RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 CRADDP78560 199 aa18.54■□□□□ 0.56
VPS33A-205ENST00000541169 DNTTIP2Q5QJE6 756 aaKnown RBP18.54■□□□□ 0.56
VPS33A-205ENST00000541169 C6orf132Q5T0Z8 1188 aa18.54■□□□□ 0.56
VPS33A-205ENST00000541169 RNF187Q5TA31 235 aaPredicted RBP18.54■□□□□ 0.56
VPS33A-205ENST00000541169 TAF8Q7Z7C8 310 aa18.54■□□□□ 0.56
VPS33A-205ENST00000541169 SDCCAG8Q86SQ7 713 aaPredicted RBP18.54■□□□□ 0.56
VPS33A-205ENST00000541169 EID2Q8N6I1 236 aa18.54■□□□□ 0.56
VPS33A-205ENST00000541169 AVL9Q8NBF6 648 aa18.54■□□□□ 0.56
VPS33A-205ENST00000541169 BAHD1Q8TBE0 780 aaPredicted RBP18.54■□□□□ 0.56
VPS33A-205ENST00000541169 CALML6Q8TD86 181 aa18.54■□□□□ 0.56
VPS33A-205ENST00000541169 TSPYL1Q9H0U9 437 aa18.54■□□□□ 0.56
VPS33A-205ENST00000541169 TMEM168Q9H0V1 697 aa18.54■□□□□ 0.56
VPS33A-205ENST00000541169 UCKL1Q9NWZ5 548 aa18.54■□□□□ 0.56
VPS33A-205ENST00000541169 SNX24Q9Y343 169 aa18.54■□□□□ 0.56
VPS33A-205ENST00000541169 MAD1L1Q9Y6D9 718 aa18.54■□□□□ 0.56
VPS33A-205ENST00000541169 TDRD6O60522 2096 aaKnown RBP18.53■□□□□ 0.56
VPS33A-205ENST00000541169 YY2O15391 372 aa18.53■□□□□ 0.56
VPS33A-205ENST00000541169 LDOC1O95751 146 aaPredicted RBP18.53■□□□□ 0.56
VPS33A-205ENST00000541169 GOT2P00505 430 aaKnown RBP18.53■□□□□ 0.56
VPS33A-205ENST00000541169 FUCA1P04066 466 aa18.53■□□□□ 0.56
VPS33A-205ENST00000541169 ATP1B2P14415 290 aaPredicted RBP18.53■□□□□ 0.56
VPS33A-205ENST00000541169 FOXN2P32314 431 aa18.53■□□□□ 0.56
VPS33A-205ENST00000541169 ID4P47928 161 aa18.53■□□□□ 0.56
VPS33A-205ENST00000541169 ARSDP51689 593 aa18.53■□□□□ 0.56
VPS33A-205ENST00000541169 ANKRD20A4Q4UJ75 823 aa18.53■□□□□ 0.56
VPS33A-205ENST00000541169 BCL7AQ4VC05 210 aa18.53■□□□□ 0.56
VPS33A-205ENST00000541169 CENPUQ71F23 418 aa18.53■□□□□ 0.56
VPS33A-205ENST00000541169 MARK2Q7KZI7 788 aaKnown RBP18.53■□□□□ 0.56
VPS33A-205ENST00000541169 SERPINA9Q86WD7 417 aa18.53■□□□□ 0.56
VPS33A-205ENST00000541169 GPR150Q8NGU9 434 aa18.53■□□□□ 0.56
VPS33A-205ENST00000541169 SEC14L1Q92503 715 aa18.53■□□□□ 0.56
VPS33A-205ENST00000541169 MFSD3Q96ES6 412 aa18.53■□□□□ 0.56
VPS33A-205ENST00000541169 ZNF778Q96MU6 729 aa18.53■□□□□ 0.56
VPS33A-205ENST00000541169 EBNA1BP2Q99848 306 aaKnown RBP18.53■□□□□ 0.56
VPS33A-205ENST00000541169 BOCQ9BWV1 1114 aa18.53■□□□□ 0.56
VPS33A-205ENST00000541169 CLPBQ9H078 707 aa18.53■□□□□ 0.56
VPS33A-205ENST00000541169 TCEAL2Q9H3H9 227 aaPredicted RBP18.53■□□□□ 0.56
VPS33A-205ENST00000541169 SUDS3Q9H7L9 328 aaPredicted RBP18.53■□□□□ 0.56
VPS33A-205ENST00000541169 L2HGDHQ9H9P8 463 aa18.53■□□□□ 0.56
VPS33A-205ENST00000541169 CATSPERZQ9NTU4 200 aa18.53■□□□□ 0.56
VPS33A-205ENST00000541169 RPS6KL1Q9Y6S9 549 aa18.53■□□□□ 0.56
VPS33A-205ENST00000541169 OR5K4A6NMS3 321 aa18.52■□□□□ 0.56
VPS33A-205ENST00000541169 CD3EAPO15446 510 aaKnown RBP18.52■□□□□ 0.56
VPS33A-205ENST00000541169 VAPBO95292 243 aa18.52■□□□□ 0.56
VPS33A-205ENST00000541169 ZNF7P17097 686 aaPredicted RBP18.52■□□□□ 0.56
VPS33A-205ENST00000541169 CKMT2P17540 419 aa18.52■□□□□ 0.56
VPS33A-205ENST00000541169 NMBRP28336 390 aa18.52■□□□□ 0.56
VPS33A-205ENST00000541169 CTBSQ01459 385 aa18.52■□□□□ 0.56
VPS33A-205ENST00000541169 ILKQ13418 452 aa18.52■□□□□ 0.56
VPS33A-205ENST00000541169 TRIP6Q15654 476 aaKnown RBP18.52■□□□□ 0.56
VPS33A-205ENST00000541169 LONRF1Q17RB8 773 aa18.52■□□□□ 0.56
VPS33A-205ENST00000541169 CHST15Q7LFX5 561 aaPredicted RBP18.52■□□□□ 0.56
VPS33A-205ENST00000541169 LRRC6Q86X45 466 aa18.52■□□□□ 0.56
VPS33A-205ENST00000541169 TRAPPC5Q8IUR0 188 aa18.52■□□□□ 0.56
VPS33A-205ENST00000541169 ARL10Q8N8L6 244 aa18.52■□□□□ 0.56
VPS33A-205ENST00000541169 RASGEF1AQ8N9B8 481 aa18.52■□□□□ 0.56
VPS33A-205ENST00000541169 FAM46DQ8NEK8 389 aa18.52■□□□□ 0.56
VPS33A-205ENST00000541169 ART4Q93070 314 aa18.52■□□□□ 0.56
VPS33A-205ENST00000541169 LINC00615Q96LM1 132 aaPredicted RBP18.52■□□□□ 0.56
VPS33A-205ENST00000541169 LRRC1Q9BTT6 524 aa18.52■□□□□ 0.56
VPS33A-205ENST00000541169 TSSK1BQ9BXA7 367 aa18.52■□□□□ 0.56
VPS33A-205ENST00000541169 FAM114A2Q9NRY5 505 aa18.52■□□□□ 0.56
VPS33A-205ENST00000541169 SLC2A6Q9UGQ3 507 aa18.52■□□□□ 0.56
VPS33A-205ENST00000541169 FAM169AQ9Y6X4 670 aa18.52■□□□□ 0.56
VPS33A-205ENST00000541169 PLXNB3Q9ULL4 1909 aa18.52■□□□□ 0.56
VPS33A-205ENST00000541169 C17orf113A0A1B0GUU1 675 aa18.51■□□□□ 0.55
VPS33A-205ENST00000541169 CCDC78A2IDD5 438 aa18.51■□□□□ 0.55
VPS33A-205ENST00000541169 E7ESA3 106 aa18.51■□□□□ 0.55
VPS33A-205ENST00000541169 CCL22O00626 93 aa18.51■□□□□ 0.55
VPS33A-205ENST00000541169 FFAR2O15552 330 aa18.51■□□□□ 0.55
VPS33A-205ENST00000541169 ZW10O43264 779 aa18.51■□□□□ 0.55
VPS33A-205ENST00000541169 SIGLEC6O43699 453 aa18.51■□□□□ 0.55
VPS33A-205ENST00000541169 GIMD1P0DJR0 217 aa18.51■□□□□ 0.55
VPS33A-205ENST00000541169 CKMT1AP12532 417 aa18.51■□□□□ 0.55
VPS33A-205ENST00000541169 OGNP20774 298 aaKnown RBP18.51■□□□□ 0.55
VPS33A-205ENST00000541169 PMLP29590 882 aa18.51■□□□□ 0.55
VPS33A-205ENST00000541169 ACTR1BP42025 376 aa18.51■□□□□ 0.55
VPS33A-205ENST00000541169 NOVA1P51513 510 aaKnown RBP18.51■□□□□ 0.55
VPS33A-205ENST00000541169 ACTR1AP61163 376 aa18.51■□□□□ 0.55
VPS33A-205ENST00000541169 DMPKQ09013 629 aa18.51■□□□□ 0.55
VPS33A-205ENST00000541169 ILF2Q12905 390 aaKnown RBP18.51■□□□□ 0.55
VPS33A-205ENST00000541169 C1orf61Q13536 156 aa18.51■□□□□ 0.55
VPS33A-205ENST00000541169 FRG1Q14331 258 aaKnown RBP18.51■□□□□ 0.55
VPS33A-205ENST00000541169 INSCQ1MX18 579 aa18.51■□□□□ 0.55
VPS33A-205ENST00000541169 DEFB133Q30KQ1 61 aa18.51■□□□□ 0.55
VPS33A-205ENST00000541169 PROX2Q3B8N5 592 aa18.51■□□□□ 0.55
VPS33A-205ENST00000541169 BBS9Q3SYG4 887 aa18.51■□□□□ 0.55
VPS33A-205ENST00000541169 SPANXN3Q5MJ09 141 aa18.51■□□□□ 0.55
VPS33A-205ENST00000541169 FNBP1LQ5T0N5 605 aa18.51■□□□□ 0.55
VPS33A-205ENST00000541169 ZNF449Q6P9G9 518 aa18.51■□□□□ 0.55
VPS33A-205ENST00000541169 OGFOD3Q6PK18 319 aa18.51■□□□□ 0.55
VPS33A-205ENST00000541169 AMZ2Q86W34 360 aa18.51■□□□□ 0.55
VPS33A-205ENST00000541169 BEND7Q8N7W2 519 aaPredicted RBP18.51■□□□□ 0.55
VPS33A-205ENST00000541169 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.51■□□□□ 0.55
VPS33A-205ENST00000541169 NAT6Q93015 286 aa18.51■□□□□ 0.55
VPS33A-205ENST00000541169 CNDP2Q96KP4 475 aaKnown RBP18.51■□□□□ 0.55
VPS33A-205ENST00000541169 DPH5Q9H2P9 285 aa18.51■□□□□ 0.55
VPS33A-205ENST00000541169 TAAR2Q9P1P5 351 aa18.51■□□□□ 0.55
VPS33A-205ENST00000541169 APOBEC2Q9Y235 224 aaKnown RBP18.51■□□□□ 0.55
VPS33A-205ENST00000541169 BTBD3Q9Y2F9 522 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms