RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 DNAJB2P25686 324 aa15.19■□□□□ 0.02
CNOT9-208ENST00000542068 CDKN1CP49918 316 aaPredicted RBP15.19■□□□□ 0.02
CNOT9-208ENST00000542068 KPNA1P52294 538 aaPredicted RBP15.19■□□□□ 0.02
CNOT9-208ENST00000542068 KIAA0408Q6ZU52 694 aa15.19■□□□□ 0.02
CNOT9-208ENST00000542068 DCP1BQ8IZD4 617 aaKnown RBP15.19■□□□□ 0.02
CNOT9-208ENST00000542068 FEM1CQ96JP0 617 aa15.19■□□□□ 0.02
CNOT9-208ENST00000542068 NSMCE2Q96MF7 247 aa15.19■□□□□ 0.02
CNOT9-208ENST00000542068 NANOGQ9H9S0 305 aa15.19■□□□□ 0.02
CNOT9-208ENST00000542068 POLR3BQ9NW08 1133 aaPredicted RBP15.19■□□□□ 0.02
CNOT9-208ENST00000542068 FUOMA2VDF0 154 aa15.19■□□□□ 0.02
CNOT9-208ENST00000542068 CYBBP04839 570 aa15.19■□□□□ 0.02
CNOT9-208ENST00000542068 MLLT10P55197 1068 aa15.19■□□□□ 0.02
CNOT9-208ENST00000542068 RELAQ04206 551 aa15.19■□□□□ 0.02
CNOT9-208ENST00000542068 BNIP2Q12982 314 aa15.19■□□□□ 0.02
CNOT9-208ENST00000542068 MEP1AQ16819 746 aa15.19■□□□□ 0.02
CNOT9-208ENST00000542068 ZNF829Q3KNS6 432 aaPredicted RBP15.19■□□□□ 0.02
CNOT9-208ENST00000542068 BRMS1LQ5PSV4 323 aa15.19■□□□□ 0.02
CNOT9-208ENST00000542068 C8orf82Q6P1X6 216 aaPredicted RBP15.19■□□□□ 0.02
CNOT9-208ENST00000542068 FAM171BQ6P995 826 aa15.19■□□□□ 0.02
CNOT9-208ENST00000542068 BLOC1S3Q6QNY0 202 aa15.19■□□□□ 0.02
CNOT9-208ENST00000542068 DCDC5Q6ZRR9 648 aa15.19■□□□□ 0.02
CNOT9-208ENST00000542068 GABPB2Q8TAK5 448 aaPredicted RBP15.19■□□□□ 0.02
CNOT9-208ENST00000542068 SNX19Q92543 992 aa15.19■□□□□ 0.02
CNOT9-208ENST00000542068 ACDQ96AP0 544 aa15.19■□□□□ 0.02
CNOT9-208ENST00000542068 LHPPQ9H008 270 aa15.19■□□□□ 0.02
CNOT9-208ENST00000542068 SLC25A51Q9H1U9 297 aa15.19■□□□□ 0.02
CNOT9-208ENST00000542068 UTS2RQ9UKP6 389 aa15.19■□□□□ 0.02
CNOT9-208ENST00000542068 NEU3Q9UQ49 428 aa15.19■□□□□ 0.02
CNOT9-208ENST00000542068 OAS3Q9Y6K5 1087 aaKnown RBP15.19■□□□□ 0.02
CNOT9-208ENST00000542068 ASPDHA6ND91 283 aa15.18■□□□□ 0.02
CNOT9-208ENST00000542068 SNX2O60749 519 aa15.18■□□□□ 0.02
CNOT9-208ENST00000542068 ZNF189O75820 626 aaPredicted RBP15.18■□□□□ 0.02
CNOT9-208ENST00000542068 ITGB6P18564 788 aa15.18■□□□□ 0.02
CNOT9-208ENST00000542068 C18orf21Q32NC0 220 aaPredicted RBP15.18■□□□□ 0.02
CNOT9-208ENST00000542068 SGO1Q5FBB7 561 aa15.18■□□□□ 0.02
CNOT9-208ENST00000542068 MS4A13Q5J8X5 152 aa15.18■□□□□ 0.02
CNOT9-208ENST00000542068 VARS2Q5ST30 1063 aaKnown RBP15.18■□□□□ 0.02
CNOT9-208ENST00000542068 LCN8Q6JVE9 175 aa15.18■□□□□ 0.02
CNOT9-208ENST00000542068 LIMS2Q7Z4I7 341 aa15.18■□□□□ 0.02
CNOT9-208ENST00000542068 IFNL1Q8IU54 200 aa15.18■□□□□ 0.02
CNOT9-208ENST00000542068 SOCS4Q8WXH5 440 aa15.18■□□□□ 0.02
CNOT9-208ENST00000542068 TMBIM1Q969X1 311 aa15.18■□□□□ 0.02
CNOT9-208ENST00000542068 PGAP3Q96FM1 320 aaPredicted RBP15.18■□□□□ 0.02
CNOT9-208ENST00000542068 HGH1Q9BTY7 390 aa15.18■□□□□ 0.02
CNOT9-208ENST00000542068 TRMOQ9BU70 441 aa15.18■□□□□ 0.02
CNOT9-208ENST00000542068 RBMX2Q9Y388 322 aaKnown RBP15.18■□□□□ 0.02
CNOT9-208ENST00000542068 CFAP99D6REC4 459 aa15.18■□□□□ 0.02
CNOT9-208ENST00000542068 SLC22A3O75751 556 aa15.18■□□□□ 0.02
CNOT9-208ENST00000542068 MTHFD2P13995 350 aa15.18■□□□□ 0.02
CNOT9-208ENST00000542068 POLD2P49005 469 aa15.18■□□□□ 0.02
CNOT9-208ENST00000542068 RAD23AP54725 363 aa15.18■□□□□ 0.02
CNOT9-208ENST00000542068 LAPTM4AQ15012 233 aa15.18■□□□□ 0.02
CNOT9-208ENST00000542068 MAPK11Q15759 364 aa15.18■□□□□ 0.02
CNOT9-208ENST00000542068 CARTPTQ16568 116 aa15.18■□□□□ 0.02
CNOT9-208ENST00000542068 LINGO4Q6UY18 593 aa15.18■□□□□ 0.02
CNOT9-208ENST00000542068 R3HCC1LQ7Z5L2 792 aaKnown RBP15.18■□□□□ 0.02
CNOT9-208ENST00000542068 MON1AQ86VX9 555 aa15.18■□□□□ 0.02
CNOT9-208ENST00000542068 MINDY1Q8N5J2 469 aa15.18■□□□□ 0.02
CNOT9-208ENST00000542068 FAM86B1Q8N7N1 296 aa15.18■□□□□ 0.02
CNOT9-208ENST00000542068 CSNK1G1Q9HCP0 422 aa15.18■□□□□ 0.02
CNOT9-208ENST00000542068 ASB1Q9Y576 335 aa15.18■□□□□ 0.02
CNOT9-208ENST00000542068 PCDHA9Q9Y5H5 950 aa15.18■□□□□ 0.02
CNOT9-208ENST00000542068 A0A0G2JMZ2 1700 aa15.18■□□□□ 0.02
CNOT9-208ENST00000542068 NUP214P35658 2090 aaPredicted RBP15.18■□□□□ 0.02
CNOT9-208ENST00000542068 BBIP1A8MTZ0 92 aa15.18■□□□□ 0.02
CNOT9-208ENST00000542068 CACNG3O60359 315 aa15.18■□□□□ 0.02
CNOT9-208ENST00000542068 OR4F21O95013 312 aa15.18■□□□□ 0.02
CNOT9-208ENST00000542068 RPS24P62847 133 aaKnown RBP15.18■□□□□ 0.02
CNOT9-208ENST00000542068 TWF1Q12792 350 aa15.18■□□□□ 0.02
CNOT9-208ENST00000542068 PRMT9Q6P2P2 845 aa15.18■□□□□ 0.02
CNOT9-208ENST00000542068 TAS2R42Q7RTR8 314 aa15.18■□□□□ 0.02
CNOT9-208ENST00000542068 OR6K2Q8NGY2 324 aa15.18■□□□□ 0.02
CNOT9-208ENST00000542068 C17orf80Q9BSJ5 609 aa15.18■□□□□ 0.02
CNOT9-208ENST00000542068 SMOC2Q9H3U7 446 aa15.18■□□□□ 0.02
CNOT9-208ENST00000542068 NOL6Q9H6R4 1146 aaKnown RBP15.18■□□□□ 0.02
CNOT9-208ENST00000542068 INIPQ9NRY2 104 aa15.18■□□□□ 0.02
CNOT9-208ENST00000542068 EIF2B4Q9UI10 523 aaKnown RBP15.18■□□□□ 0.02
CNOT9-208ENST00000542068 PCDHB5Q9Y5E4 795 aa15.18■□□□□ 0.02
CNOT9-208ENST00000542068 PCDHGC4Q9Y5F7 938 aa15.18■□□□□ 0.02
CNOT9-208ENST00000542068 GPR39O43194 453 aa15.17■□□□□ 0.02
CNOT9-208ENST00000542068 ECI2O75521 394 aa15.17■□□□□ 0.02
CNOT9-208ENST00000542068 HSD17B1P14061 328 aa15.17■□□□□ 0.02
CNOT9-208ENST00000542068 ZNF37AP17032 561 aaPredicted RBP15.17■□□□□ 0.02
CNOT9-208ENST00000542068 AGXTP21549 392 aa15.17■□□□□ 0.02
CNOT9-208ENST00000542068 POLR2JP52435 117 aaKnown RBP15.17■□□□□ 0.02
CNOT9-208ENST00000542068 CCNYL2Q5T2Q4 361 aa15.17■□□□□ 0.02
CNOT9-208ENST00000542068 ANKS6Q68DC2 871 aa15.17■□□□□ 0.02
CNOT9-208ENST00000542068 HACD2Q6Y1H2 254 aa15.17■□□□□ 0.02
CNOT9-208ENST00000542068 ALDH16A1Q8IZ83 802 aa15.17■□□□□ 0.02
CNOT9-208ENST00000542068 SDCCAG3Q96C92 435 aa15.17■□□□□ 0.02
CNOT9-208ENST00000542068 GPR21Q99679 349 aa15.17■□□□□ 0.02
CNOT9-208ENST00000542068 SDR39U1Q9NRG7 319 aaPredicted RBP15.17■□□□□ 0.02
CNOT9-208ENST00000542068 ZMYM5Q9UJ78 669 aa15.17■□□□□ 0.02
CNOT9-208ENST00000542068 A0A1W2PP18 115 aa15.17■□□□□ 0.02
CNOT9-208ENST00000542068 TRIM43BA6NCK2 446 aa15.17■□□□□ 0.02
CNOT9-208ENST00000542068 MANSC4A6NHS7 340 aaPredicted RBP15.17■□□□□ 0.02
CNOT9-208ENST00000542068 GSTA4O15217 222 aa15.17■□□□□ 0.02
CNOT9-208ENST00000542068 TLR5O60602 858 aa15.17■□□□□ 0.02
CNOT9-208ENST00000542068 SNAP91O60641 907 aa15.17■□□□□ 0.02
CNOT9-208ENST00000542068 IDO1P14902 403 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms