RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 PGLYRP2Q96PD5 576 aa3.52□□□□□ -1.85
LEMD3-204ENST00000542032 ABHD1Q96SE0 405 aa3.52□□□□□ -1.85
LEMD3-204ENST00000542032 GLIS2Q9BZE0 524 aaPredicted RBP3.52□□□□□ -1.85
LEMD3-204ENST00000542032 PLEKHA4Q9H4M7 779 aa3.52□□□□□ -1.85
LEMD3-204ENST00000542032 MAGEE1Q9HCI5 957 aa3.52□□□□□ -1.85
LEMD3-204ENST00000542032 C20orf141Q9NUB4 165 aa3.52□□□□□ -1.85
LEMD3-204ENST00000542032 BLOC1S6Q9UL45 172 aa3.52□□□□□ -1.85
LEMD3-204ENST00000542032 VDAC3Q9Y277 283 aa3.52□□□□□ -1.85
LEMD3-204ENST00000542032 MTF2Q9Y483 593 aaPredicted RBP3.52□□□□□ -1.85
LEMD3-204ENST00000542032 IKBKGQ9Y6K9 419 aa3.52□□□□□ -1.85
LEMD3-204ENST00000542032 FAM169AQ9Y6X4 670 aa3.52□□□□□ -1.85
LEMD3-204ENST00000542032 ABCC9O60706 1549 aa3.52□□□□□ -1.85
LEMD3-204ENST00000542032 NOTCH3Q9UM47 2321 aa3.52□□□□□ -1.85
LEMD3-204ENST00000542032 FRMD3A2A2Y4 597 aa3.51□□□□□ -1.85
LEMD3-204ENST00000542032 LIPT2A6NK58 231 aa3.51□□□□□ -1.85
LEMD3-204ENST00000542032 A8MV72 311 aaPredicted RBP3.51□□□□□ -1.85
LEMD3-204ENST00000542032 PI4K2BG5E9Z4 385 aa3.51□□□□□ -1.85
LEMD3-204ENST00000542032 IFNL4K9M1U5 179 aa3.51□□□□□ -1.85
LEMD3-204ENST00000542032 TSPAN4O14817 238 aa3.51□□□□□ -1.85
LEMD3-204ENST00000542032 LDLRAD4O15165 306 aa3.51□□□□□ -1.85
LEMD3-204ENST00000542032 TACC1O75410 805 aa3.51□□□□□ -1.85
LEMD3-204ENST00000542032 OR2C1O95371 312 aa3.51□□□□□ -1.85
LEMD3-204ENST00000542032 TFP02787 698 aa3.51□□□□□ -1.85
LEMD3-204ENST00000542032 TUBBP07437 444 aa3.51□□□□□ -1.85
LEMD3-204ENST00000542032 SCG2P13521 617 aa3.51□□□□□ -1.85
LEMD3-204ENST00000542032 HLA-DOBP13765 273 aa3.51□□□□□ -1.85
LEMD3-204ENST00000542032 SELLP14151 372 aa3.51□□□□□ -1.85
LEMD3-204ENST00000542032 DDX5P17844 614 aaKnown RBP3.51□□□□□ -1.85
LEMD3-204ENST00000542032 TNNT2P45379 298 aaPredicted RBP3.51□□□□□ -1.85
LEMD3-204ENST00000542032 KRTAP10-12P60413 245 aa3.51□□□□□ -1.85
LEMD3-204ENST00000542032 SEC61BP60468 96 aaKnown RBP3.51□□□□□ -1.85
LEMD3-204ENST00000542032 SLC20A2Q08357 652 aa3.51□□□□□ -1.85
LEMD3-204ENST00000542032 TMEM115Q12893 351 aaPredicted RBP3.51□□□□□ -1.85
LEMD3-204ENST00000542032 AIMP1Q12904 312 aaKnown RBP3.51□□□□□ -1.85
LEMD3-204ENST00000542032 SLMAPQ14BN4 828 aa3.51□□□□□ -1.85
LEMD3-204ENST00000542032 PPP2R5BQ15173 497 aa3.51□□□□□ -1.85
LEMD3-204ENST00000542032 RNPS1Q15287 305 aaKnown RBP3.51□□□□□ -1.85
LEMD3-204ENST00000542032 RBBP5Q15291 538 aaKnown RBP3.51□□□□□ -1.85
LEMD3-204ENST00000542032 SYT16Q17RD7 645 aa3.51□□□□□ -1.85
LEMD3-204ENST00000542032 KRT24Q2M2I5 525 aa3.51□□□□□ -1.85
LEMD3-204ENST00000542032 TCTN1Q2MV58 587 aa3.51□□□□□ -1.85
LEMD3-204ENST00000542032 KRTCAP3Q53RY4 240 aa3.51□□□□□ -1.85
LEMD3-204ENST00000542032 STPG1Q5TH74 334 aa3.51□□□□□ -1.85
LEMD3-204ENST00000542032 GARNL3Q5VVW2 1013 aa3.51□□□□□ -1.85
LEMD3-204ENST00000542032 TTI2Q6NXR4 508 aa3.51□□□□□ -1.85
LEMD3-204ENST00000542032 ABRAXAS1Q6UWZ7 409 aa3.51□□□□□ -1.85
LEMD3-204ENST00000542032 CCNI2Q6ZMN8 369 aaPredicted RBP3.51□□□□□ -1.85
LEMD3-204ENST00000542032 CCDC73Q6ZRK6 1079 aa3.51□□□□□ -1.85
LEMD3-204ENST00000542032 SLFN11Q7Z7L1 901 aa3.51□□□□□ -1.85
LEMD3-204ENST00000542032 NLRP14Q86W24 1093 aa3.51□□□□□ -1.85
LEMD3-204ENST00000542032 CIARTQ8N365 385 aaPredicted RBP3.51□□□□□ -1.85
LEMD3-204ENST00000542032 KBTBD3Q8NAB2 608 aa3.51□□□□□ -1.85
LEMD3-204ENST00000542032 ZCCHC10Q8TBK6 192 aa3.51□□□□□ -1.85
LEMD3-204ENST00000542032 SCFD2Q8WU76 684 aa3.51□□□□□ -1.85
LEMD3-204ENST00000542032 RND1Q92730 232 aa3.51□□□□□ -1.85
LEMD3-204ENST00000542032 WDFY2Q96P53 400 aa3.51□□□□□ -1.85
LEMD3-204ENST00000542032 UHRF2Q96PU4 802 aa3.51□□□□□ -1.85
LEMD3-204ENST00000542032 SIN3AQ96ST3 1273 aa3.51□□□□□ -1.85
LEMD3-204ENST00000542032 HEMGNQ9BXL5 484 aa3.51□□□□□ -1.85
LEMD3-204ENST00000542032 NUF2Q9BZD4 464 aa3.51□□□□□ -1.85
LEMD3-204ENST00000542032 ST6GALNAC4Q9H4F1 302 aa3.51□□□□□ -1.85
LEMD3-204ENST00000542032 VEZTQ9HBM0 779 aa3.51□□□□□ -1.85
LEMD3-204ENST00000542032 MMP25Q9NPA2 562 aa3.51□□□□□ -1.85
LEMD3-204ENST00000542032 CNGB3Q9NQW8 809 aa3.51□□□□□ -1.85
LEMD3-204ENST00000542032 TMEM30AQ9NV96 361 aa3.51□□□□□ -1.85
LEMD3-204ENST00000542032 HPF1Q9NWY4 346 aa3.51□□□□□ -1.85
LEMD3-204ENST00000542032 TRMT1Q9NXH9 659 aaKnown RBP3.51□□□□□ -1.85
LEMD3-204ENST00000542032 CTNNAL1Q9UBT7 734 aa3.51□□□□□ -1.85
LEMD3-204ENST00000542032 LSM4Q9Y4Z0 139 aaKnown RBP3.51□□□□□ -1.85
LEMD3-204ENST00000542032 PCDHAC2Q9Y5I4 1007 aa3.51□□□□□ -1.85
LEMD3-204ENST00000542032 FAM237BA0A1B0GVD1 139 aa3.5□□□□□ -1.85
LEMD3-204ENST00000542032 A0A1W2PS18 150 aa3.5□□□□□ -1.85
LEMD3-204ENST00000542032 FAM172BPA6NC97 362 aa3.5□□□□□ -1.85
LEMD3-204ENST00000542032 GOLGA6L9A6NEM1 432 aa3.5□□□□□ -1.85
LEMD3-204ENST00000542032 TMEM202A6NGA9 273 aa3.5□□□□□ -1.85
LEMD3-204ENST00000542032 CCDC69A6NI79 296 aa3.5□□□□□ -1.85
LEMD3-204ENST00000542032 SLU7O95391 586 aaKnown RBP3.5□□□□□ -1.85
LEMD3-204ENST00000542032 ATP5BP06576 529 aaKnown RBP3.5□□□□□ -1.85
LEMD3-204ENST00000542032 CYC1P08574 325 aa3.5□□□□□ -1.85
LEMD3-204ENST00000542032 POU1F1P28069 291 aa3.5□□□□□ -1.85
LEMD3-204ENST00000542032 PSMB10P40306 273 aa3.5□□□□□ -1.85
LEMD3-204ENST00000542032 HSD17B4P51659 736 aa3.5□□□□□ -1.85
LEMD3-204ENST00000542032 RARSP54136 660 aaKnown RBP3.5□□□□□ -1.85
LEMD3-204ENST00000542032 UFM1P61960 85 aa3.5□□□□□ -1.85
LEMD3-204ENST00000542032 RBP5P82980 135 aa3.5□□□□□ -1.85
LEMD3-204ENST00000542032 RELQ04864 619 aaPredicted RBP3.5□□□□□ -1.85
LEMD3-204ENST00000542032 PRPF4BQ13523 1007 aaKnown RBP3.5□□□□□ -1.85
LEMD3-204ENST00000542032 VEPH1Q14D04 833 aa3.5□□□□□ -1.85
LEMD3-204ENST00000542032 PPA1Q15181 289 aa3.5□□□□□ -1.85
LEMD3-204ENST00000542032 HIST2H2ACQ16777 129 aaPredicted RBP3.5□□□□□ -1.85
LEMD3-204ENST00000542032 MRGPRG-AS1Q2M3A8 158 aa3.5□□□□□ -1.85
LEMD3-204ENST00000542032 ZNF674Q2M3X9 581 aa3.5□□□□□ -1.85
LEMD3-204ENST00000542032 C2orf68Q2NKX9 166 aa3.5□□□□□ -1.85
LEMD3-204ENST00000542032 ACCSLQ4AC99 568 aa3.5□□□□□ -1.85
LEMD3-204ENST00000542032 RAB12Q6IQ22 244 aa3.5□□□□□ -1.85
LEMD3-204ENST00000542032 WDR73Q6P4I2 378 aa3.5□□□□□ -1.85
LEMD3-204ENST00000542032 ALKBH5Q6P6C2 394 aaKnown RBP3.5□□□□□ -1.85
LEMD3-204ENST00000542032 FBXO46Q6PJ61 603 aaPredicted RBP3.5□□□□□ -1.85
LEMD3-204ENST00000542032 CYP20A1Q6UW02 462 aa3.5□□□□□ -1.85
LEMD3-204ENST00000542032 GFRALQ6UXV0 394 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms