311 aa22.81■■□□□ 1.24
HOMER3-205ENST00000542541 FGF22Q9HCT0 170 aa22.81■■□□□ 1.24
HOMER3-205ENST00000542541 SLC17A6Q9P2U8 582 aa22.81■■□□□ 1.24
HOMER3-205ENST00000542541 GNPTGQ9UJJ9 305 aa22.81■■□□□ 1.24
HOMER3-205ENST00000542541 CORO1CQ9ULV4 474 aaPredicted RBP22.81■■□□□ 1.24
HOMER3-205ENST00000542541 COMMD10Q9Y6G5 202 aa22.81■■□□□ 1.24
HOMER3-205ENST00000542541 A0A1B0GVT2 93 aa22.8■■□□□ 1.24
HOMER3-205ENST00000542541 PRSS38A1L453 326 aa22.8■■□□□ 1.24
HOMER3-205ENST00000542541 H3BMM5 538 aa22.8■■□□□ 1.24
HOMER3-205ENST00000542541 CFIP05156 583 aa22.8■■□□□ 1.24
HOMER3-205ENST00000542541 RETP07949 1114 aa22.8■■□□□ 1.24
HOMER3-205ENST00000542541 INHBAP08476 426 aa22.8■■□□□ 1.24
HOMER3-205ENST00000542541 NUDT17P0C025 328 aa22.8■■□□□ 1.24
HOMER3-205ENST00000542541 GABRB3P28472 473 aa22.8■■□□□ 1.24
HOMER3-205ENST00000542541 FMO4P31512 558 aa22.8■■□□□ 1.24
HOMER3-205ENST00000542541 MPLP40238 635 aa22.8■■□□□ 1.24
HOMER3-205ENST00000542541 NBL1P41271 181 aa22.8■■□□□ 1.24
HOMER3-205ENST00000542541 MSH2P43246 934 aa22.8■■□□□ 1.24
HOMER3-205ENST00000542541 SRP54P61011 504 aaKnown RBP22.8■■□□□ 1.24
HOMER3-205ENST00000542541 PPARDQ03181 441 aa22.8■■□□□ 1.24
HOMER3-205ENST00000542541 ZNF789Q5FWF6 425 aa22.8■■□□□ 1.24
HOMER3-205ENST00000542541 PTRHD1Q6GMV3 140 aaKnown RBP22.8■■□□□ 1.24
HOMER3-205ENST00000542541 CNSTQ6PJW8 725 aa22.8■■□□□ 1.24
HOMER3-205ENST00000542541 TMEM220Q6QAJ8 160 aa22.8■■□□□ 1.24
HOMER3-205ENST00000542541 DET1Q7L5Y6 550 aa22.8■■□□□ 1.24
HOMER3-205ENST00000542541 CNPY4Q8N129 248 aa22.8■■□□□ 1.24
HOMER3-205ENST00000542541 SUMF1Q8NBK3 374 aa22.8■■□□□ 1.24
HOMER3-205ENST00000542541 TSSK1BQ9BXA7 367 aa22.8■■□□□ 1.24
HOMER3-205ENST00000542541 P2RY12Q9H244 342 aa22.8■■□□□ 1.24
HOMER3-205ENST00000542541 ARRDC1-AS1Q9H2J1 176 aa22.8■■□□□ 1.24
HOMER3-205ENST00000542541 ZNHIT2Q9UHR6 403 aa22.8■■□□□ 1.24
HOMER3-205ENST00000542541 SLC6A14Q9UN76 642 aa22.8■■□□□ 1.24
HOMER3-205ENST00000542541 DGKBQ9Y6T7 804 aa22.8■■□□□ 1.24
HOMER3-205ENST00000542541 POC1B-GALNT4F8VUJ3 575 aa22.79■■□□□ 1.24
HOMER3-205ENST00000542541 DNAJC6O75061 913 aa22.79■■□□□ 1.24
HOMER3-205ENST00000542541 RASGRP1O95267 797 aa22.79■■□□□ 1.24
HOMER3-205ENST00000542541 SPRP35270 261 aaPredicted RBP22.79■■□□□ 1.24
HOMER3-205ENST00000542541 EFTUD2Q15029 972 aaKnown RBP eCLIP22.79■■□□□ 1.242e-6■■■■■ 36.6
HOMER3-205ENST00000542541 SLC23A3Q6PIS1 610 aa22.79■■□□□ 1.24
HOMER3-205ENST00000542541 LRRTM4Q86VH4 590 aa22.79■■□□□ 1.24
HOMER3-205ENST00000542541 SPATS2Q86XZ4 545 aaKnown RBP22.79■■□□□ 1.24
HOMER3-205ENST00000542541 GALNT13Q8IUC8 556 aa22.79■■□□□ 1.24
HOMER3-205ENST00000542541 TRAPPC5Q8IUR0 188 aa22.79■■□□□ 1.24
HOMER3-205ENST00000542541 SLC44A1Q8WWI5 657 aa22.79■■□□□ 1.24
HOMER3-205ENST00000542541 MRRFQ96E11 262 aaKnown RBP22.79■■□□□ 1.24
HOMER3-205ENST00000542541 PAFAH2Q99487 392 aa22.79■■□□□ 1.24
HOMER3-205ENST00000542541 RHOJQ9H4E5 214 aa22.79■■□□□ 1.24
HOMER3-205ENST00000542541 ERVMER34-1Q9H9K5 563 aa22.79■■□□□ 1.24
HOMER3-205ENST00000542541 CYP4F12Q9HCS2 524 aa22.79■■□□□ 1.24
HOMER3-205ENST00000542541 GMEB2Q9UKD1 530 aa22.79■■□□□ 1.24
HOMER3-205ENST00000542541 SUFUQ9UMX1 484 aa22.79■■□□□ 1.24
HOMER3-205ENST00000542541 DNMT3AQ9Y6K1 912 aaPredicted RBP22.79■■□□□ 1.24
HOMER3-205ENST00000542541 OR2AG2A6NM03 316 aa22.79■■□□□ 1.24
HOMER3-205ENST00000542541 GRID2O43424 1007 aa22.79■■□□□ 1.24
HOMER3-205ENST00000542541 TNFP01375 233 aa22.79■■□□□ 1.24
HOMER3-205ENST00000542541 PKMP14618 531 aaKnown RBP22.79■■□□□ 1.24
HOMER3-205ENST00000542541 IFFO1Q0D2I5 559 aa22.79■■□□□ 1.24
HOMER3-205ENST00000542541 ALG11Q2TAA5 492 aa22.79■■□□□ 1.24
HOMER3-205ENST00000542541 BCL7AQ4VC05 210 aa22.79■■□□□ 1.24
HOMER3-205ENST00000542541 RD3Q7Z3Z2 195 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms