RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 ZCWPW2A0A1B0GU75 182 aa17.31■□□□□ 0.36
CLSTN3-210ENST00000540931 TMEM202A6NGA9 273 aa17.31■□□□□ 0.36
CLSTN3-210ENST00000540931 FLRT2O43155 660 aa17.31■□□□□ 0.36
CLSTN3-210ENST00000540931 GRID2O43424 1007 aa17.31■□□□□ 0.36
CLSTN3-210ENST00000540931 UGT1A9O60656 530 aa17.31■□□□□ 0.36
CLSTN3-210ENST00000540931 NDUFS3O75489 264 aa17.31■□□□□ 0.36
CLSTN3-210ENST00000540931 ADRB1P08588 477 aa17.31■□□□□ 0.36
CLSTN3-210ENST00000540931 RHOXF2BP0C7M4 288 aa17.31■□□□□ 0.36
CLSTN3-210ENST00000540931 OR56A5P0C7T3 313 aa17.31■□□□□ 0.36
CLSTN3-210ENST00000540931 ATP1B2P14415 290 aaPredicted RBP17.31■□□□□ 0.36
CLSTN3-210ENST00000540931 UGT1A6P19224 532 aa17.31■□□□□ 0.36
CLSTN3-210ENST00000540931 UGT1A1P22309 533 aa17.31■□□□□ 0.36
CLSTN3-210ENST00000540931 UGT1A4P22310 534 aa17.31■□□□□ 0.36
CLSTN3-210ENST00000540931 UGT1A3P35503 534 aa17.31■□□□□ 0.36
CLSTN3-210ENST00000540931 UGT1A5P35504 534 aa17.31■□□□□ 0.36
CLSTN3-210ENST00000540931 ARCN1P48444 511 aaKnown RBP17.31■□□□□ 0.36
CLSTN3-210ENST00000540931 CLCNKAP51800 687 aa17.31■□□□□ 0.36
CLSTN3-210ENST00000540931 EIF2B5Q13144 721 aaKnown RBP17.31■□□□□ 0.36
CLSTN3-210ENST00000540931 PTPRCAPQ14761 206 aa17.31■□□□□ 0.36
CLSTN3-210ENST00000540931 ZDHHC24Q6UX98 284 aa17.31■□□□□ 0.36
CLSTN3-210ENST00000540931 GALNT7Q86SF2 657 aa17.31■□□□□ 0.36
CLSTN3-210ENST00000540931 ADGRG6Q86SQ4 1221 aa17.31■□□□□ 0.36
CLSTN3-210ENST00000540931 BEND7Q8N7W2 519 aaPredicted RBP17.31■□□□□ 0.36
CLSTN3-210ENST00000540931 AVL9Q8NBF6 648 aa17.31■□□□□ 0.36
CLSTN3-210ENST00000540931 NETO1Q8TDF5 533 aa17.31■□□□□ 0.36
CLSTN3-210ENST00000540931 GLMNQ92990 594 aa17.31■□□□□ 0.36
CLSTN3-210ENST00000540931 OR2M4Q96R27 311 aa17.31■□□□□ 0.36
CLSTN3-210ENST00000540931 RHOXF2Q9BQY4 288 aa17.31■□□□□ 0.36
CLSTN3-210ENST00000540931 TIMM29Q9BSF4 260 aa17.31■□□□□ 0.36
CLSTN3-210ENST00000540931 OR2AG1Q9H205 316 aa17.31■□□□□ 0.36
CLSTN3-210ENST00000540931 CARS2Q9HA77 564 aaKnown RBP17.31■□□□□ 0.36
CLSTN3-210ENST00000540931 UGT1A7Q9HAW7 530 aa17.31■□□□□ 0.36
CLSTN3-210ENST00000540931 UGT1A10Q9HAW8 530 aa17.31■□□□□ 0.36
CLSTN3-210ENST00000540931 UGT1A8Q9HAW9 530 aa17.31■□□□□ 0.36
CLSTN3-210ENST00000540931 CYP4F12Q9HCS2 524 aa17.31■□□□□ 0.36
CLSTN3-210ENST00000540931 SAYSD1Q9NPB0 183 aa17.31■□□□□ 0.36
CLSTN3-210ENST00000540931 C20orf96Q9NUD7 363 aaPredicted RBP17.31■□□□□ 0.36
CLSTN3-210ENST00000540931 SLC2A6Q9UGQ3 507 aa17.31■□□□□ 0.36
CLSTN3-210ENST00000540931 DOLKQ9UPQ8 538 aa17.31■□□□□ 0.36
CLSTN3-210ENST00000540931 PCDHB1Q9Y5F3 818 aa17.31■□□□□ 0.36
CLSTN3-210ENST00000540931 C17orf113A0A1B0GUU1 675 aa17.3■□□□□ 0.36
CLSTN3-210ENST00000540931 ESYT3A0FGR9 886 aa17.3■□□□□ 0.36
CLSTN3-210ENST00000540931 KPNA5O15131 536 aa17.3■□□□□ 0.36
CLSTN3-210ENST00000540931 AQP9O43315 295 aa17.3■□□□□ 0.36
CLSTN3-210ENST00000540931 PIAS2O75928 621 aa17.3■□□□□ 0.36
CLSTN3-210ENST00000540931 FTH1P02794 183 aa17.3■□□□□ 0.36
CLSTN3-210ENST00000540931 EPHA8P29322 1005 aaPredicted RBP17.3■□□□□ 0.36
CLSTN3-210ENST00000540931 MAGEA4P43358 317 aa17.3■□□□□ 0.36
CLSTN3-210ENST00000540931 ARSDP51689 593 aa17.3■□□□□ 0.36
CLSTN3-210ENST00000540931 BNC1Q01954 994 aa17.3■□□□□ 0.36
CLSTN3-210ENST00000540931 SF3A2Q15428 464 aaKnown RBP17.3■□□□□ 0.36
CLSTN3-210ENST00000540931 ALG11Q2TAA5 492 aa17.3■□□□□ 0.36
CLSTN3-210ENST00000540931 BCL7AQ4VC05 210 aa17.3■□□□□ 0.36
CLSTN3-210ENST00000540931 PYCR3Q53H96 274 aa17.3■□□□□ 0.36
CLSTN3-210ENST00000540931 KCNMB4Q86W47 210 aa17.3■□□□□ 0.36
CLSTN3-210ENST00000540931 CCDC25Q86WR0 208 aa17.3■□□□□ 0.36
CLSTN3-210ENST00000540931 PELI3Q8N2H9 469 aa17.3■□□□□ 0.36
CLSTN3-210ENST00000540931 CERS2Q96G23 380 aa17.3■□□□□ 0.36
CLSTN3-210ENST00000540931 LINC00615Q96LM1 132 aaPredicted RBP17.3■□□□□ 0.36
CLSTN3-210ENST00000540931 PANX3Q96QZ0 392 aa17.3■□□□□ 0.36
CLSTN3-210ENST00000540931 CLPBQ9H078 707 aa17.3■□□□□ 0.36
CLSTN3-210ENST00000540931 SUDS3Q9H7L9 328 aaPredicted RBP17.3■□□□□ 0.36
CLSTN3-210ENST00000540931 FGF22Q9HCT0 170 aa17.3■□□□□ 0.36
CLSTN3-210ENST00000540931 ATXN10Q9UBB4 475 aa17.3■□□□□ 0.36
CLSTN3-210ENST00000540931 ZNHIT2Q9UHR6 403 aa17.3■□□□□ 0.36
CLSTN3-210ENST00000540931 CORO1CQ9ULV4 474 aaPredicted RBP17.3■□□□□ 0.36
CLSTN3-210ENST00000540931 SUFUQ9UMX1 484 aa17.3■□□□□ 0.36
CLSTN3-210ENST00000540931 CHMP2BQ9UQN3 213 aa17.3■□□□□ 0.36
CLSTN3-210ENST00000540931 CCDC78A2IDD5 438 aa17.29■□□□□ 0.36
CLSTN3-210ENST00000540931 LMO7DNF2Z398 122 aa17.29■□□□□ 0.36
CLSTN3-210ENST00000540931 PRMT5O14744 637 aaPredicted RBP17.29■□□□□ 0.36
CLSTN3-210ENST00000540931 SCAMP1O15126 338 aa17.29■□□□□ 0.36
CLSTN3-210ENST00000540931 DNAJC6O75061 913 aa17.29■□□□□ 0.36
CLSTN3-210ENST00000540931 ANXA6P08133 673 aa17.29■□□□□ 0.36
CLSTN3-210ENST00000540931 RPS3P23396 243 aaKnown RBP eCLIP17.29■□□□□ 0.365e-7■■■■□ 23.9
CLSTN3-210ENST00000540931 STX2P32856 288 aa17.29■□□□□ 0.36
CLSTN3-210ENST00000540931 GRK6P43250 576 aa17.29■□□□□ 0.36
CLSTN3-210ENST00000540931 CCDC6Q16204 474 aa17.29■□□□□ 0.36
CLSTN3-210ENST00000540931 TYSND1Q2T9J0 566 aa17.29■□□□□ 0.36
CLSTN3-210ENST00000540931 MSS51Q4VC12 460 aa17.29■□□□□ 0.36
CLSTN3-210ENST00000540931 PRRT3Q5FWE3 981 aa17.29■□□□□ 0.36
CLSTN3-210ENST00000540931 DOK6Q6PKX4 331 aa17.29■□□□□ 0.36
CLSTN3-210ENST00000540931 LAYNQ6UX15 382 aa17.29■□□□□ 0.36
CLSTN3-210ENST00000540931 UNC5AQ6ZN44 842 aa17.29■□□□□ 0.36
CLSTN3-210ENST00000540931 DBX2Q6ZNG2 339 aa17.29■□□□□ 0.36
CLSTN3-210ENST00000540931 CILP2Q8IUL8 1156 aa17.29■□□□□ 0.36
CLSTN3-210ENST00000540931 TRAPPC5Q8IUR0 188 aa17.29■□□□□ 0.36
CLSTN3-210ENST00000540931 SAP25Q8TEE9 199 aa17.29■□□□□ 0.36
CLSTN3-210ENST00000540931 OR1E3Q8WZA6 343 aa17.29■□□□□ 0.36
CLSTN3-210ENST00000540931 CCDC68Q9H2F9 335 aa17.29■□□□□ 0.36
CLSTN3-210ENST00000540931 NLGN3Q9NZ94 848 aa17.29■□□□□ 0.36
CLSTN3-210ENST00000540931 TMEM98Q9Y2Y6 226 aa17.29■□□□□ 0.36
CLSTN3-210ENST00000540931 GPSM3Q9Y4H4 160 aa17.29■□□□□ 0.36
CLSTN3-210ENST00000540931 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.29■□□□□ 0.36
CLSTN3-210ENST00000540931 PCDH15Q96QU1 1955 aa17.29■□□□□ 0.36
CLSTN3-210ENST00000540931 USP24Q9UPU5 2620 aa17.28■□□□□ 0.36
CLSTN3-210ENST00000540931 OR5K4A6NMS3 321 aa17.28■□□□□ 0.36
CLSTN3-210ENST00000540931 SLC30A4O14863 429 aa17.28■□□□□ 0.36
CLSTN3-210ENST00000540931 ESR1P03372 595 aa17.28■□□□□ 0.36
CLSTN3-210ENST00000540931 ZNF8P17098 575 aaPredicted RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms